Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > DF21/S192 > Z30233 > FGC3903/S5201 > S5199 > Z246 > DF25 > DF5 > ZZ32 > L1403 > L1402 > A818

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
359286
BigY2
359286
13687793-C-A 11532117-C-A A*
13687027-C-A 11531351-C-A A*
13687705-C-A 11532029-C-A A*
19615865-A-T 17503985-A-T P5_Prx Y***A*
24272748-G-T 22126601-G-T P3_b1 ***A*
24274409-G-C 22128262-G-C P3_b1 ***A*
22486615-G-T 20324729-G-T BY224828 DYZ19 ++
21469947-G-A 19308061-G-A S23127 YY++
22235521-G-A 20073635-G-A BY213632 DYZ19 +
18625804-C-G 16513924-C-G BY122672 Y**+
2888630-G-A 3020589-G-A BY57107 YY**+
17945957-T-C 15834077-T-C BY118635 YY++
17935007-T-G 15823127-T-G BY118535 YY++
15753570-T-C 13641690-T-C BY103853 YY++
13705281-G-C 11549605-G-C BY89147 ***+
9386241-A-G 9548632-A-G Y+**
18043250-C-A 15931370-C-A BY119399 YY++
2724873-C-T 2856832-C-T BY56024 YY++
22271183-G-T 20109297-G-T BY52268 DYZ19 ++
7274-A-C +
23207585-C-T 21045699-C-T BY143811 Y++
22255069-G-C 20093183-G-C DYZ19 ****
14009330-T-G 11888624-T-G **
14216233-C-A 12095527-C-A **
14011164-C-A 11890458-C-A **
14021220-C-A 11900514-C-A **
14030308-T-G 11909602-T-G **
14215012-C-A 12094306-C-A **
14196343-A-G 12075637-A-G **
14196344-GA-G 12075638-GA-G **
14187080-T-G 12066374-T-G **
14184559-C-A 12063853-C-A **
14122610-T-A 12001904-T-A **
14118274-A-T 11997568-A-T **
14080166-G-T 11959460-G-T **
14076058-G-T 11955352-G-T **
14050113-C-A 11929407-C-A **
9221717-C-A 9384108-C-A **
13975871-T-G 11855165-T-G **
13989123-T-A 11868417-T-A **
11656727-G-T **
13316630-C-A 11160954-C-A **
13321601-T-C 11165925-T-C **
13385254-T-TA 11229578-T-TA **
13442087-C-A 11286411-C-A **
13445380-AG-A 11289704-AG-A **
13469546-C-A 11313870-C-A **
13520794-C-A 11365118-C-A **
13567208-T-C 11411532-T-C **
13596508-T-C 11440832-T-C **
13617480-C-A 11461804-C-A **
13631531-C-A 11475855-C-A **
11646193-G-T **
11648852-A-C **
11652056-C-G **
11656773-A-T **
14245183-C-A 12124477-C-A Z37920 **
11671925-A-C **
11672011-A-C **
11673167-A-G **
11675716-G-T **
13855659-C-A 11734953-C-A **
13880851-G-T 11760145-G-T **
13880853-G-T 11760147-G-T **
13880868-G-T 11760162-G-T **
13896289-T-C 11775583-T-C **
13899252-C-A 11778546-C-A **
13936000-C-A 11815294-C-A **
13941613-G-A 11820907-G-A **
13942479-C-A 11821773-C-A **
13952529-C-A 11831823-C-A **
14218427-C-A 12097721-C-A **
14389992-T-G 12269288-T-G **
14279450-C-A 12158744-C-A **
15358609-A-T 13246728-A-T **
14912076-C-A 12800143-C-A **
14977287-T-G 12865362-T-G **
14981795-A-T 12869871-A-T **
14981803-T-C 12869879-T-C **
14994285-C-A 12882370-C-A **
15084088-C-A 12972178-C-A **
15119485-A-C 13007572-A-C **
15185626-G-T 13073712-G-T **
15324171-C-A 13212289-C-A **
15346985-G-C 13235104-G-C **
15382842-C-G 13270962-C-G **
14788077-A-G 12676148-A-G **
15400418-C-A 13288538-C-A **
15456985-G-C 13345105-G-C **
15542038-G-T 13430158-G-T **
15576701-T-G 13464821-T-G **
15576702-G-T 13464822-G-T **
15599482-C-A 13487602-C-A **
15608140-G-T 13496260-G-T **
15619086-T-A 13507206-T-A **
15636054-T-A 13524174-T-A **
15679782-A-G 13567902-A-G **
15778666-T-C 13666786-T-C **
14848994-C-A 12737060-C-A **
14788069-GT-G 12676140-GT-G **
14283210-C-A 12162504-C-A **
14511884-C-A 12400089-C-A **
14284136-T-G 12163430-T-G **
14285972-C-T 12165266-C-T **
14315541-C-A 12194835-C-A **
14343999-A-G 12223294-A-G **
14366796-A-T 12246091-A-T **
14366799-C-T 12246094-C-T Y91210 **
14376138-C-A 12255434-C-A **
13273060-C-A 11117384-C-A **
14446612-G-C 12325885-G-C **
14461045-C-A 12340318-C-A **
14468267-C-A 12347536-C-A **
14519509-C-A 12407710-C-A **
14788059-C-T 12676130-C-T **
14589855-C-A 12478055-C-A **
14667749-G-C 12555814-G-C **
14689113-C-A 12577179-C-A **
14696914-C-A 12584980-C-A **
14700583-C-A 12588649-C-A **
14714972-G-T 12603039-G-T **
14715089-G-T 12603156-G-T **
14727354-G-A 12615422-G-A **
14780856-C-T 12668926-C-T **
14786409-G-A 12674479-G-A **
14788055-T-C 12676126-T-C **
13307195-C-A 11151519-C-A **
11018521-A-G **
13236270-A-G 11080594-A-G **
10773619-C-A **
10685531-C-T **
10687555-C-A **
10746437-G-C **
10746444-T-A **
10746461-A-T **
10746490-A-T **
10747888-A-C **
10754834-C-A **
10762645-C-T **
10766230-C-A **
10778297-CATT-C **
10672025-A-C **
10778302-CAT-C **
10782821-G-A **
10787398-G-C **
10787406-A-C **
10787411-A-C **
10788795-T-C **
10790295-A-T **
10792929-G-C **
10796189-C-CTCTTT **
10798471-C-A **
10798472-A-C **
10679467-T-G **
10671455-C-T **
10804015-G-T **
10082115-G-A 10244506-G-A **
10081996-T-C 10244387-T-C **
10082024-A-T 10244415-A-T **
10082036-C-T 10244427-C-T **
10082045-T-A 10244436-T-A **
10082062-G-C 10244453-G-C **
10082067-G-A 10244458-G-A **
10082069-A-T 10244460-A-T **
10082081-GT-A 10244472-GT-A **
10082096-G-T 10244487-G-T **
10082097-C-A 10244488-C-A **
10082121-A-G 10244512-A-G **
10667575-TC-T **
10082128-C-A 10244519-C-A **
10082137-A-C 10244528-A-C **
10645999-C-T **
10652600-G-C **
10652795-C-A **
10653103-C-A **
10656399-C-A **
10658724-G-T **
10659937-T-C **
10661067-C-T **
10661070-T-C **
10803456-C-A **
10809442-C-T **
13228870-C-A 11073194-C-A **
10993913-C-A **
10977505-C-A **
10977555-C-T **
10983660-C-A **
10984923-C-A **
10989443-T-G **
10989460-C-T **
10989496-C-T **
10989510-A-T **
10990340-C-T **
10990344-T-C **
11011180-C-A **
10964702-C-A **
11013489-TTCCAC-T **
15786512-A-T 13674632-A-T **
11031413-TTCCAC-T **
11033255-C-A **
11034561-C-G **
11034890-T-C **
13205344-C-T 11049668-C-T **
13205456-C-A 11049780-C-A **
13218013-A-G 11062337-A-G **
13228226-G-C 11072550-G-C **
13228233-G-C 11072557-G-C **
10971510-T-C **
10964474-G-T **
10809444-A-C **
10864650-A-G **
10814971-C-A **
10817832-C-A **
10833872-A-C **
10841167-C-A **
10845760-C-T **
10845763-T-G **
10845771-C-T **
10845781-C-G **
10860096-C-A **
10864325-A-C **
10874630-C-A **
10959545-A-G **
10878676-T-C **
10880765-C-A **
10887449-A-C **
10892595-T-G **
10893862-A-C **
10895165-C-A **
10895171-A-C **
10925418-C-A **
10938576-T-A **
10942845-C-A **
10955214-G-C **
15786039-GGCCTAT-G 13674159-GGCCTAT-G **
16018907-A-G 13907027-A-G **
15786635-A-T 13674755-A-T **
22801609-C-A 20639723-C-A **
22171513-AT-A 20009627-AT-A **
22172232-G-T 20010346-G-T **
22172425-G-T 20010539-G-T **
22204314-T-C 20042428-T-C **
22234178-G-A 20072292-G-A DYZ19 **
22689976-A-T 20528090-A-T **
22732626-A-T 20570740-A-T **
22776938-A-C 20615052-A-C **
22776963-T-C 20615077-T-C **
22777034-A-C 20615148-A-C **
22838652-C-A 20676766-C-A **
22166593-G-T 20004707-G-T **
22843771-G-T 20681885-G-T **
22854181-G-T 20692295-G-T Y27490 **
22963733-G-A 20801847-G-A **
23044208-C-A 20882322-C-A **
23062596-C-A 20900710-C-A **
23066666-G-T 20904780-G-T **
23066812-G-T 20904926-G-T **
23206938-C-A 21045052-C-A **
23355409-C-A 21193523-C-A **
23435890-G-T 21274004-G-T **
22171226-AG-A 20009340-AG-A **
22123044-A-T 19961158-A-T **
23440701-G-C 21278815-G-C **
21791215-G-T 19629329-G-T **
21187820-T-C 19025934-T-C **
21195868-C-A 19033982-C-A **
21263621-C-A 19101735-C-A **
21323534-C-A 19161648-C-A **
21334536-C-A 19172650-C-A **
21544760-C-A 19382874-C-A **
21582563-C-A 19420677-C-A **
21651641-A-T 19489755-A-T **
21700349-C-A 19538463-C-A **
21743429-C-A 19581543-C-A **
21793521-G-T 19631635-G-T **
22097086-C-A 19935200-C-A **
21793657-C-A 19631771-C-A **
21809966-C-A 19648080-C-A **
21813797-T-G 19651911-T-G **
21858256-T-A 19696370-T-A **
21858257-GAT-G 19696371-GAT-G **
21959158-C-A 19797272-C-A **
21993968-C-A 19832082-C-A **
22055538-T-A 19893652-T-A **
22093145-A-C 19931259-A-C **
22093157-A-T 19931271-A-T **
22093162-C-G 19931276-C-G **
23439016-T-G 21277130-T-G **
23441370-C-A 21279484-C-A **
21134885-A-C 18972999-A-C **
28658302-C-T 26512155-C-T **
28498152-C-A 26352005-C-A **
28506192-C-A 26360045-C-A **
28519005-C-A 26372858-C-A **
28521724-T-A 26375577-T-A **
28533814-C-A 26387667-C-A **
28533816-G-A 26387669-G-A **
28546893-C-A 26400746-C-A **
28618249-C-A 26472102-C-A **
28623461-C-T 26477314-C-T **
28650066-G-T 26503919-G-T **
28659802-C-A 26513655-C-A **
28024706-A-AG 25878559-A-AG P1_Y2 **
28665418-C-A 26519271-C-A **
28706321-C-A 26560174-C-A **
28719964-T-G 26573817-T-G **
28720040-G-C 26573893-G-C **
28731346-G-T 26585199-G-T **
28755880-C-A 26609733-C-A **
28760835-C-A 26614688-C-A **
28761338-G-A 26615191-G-A **
56835285-C-G **
56840886-G-T **
56848563-G-T **
28429399-T-C 26283252-T-C P1_gr2 **
28022533-T-C 25876386-T-C P1_Y2 **
23448506-A-G 21286620-A-G **
24403396-T-C 22257249-T-C **
23448620-T-C 21286734-T-C **
23448621-G-A 21286735-G-A **
23475300-G-A 21313414-G-A **
23603113-C-A 21441227-C-A **
23603144-T-G 21441258-T-G **
23603152-T-G 21441266-T-G **
24070734-A-G 21924587-A-G P3_b1 **
24070748-T-A 21924601-T-A P3_b1 **
24070754-T-A 21924607-T-A P3_b1 **
24371853-G-T 22225706-G-T **
24416887-G-A 22270740-G-A **
27791955-T-C 25645808-T-C P1_Y2 **
24671173-G-A 22525026-G-A P3_b2 **
25892409-A-AC 23746262-A-AC P1_Y1 **
25973609-A-G 23827462-A-G P1_Y1 **
26025028-T-G 23878881-T-G P1_Y1 **
26043744-A-T 23897597-A-T P1_Y1 **
26247636-A-C 24101489-A-C P1_Y1 **
26386365-C-A 24240218-C-A P1_Y1 **
26544765-A-C 24398618-A-C P1_g2 **
27263178-T-G 25117031-T-G P1_g3 **
27417748-G-T 25271601-G-T P1_g3 **
27535337-T-G 25389190-T-G P1_Y2 **
21156852-A-T 18994966-A-T **
21031276-C-T 18869390-C-T P4_Dst **
15816359-A-C 13704479-A-C **
16945479-G-A 14833599-G-A **
16629333-C-A 14517453-C-A **
16629335-C-CAA 14517455-C-CAA 19×A**
16706468-A-T 14594588-A-T **
16742913-CCAGGTTCCTGCAAATTAGAAAATGGTAG-C 14631033-CCAGGTTCCTGCAAATTAGAAAATGGTAG-C **
16750142-A-G 14638262-A-G **
16784371-C-G 14672491-C-G **
16848505-C-G 14736625-C-G **
16920123-G-A 14808243-G-A **
16930168-G-A 14818288-G-A **
16933225-C-A 14821345-C-A **
16945498-G-T 14833618-G-T **
16522982-C-A 14411102-C-A **
17030585-T-A 14918705-T-A **
17039031-A-C 14927151-A-C **
17081251-A-T 14969371-A-T **
17100360-CTGGGA-C 14988480-CTGGGA-C **
17117438-G-T 15005558-G-T **
17225941-C-A 15114061-C-A **
17239273-T-C 15127393-T-C **
17355592-G-T 15243712-G-T **
17367597-C-A 15255717-C-A **
17374768-A-C 15262888-A-C **
17440430-A-T 15328550-A-T **
16624042-G-C 14512162-G-C **
16430580-T-C 14318700-T-C **
17589147-C-A 15477267-C-A **
16054128-A-G 13942248-A-G **
15832180-C-A 13720300-C-A **
15918882-T-C 13807002-T-C **
15921170-G-A 13809290-G-A **
15936737-G-C 13824857-G-C **
15941378-C-A 13829498-C-A **
15971269-C-A 13859389-C-A **
15995136-G-A 13883256-G-A **
16008094-G-T 13896214-G-T **
10056434-C-A 10218825-C-A **
16028588-C-A 13916708-C-A **
16089772-C-A 13977892-C-A **
16424676-G-C 14312796-G-C **
16184120-T-A 14072240-T-A **
16259164-AT-A 14147284-AT-A **
16324097-C-A 14212217-C-A **
16342421-A-C 14230541-A-C **
16342427-G-T 14230547-G-T **
16342435-G-C 14230555-G-C **
16342452-A-G 14230572-A-G **
16342458-A-G 14230578-A-G **
16342462-GACAA-G 14230582-GACAA-G **
16342478-A-G 14230598-A-G **
16351552-A-T 14239672-A-T **
17498877-C-A 15386997-C-A **
17633769-C-A 15521889-C-A **
20781441-A-G 18619555-A-G P4_Prx **
19301795-C-A 17189915-C-A **
18987104-C-A 16875224-C-A **
19037824-T-G 16925944-T-G **
19056425-C-A 16944545-C-A **
19075276-A-G 16963396-A-G **
19084713-G-A 16972833-G-A **
19113714-T-C 17001834-T-C **
19129731-C-T 17017851-C-T **
19202925-T-A 17091045-T-A **
19213845-C-A 17101965-C-A **
19226598-A-C 17114718-A-C **
19330156-G-T 17218276-G-T **
18923953-C-G 16812073-C-G **
19462182-TC-T 17350302-TC-T **
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19479741-A-G 17367861-A-G **
19563180-C-A 17451300-C-A **
19751134-C-A 17639254-C-A P5_Prx **
19932026-T-G 17820146-T-G P5_Prx **
20241143-T-TG 18079257-T-TG P5_Dst **
20305550-A-AG 18143664-A-AG P5_Dst **
20634073-G-T 18472187-G-T P4_Prx **
20668429-T-C 18506543-T-C P4_Prx **
20757113-T-C 18595227-T-C P4_Prx **
18966231-T-G 16854351-T-G **
18869864-G-A 16757984-G-A **
17673059-C-A 15561179-C-A **
18100973-A-C 15989093-A-C **
17685818-A-C 15573938-A-C **
17795663-T-C 15683783-T-C **
17795700-G-C 15683820-G-C **
17795708-T-C 15683828-T-C **
17882849-C-A 15770969-C-A **
17886623-C-A 15774743-C-A **
17928684-C-A 15816804-C-A **
18040440-G-T 15928560-G-T **
18085985-G-T 15974105-G-T **
18086834-A-T 15974954-A-T **
18101023-C-T 15989143-C-T **
18869000-C-A 16757120-C-A **
18134548-G-T 16022668-G-T **
18190655-A-T 16078775-A-T **
18192506-C-A 16080626-C-A **
18194533-C-A 16082653-C-A **
18196307-G-T 16084427-G-T **
18390014-T-A 16278134-T-A P6_Gap **
18407179-C-A 16295299-C-A P6_Gap **
18611537-G-T 16499657-G-T **
18754831-A-C 16642951-A-C **
18756350-C-G 16644470-C-G **
18780487-A-G 16668607-A-G **
10081990-A-G 10244381-A-G **
10082066-T-C 10244457-T-C **
10032829-C-A 10195220-C-A **
56843758-G-C **
24407103-G-T 22260956-G-T **
10983748-C-A **
7645202-ATTTTT-A 7777161-ATTTTT-A 17×T**
16015791-C-A 13903911-C-A **
22653311-C-A 20491425-C-A **
28530812-C-A 26384665-C-A **
23523651-C-T 21361765-C-T **
23807560-G-A 21645674-G-A **
10746522-A-C **
18263836-T-A 16151956-T-A **
10796181-C-G **
5687519-C-A 5819478-C-A **
10652647-G-T **
17929086-C-A 15817206-C-A **
10989491-C-AA **
24671167-T-A 22525020-T-A P3_b2 **
10747976-C-T **
10805485-G-T **
17004618-C-A 14892738-C-A 14×A**
10796194-C-T **
21182397-C-T 19020511-C-T 20×T**
3728720-G-T 3860679-G-T **
14558666-C-A 12446867-C-A **
10764624-C-T **
3550572-C-T 3682531-C-T **
14352872-C-A 12232167-C-A **
13962083-A-C 11841377-A-C **
10906084-G-T **
20242509-C-T 18080623-C-T P5_Dst **
14514110-C-A 12402315-C-A **
14544044-C-A 12432245-C-A **
25246442-T-C 23100295-T-C P2_r1 **
17151381-C-A 15039501-C-A **
25990661-AG-T 23844514-AG-T P1_Y1 **
19361263-G-A 17249383-G-A **
10973977-C-T **
10983690-C-A **
28559012-C-A 26412865-C-A **
21408298-C-A 19246412-C-A **
14648605-C-A 12536670-C-A **
10973968-A-G **
10973983-AGTCC-A **
10973991-C-CATGT **
21115897-C-A 18954011-C-A **
13878581-T-A 11757875-T-A **
8568507-A-T 8700466-A-T **
22800179-G-T 20638293-G-T **
16926143-C-A 14814263-C-A **
22123020-C-A 19961134-C-A **
3275647-C-A 3407606-C-A **
3990633-T-C 4122592-T-C **
15685319-G-C 13573439-G-C **
10778276-C-T **
23881929-G-T 21720043-G-T **
13228224-A-C 11072548-A-C **
15733015-G-A 13621135-G-A **
11011512-G-T **
19056342-TA-T 16944462-TA-T **
10973941-TCCAC-T **
10973949-AC-A **
10941462-C-T **
10889977-G-T **
10944784-C-A **
26161193-T-TG 24015046-T-TG P1_Y1 **
5409878-A-G 5541837-A-G **
8568501-A-G 8700460-A-G **
26010214-G-T 23864067-G-T P1_Y1 **
5061127-G-T 5193086-G-T **
10821964-C-A **
28482995-T-C 26336848-T-C **
19031532-C-A 16919652-C-A **
10859955-C-A **
15397050-G-T 13285170-G-T **
23488831-C-T 21326945-C-T **
10865524-C-A **
10973976-C-T **
21092252-C-A 18930366-C-A **
23465924-G-T 21304038-G-T **
8344304-G-T 8476263-G-T Y86548 **
13253221-A-C 11097545-A-C **
6855474-C-A 6987433-C-A **
27936327-A-AG 25790180-A-AG P1_Y2 **
7670943-C-A 7802902-C-A **
13496544-TTAAAA-T 11340868-TTAAAA-T **
3347492-C-A 3479451-C-A **
10007698-C-A 10170089-C-A **
17315307-C-A 15203427-C-A **
18923958-T-G 16812078-T-G **
14485369-G-T 12364638-G-T **
6063278-C-A 6195237-C-A **
18340599-G-T 16228719-G-T P6_Prx **
21863680-C-A 19701794-C-A **
11005136-C-A **
15185221-C-A 13073307-C-A **
28808580-T-G 26662433-T-G **
10747985-C-T **
25990657-T-G 23844510-T-G P1_Y1 **
11666212-C-A **
15201519-C-A 13089605-C-A **
22993383-C-A 20831497-C-A **
6191115-A-AG 6323074-A-AG IR3_Dst **
3550576-A-C 3682535-A-C **
23807566-G-A 21645680-G-A **
22205018-G-T 20043132-G-T **
15995178-C-A 13883298-C-A **
6273856-A-AC 6405815-A-AC IR3_Dst **
18491668-A-T 16379788-A-T P6_Dst **
3990656-T-A 4122615-T-A **
25996173-A-G 23850026-A-G P1_Y1 **
4951718-C-A 5083677-C-A **
20993600-A-AC 18831714-A-AC P4_Dst **
17713873-TG-T 15601993-TG-T **
6509343-C-A 6641302-C-A **
13462282-C-A 11306606-C-A **
10821954-T-C **
2745822-C-A 2877781-C-A **
10796210-TGCTCC-T **
19007637-TATAC-T 16895757-TATAC-T **
15364058-T-A 13252178-T-A BY101141 **
19464220-G-T 17352340-G-T **
28081883-AAC-A 25935736-AAC-A P1_Y2 8×AC**
15044347-C-A 12932437-C-A **
23881874-T-A 21719988-T-A **
27417739-A-T 25271592-A-T P1_g3 **
9386154-A-G 9548545-A-G Z11540 **
10022216-G-A 10184607-G-A **
15410615-C-A 13298735-C-A **
13496541-C-G 11340865-C-G **
25246428-T-C 23100281-T-C P2_r1 **
17092583-C-A 14980703-C-A **
13462264-A-C 11306588-A-C **
18518311-A-T 16406431-A-T P6_Dst **
19853724-C-A 17741844-C-A P5_Prx **
13496562-A-G 11340886-A-G **
10082124-C-T 10244515-C-T **
10082104-C-G 10244495-C-G **
13709753-G-A 11554077-G-A *****
10684555-GTCCAT-G **
10864653-G-GCATTC **
28506259-C-A 26360112-C-A **
6459730-C-A 6591689-C-A **
9732892-T-A 9895283-T-A IR3_Prx **
10747970-G-T **
16700205-C-A 14588325-C-A **
22234189-T-A 20072303-T-A DYZ19 **
15477270-C-A 13365390-C-A **
15410608-T-G 13298728-T-G **
15410632-T-A 13298752-T-A **
22520773-C-G 20358887-C-G **
22316241-G-T 20154355-G-T DYZ19 **
3285288-A-G 3417247-A-G **
18454657-C-A 16342777-C-A P6_Dst **
21555558-C-A 19393672-C-A **
6948240-C-A 7080199-C-A **
6231140-G-A 6363099-G-A IR3_Dst **
4063851-C-A 4195810-C-A **
23475292-G-T 21313406-G-T **
16030044-C-A 13918164-C-A **
4374425-C-A 4506384-C-A **
10654461-C-G **
13962071-G-TT 11841365-G-TT **
5773797-C-A 5905756-C-A **
10973948-C-T **
18518307-C-T 16406427-C-T P6_Dst **
10747843-G-C **
10821958-A-T **
7256228-G-T 7388187-G-T **
2738749-C-T 2870708-C-T **
20242504-G-T 18080618-G-T P5_Dst **
7363155-T-A 7495114-T-A **
17004616-C-A 14892736-C-A **
16488050-C-A 14376170-C-A **
4178834-C-A 4310793-C-A **
10790309-T-C **
15558000-C-A 13446120-C-A **
21002539-C-CTA 18840653-C-CTA P4_Dst **
10790316-G-C **
4302880-C-A 4434839-C-A **
16981392-C-A 14869512-C-A **
10747986-C-G **
10987523-C-T **
14067073-C-A 11946367-C-A **
15221354-G-T 13109440-G-T **
13236268-CA-C 11080592-CA-C 8×A**
14483225-C-A 12362494-C-A **
3705255-A-C 3837214-A-C **
7425136-C-A 7557095-C-A **
4241460-C-A 4373419-C-A **
7156653-C-A 7288612-C-A **
22011430-C-A 19849544-C-A **
7021856-T-G 7153815-T-G **
6445847-C-A 6577806-C-A **
6648154-G-A 6780113-G-A **
6799017-C-A 6930976-C-A **
6799019-A-T 6930978-A-T **
6903433-G-T 7035392-G-T **
6911196-C-A 7043155-C-A **
6929571-T-A 7061530-T-A **
6967755-C-A 7099714-C-A **
6971791-G-A 7103750-G-A **
7028603-G-T 7160562-G-T **
6279335-T-G 6411294-T-G IR3_Dst **
7080839-C-A 7212798-C-A **
7087911-T-A 7219870-T-A **
7137014-C-A 7268973-C-A **
7140656-A-G 7272615-A-G **
7140956-A-C 7272915-A-C **
7172666-C-A 7304625-C-A **
7182251-C-A 7314210-C-A **
7225352-C-A 7357311-C-A **
7239652-G-C 7371611-G-C **
6280434-A-G 6412393-A-G IR3_Dst **
6137858-T-C 6269817-T-C IR3_Dst **
7255518-C-A 7387477-C-A **
5663305-G-T 5795264-G-T **
5393528-C-A 5525487-C-A **
5396364-C-A 5528323-C-A **
5409801-T-C 5541760-T-C **
5459324-C-A 5591283-C-A **
5570980-T-G 5702939-T-G **
5575538-T-G 5707497-T-G **
5575669-C-T 5707628-C-T **
5613512-G-T 5745471-G-T **
5620897-C-G 5752856-C-G **
5669092-G-T 5801051-G-T **
6097006-C-A 6228965-C-A **
5683849-C-A 5815808-C-A **
5684088-G-C 5816047-G-C **
5716314-C-A 5848273-C-A **
5716333-C-A 5848292-C-A **
5728164-C-A 5860123-C-A **
5818452-G-T 5950411-G-T **
5845008-G-C 5976967-G-C **
5927463-T-C 6059422-T-C **
6062703-G-T 6194662-G-T **
6090376-T-G 6222335-T-G **
7254476-C-A 7386435-C-A **
7258930-C-A 7390889-C-A **
5172152-C-A 5304111-C-A **
9015582-C-A 9177973-C-A **
8353306-C-A 8485265-C-A **
8398865-G-A 8530824-G-A **
8403266-T-A 8535225-T-A **
8705811-C-T 8837770-C-T **
8748566-C-A 8880525-C-A **
8822367-C-T 8954326-C-T **
8827373-A-T 8959332-A-T **
8854121-C-A 8986080-C-A **
8911570-G-T 9043529-G-T **
9063779-T-G 9226170-T-G **
8172724-G-A 8304683-G-A **
9194596-A-C 9356987-A-C **
9221717-C-CTATA 9384108-C-CTATA **
9501194-T-A 9663585-T-A **
9501211-T-A 9663602-T-A **
9771964-C-T 9934355-C-T Y65176 **
9928987-A-C 10091378-A-C **
9965273-A-G 10127664-A-G **
9983096-C-A 10145487-C-A **
9993408-C-A 10155799-C-A **
10003447-C-T 10165838-C-T **
8279909-G-A 8411868-G-A **
8100566-A-T 8232525-A-T **
7258986-G-C 7390945-G-C **
7524733-T-G 7656692-T-G **
7270304-GAC-T 7402263-GAC-T **
7285454-T-C 7417413-T-C **
7302448-C-A 7434407-C-A **
7303818-C-A 7435777-C-A **
7318619-C-A 7450578-C-A **
7363152-A-C 7495111-A-C **
7401970-A-G 7533929-A-G **
7432454-A-G 7564413-A-G **
7456740-T-C 7588699-T-C IR1_L **
7608474-T-C 7740433-T-C **
8080167-A-C 8212126-A-C **
7640954-C-A 7772913-C-A **
7643040-C-A 7774999-C-A **
7709397-C-A 7841356-C-A **
7721322-C-A 7853281-C-A **
7756894-C-A 7888853-C-A **
7758204-C-A 7890163-C-A **
7824894-T-C 7956853-T-C **
7886410-G-A 8018369-G-A **
7917285-C-A 8049244-C-A **
8076198-C-A 8208157-C-A **
5378815-G-T 5510774-G-T **
6903521-G-T 7035480-G-T **
5170078-T-A 5302037-T-A **
3543868-C-T 3675827-C-T **
5097860-C-A 5229819-C-A **
3395351-G-T 3527310-G-T **
3395494-G-T 3527453-G-T **
3436321-C-A 3568280-C-A **
3445561-G-T 3577520-G-T **
3459506-CTTT-C 3591465-CTTT-C 14×T**
3491570-C-A 3623529-C-A **
3610171-A-G 3742130-A-G **
3089008-G-T 3220967-G-T **
3610259-T-C 3742218-T-C **
3649233-C-G 3781192-C-G **
3735246-C-A 3867205-C-A **
3836319-G-T 3968278-G-T **
3960931-T-G 4092890-T-G **
3979882-G-T 4111841-G-T **
4170191-A-G 4302150-A-G **
4215543-T-C 4347502-T-C **
3331029-T-C 3462988-T-C **
3061115-T-C 3193074-T-C **
4326637-C-A 4458596-C-A **
10959240-C-A **
18186014-A-G 16074134-A-G **
17375247-C-A 15263367-C-A **
10969748-C-A **
24070729-T-A 21924582-T-A P3_b1 **
15398427-C-A 13286547-C-A **
17537967-C-A 15426087-C-A **
10790283-C-G **
22124515-C-A 19962629-C-A **
2773844-C-A 2905803-C-A **
3053398-C-A 3185357-C-A **
2790345-G-T 2922304-G-T **
2833413-C-A 2965372-C-A **
2843931-G-T 2975890-G-T **
2855468-T-TG 2987427-T-TG **
2909661-C-A 3041620-C-A **
2981400-A-G 3113359-A-G **
3016383-G-T 3148342-G-T **
3045937-G-T 3177896-G-T **
4271254-C-A 4403213-C-A **
3347691-T-C 3479650-T-C **
4395023-G-A 4526982-G-A **
4487480-C-A 4619439-C-A **
5073344-G-A 5205303-G-A **
5068000-C-G 5199959-C-G **
5059676-C-T 5191635-C-T **
4964520-C-A 5096479-C-A **
4433602-T-C 4565561-T-C **
4862405-C-A 4994364-C-A **
4842041-G-C 4974000-G-C **
4701240-G-T 4833199-G-T **
4663866-A-G 4795825-A-G **
4663844-G-A 4795803-G-A **
4656689-G-C 4788648-G-C **
4504643-C-A 4636602-C-A **
9033-T-C **
4447928-A-G 4579887-A-G **
4473063-C-A 4605022-C-A **
21084349-ATA-A,ATG 18922463-ATA-A,ATG ***
13799070-G-T 11678364-G-T ***
14864918-GT-G 12752984-GT-G 11×T***
13462151-C-T 11306475-C-T ***
14730697-T-C 12618765-T-C ***
13465428-ATATG-A 11309752-ATATG-A ***
2834869-CTTTT-C,CTTT 2966828-CTTTT-C,CTTT 15×T***
13194655-C-A 11038979-C-A ***
2741129-G-T 2873088-G-T ***
13462185-G-C 11306509-G-C ***
13828451-A-C 11707745-A-C ***
13113191-G-T 10602677-G-T ***
13828461-G-T 11707755-G-T ***
9666541-G-T 9828932-G-T Y89125 IR3_Prx ***
14027624-C-A 11906918-C-A ***
14479431-C-A 12358700-C-A ***
22218094-A-C 20056208-A-C DYZ19 ***
22223853-C-A 20061967-C-A DYZ19 ***
22283050-T-G 20121164-T-G DYZ19 ***
22301771-C-T 20139885-C-T DYZ19 ***
24955827-G-A 22809680-G-A g1 ***
26713834-T-A 24567687-T-A P1_g2 ***
58978984-TCCATG-T 56832837-TCCATG-T ***
14053676-C-A 11932970-C-A ***
23572484-C-CGT 21410598-C-CGT 13×GT***
23484421-C-A 21322535-C-A ***
7098902-TAAAA-T 7230861-TAAAA-T 16×A***
13462147-C-T 11306471-C-T A3349 ***
9768831-C-A 9931222-C-A ***
22260852-G-T 20098966-G-T DYZ19 ***
9645673-TG-T 9808064-TG-T IR3_Prx ***
13466710-G-T 11311034-G-T ***
56858412-G-GA ***
13858094-C-T 11737388-C-T 5×GGAAT***
13848877-A-C 11728171-A-C ***
13848896-T-A 11728190-T-A ***
56833707-C-T ***
56829965-C-A ***
28772712-C-A 26626565-C-A ***
13828432-T-G 11707726-T-G ***
13828436-T-G 11707730-T-G ***
13828437-A-G 11707731-A-G ***
10024824-T-C 10187215-T-C ***
13489933-G-C 11334257-G-C ***
16312063-C-A 14200183-C-A ***
22251344-T-A 20089458-T-A BY25026 DYZ19 ***
14488634-C-A 12367903-C-A ***
13477785-C-A 11322109-C-A BY210354 ***
17128513-C-A 15016633-C-A ***
28661351-GATCC-G 26515204-GATCC-G 10×ATCC***
13448886-CTCCACTCCAG-C,CTCCACTCCAC 11293210-CTCCACTCCAG-C,CTCCACTCCAC ***
2802800-A-T 2934759-A-T ***
25194604-CTTCT-C 23048457-CTTCT-C g1 5×TTCT***
9789312-G-A 9951703-G-A ***
14914655-C-T 12802722-C-T ***
13462141-C-A 11306465-C-A ***
21821667-C-A 19659781-C-A ***
10885144-C-A ***
13919208-CAAAAA-C,CAAAAAAA 11798502-CAAAAA-C,CAAAAAAA 17×A***
17289662-C-A 15177782-C-A ***
13627251-C-T 11471575-C-T ***
9030112-G-T 9192503-G-T ***
14753248-C-A 12641317-C-A ***
7501439-G-T 7633398-G-T IR1_L ***
18317461-TA-T,TAA 16205581-TA-T,TAA P6_Prx 15×A***
10792570-T-A ***
10845713-T-A ***
14767039-A-T 12655108-A-T ***
4100915-C-A 4232874-C-A ***
8344218-C-G 8476177-C-G ***
13474685-C-G 11319009-C-G ***
4449124-C-A 4581083-C-A ***
7143896-G-A 7275855-G-A ***
10801662-C-CA ***
19031594-T-C 16919714-T-C ***
7241541-C-A 7373500-C-A ***
13952765-C-A 11832059-C-A ***
13474670-C-G 11318994-C-G ***
21464149-T-A 19302263-T-A ***
14528234-G-A 12416435-G-A ***
13489699-GC-G 11334023-GC-G ***
3833675-C-A 3965634-C-A ***
15423464-G-A 13311584-G-A ***
56830077-C-A ***
19566515-C-A 17454635-C-A ***
7608540-TAAAAA-T 7740499-TAAAAA-T 17×A***
9645682-A-T 9808073-A-T IR3_Prx ***
4215601-T-C 4347560-T-C ***
13446531-ATTCCATTCCATTCCATTC-A,ACTCCACTCCATTCCATTC 11290855-ATTCCATTCCATTCCATTC-A,ACTCCACTCCATTCCATTC ***
56827489-G-T ***
8400918-G-T 8532877-G-T ***
14847004-CAAAA-C 12735070-CAAAA-C 20×A***
10801731-CCTTTT-C ***
14993387-G-A 12881472-G-A ***
3834746-C-A 3966705-C-A ***
7137107-C-T 7269066-C-T ***
6922868-C-A 7054827-C-A ***
7282873-C-A 7414832-C-A ***
10693871-TTCCAC-T ***
10024329-C-A 10186720-C-A ***
10846997-C-A ***
15775128-C-A 13663248-C-A ***
3131208-C-A 3263167-C-A ***
2836374-C-A 2968333-C-A ***
21558713-G-T 19396827-G-T ***
7861979-G-T 7993938-G-T Y85187 ***
16217950-C-A 14106070-C-A ***
7767824-TAAA-T 7899783-TAAA-T 13×A***
22669037-C-A 20507151-C-A ***
22241116-G-A 20079230-G-A DYZ19 ***
16520992-CAAAA-C 14409112-CAAAA-C 16×A***
16720448-G-T 14608568-G-T ***
15451589-C-A 13339709-C-A ***
16719744-C-A 14607864-C-A ***
13600982-GAT-G,GATAT 11445306-GAT-G,GATAT 10×AT***
10894552-ATTCCC-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 3592861067419377173447800113
Kit: 359286965451878415257733843
Used in age calculations1067419378415257800113
Counts of SNPs117
Variant counts last updated 2019-07-19 22:47:59.



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