Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > L1335/S530 > L1065 > Z16325 > S744 > S764 > 18381513-G-A > 17278989-T-G > A14498

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
20709307-A-G 18547421-A-G BY1683 P4_Prx A*
25883481-A-G 23737334-A-G P1_Y1 A*
26227330-G-A 24081183-G-A P1_Y1 A*
26151433-A-G 24005286-A-G P1_Y1 A*
19782963-A-G 17671083-A-G BY1591 P5_Prx A*
19893186-A-G 17781306-A-G BY1618 P5_Prx A*
19922136-T-G 17810256-T-G BY1626 P5_Prx A*
20677960-T-C 18516074-T-C BY1679 P4_Prx A*
23714782-G-T 21552896-G-T SUR66 A*
25994454-C-T 23848307-C-T P1_Y1 A*
26080193-G-A 23934046-G-A P1_Y1 A*
28817136-G-A 26670989-G-A A*
28817435-A-G 26671288-A-G A*
28817615-A-T 26671468-A-T A*
28817874-G-T 26671727-G-T A*
25888890-A-G 23742743-A-G P1_Y1 A*
28817850-T-A 26671703-T-A A*
16116284-T-C 14004404-T-C P8_Prx A*
28817738-T-G 26671591-T-G A*
28817196-G-C 26671049-G-C A*
28817542-T-C 26671395-T-C A*
24285378-G-A 22139231-G-A BY2235 Z38739 P3_t1 A*
19920004-G-A 17808124-G-A E766 P5_Prx A*
20647539-G-T 18485653-G-T A202 ZS2500 P4_Prx A*
19790628-A-G 17678748-A-G P5_Prx A*
19573693-A-G 17461813-A-G ZS1823 P5_Prx YA*
13687302-G-A 11531626-G-A A*
28816646-A-T 26670499-A-T A*
24254847-T-G 22108700-T-G P3_b1 A*
23886613-T-C 21724727-T-C Y112469 YA*
6171969-T-C 6303928-T-C IR3_Dst A*
6254592-G-A 6386551-G-A IR3_Dst A*
18315965-G-A 16204085-G-A P6_Prx A*
6325051-C-T 6457010-C-T IR3_Dst A*
16121606-G-A 14009726-G-A Z18268 P8_Prx A*
22470209-A-G 20308323-A-G PF4932 DYZ19 A*
20706684-G-T 18544798-G-T E763 P4_Prx A*
20724484-G-A 18562598-G-A Z16738 P4_Prx A*
26223714-A-T 24077567-A-T P1_Y1 A*
25983781-C-T 23837634-C-T BY2426 P1_Y1 A*
26329573-G-A 24183426-G-A P1_Y1 A*
22256982-T-G 20095096-T-G BY1881 DYZ19 A*
19617659-C-A 17505779-C-A P5_Prx YA*
26350200-T-G 24204053-T-G P1_Y1 A*
24278853-G-C 22132706-G-C E730 P3_t1 A*
24287968-G-A 22141821-G-A BY2236 A15814 P3_t1 A*
22220543-C-T 20058657-C-T DYZ19 A*
22294691-G-A 20132805-G-A FGC31633 BY1947 DYZ19 A*
6206985-A-G 6338944-A-G BY86 ZS1572 IR3_Dst A*
6361637-A-G 6493596-A-G BY40446 A*
6387672-G-C 6519631-G-C A*
6320961-A-T 6452920-A-T ZS2995 IR3_Dst A*
26035145-T-C 23888998-T-C P1_Y1 A*
6184013-T-G 6315972-T-G IR3_Dst A*
6151530-G-A 6283489-G-A IR3_Dst A*
25556066-T-G 23409919-T-G P1_gr1 A*
6106629-T-G 6238588-T-G BY16700 A*
6106896-C-T 6238855-C-T A16709 A*
6107138-A-G 6239097-A-G A*
19758823-C-T 17646943-C-T P5_Prx A*
26242875-A-G 24096728-A-G FGC35722 P1_Y1 A*
20678187-C-T 18516301-C-T ZS4043 P4_Prx A*
26063747-A-G 23917600-A-G P1_Y1 A*
26067517-A-G 23921370-A-G P1_Y1 A*
18314941-C-A 16203061-C-A Z24322 P6_Prx A*
26114906-A-G 23968759-A-G P1_Y1 A*
28816761-T-C 26670614-T-C A*
23886605-G-C 21724719-G-C Y112468 YA*
20632676-C-T 18470790-C-T E912 P4_Prx A*
4968655-T-G 5100614-T-G FGC283 A*
19932400-C-T 17820520-C-T P5_Prx A*
18345615-G-T 16233735-G-T Z18430 P6_Prx A*
20041221-G-A 17929341-G-A P5_Prx A*
19865466-G-GT 17753586-G-GT P5_Prx A*
26271608-A-C 24125461-A-C Y2279_1 P1_Y1 A*
19616979-G-T 17505099-G-T BY1564 P5_Prx YA*
23232103-G-T 21070217-G-T Y111014 YA*
20774539-A-G 18612653-A-G P4_Prx A*
26230223-T-G 24084076-T-G BY25081 P1_Y1 A*
26216339-T-C 24070192-T-C A14887 P1_Y1 A*
26130618-G-A 23984471-G-A BY2449 P1_Y1 A*
19836014-G-A 17724134-G-A P5_Prx A*
19795881-C-T 17684001-C-T P5_Prx A*
19648849-C-T 17536969-C-T P5_Prx A*
19829153-G-A 17717273-G-A ZS4558 P5_Prx A*
19834589-G-T 17722709-G-T ZS3710 P5_Prx A*
20661846-C-G 18499960-C-G ZS5828 P4_Prx A*
22314247-T-G 20152361-T-G DYZ19 A*
18300737-C-T 16188857-C-T P6_Prx A*
22476651-A-C 20314765-A-C BY26567 DYZ19 A*
7190024-A-G 7321983-A-G PF4950 CTS1085 YY+
19070676-G-T 16958796-G-T YY*+
15714149-A-G 13602269-A-G Y94532 YY+
23444765-T-A 21282879-T-A YY*+
10046063-G-A 10208454-G-A +
15080010-C-. 12968100-T-C +
19812910-C-T 17701030-C-T P5_Prx +
21929487-A-T 19767601-A-T Y107921 YY+
19181063-T-A 17069183-T-A J2F4283 PF4922 Y*
19305394-G-A 17193514-G-A BY11781SK646 Y12712 YY*
15642277-A-AG 13530397-A-AG 8×G*
16261215-A-G 14149335-A-G J2PF4910 F2113 YY*
21126140-T-TATC 18964254-T-TATC *
8992300-A-AT 9154691-A-AT Y2319 *
20816211-G-C 18654325-G-C PF5104 P4_Gap *
19283232-A-T 17171352-A-T CTS10134 PF4980 YY*
19220113-C-A 17108233-C-A CTS10036 YY*
6737522-T-TA 6869481-T-TA Y2314 8×A*
8034983-G-GA 8166942-G-GA Y2288 9×A*
18090737-G-GA 15978857-G-GA FGC47883Y2338 8×A*
8420738-G-C 8552697-G-C PF4957 F1183 YY*
20836109-A-G 18674223-A-G PF5105 P4_Gap *
23496991-CTA-C 21335105-CTA-C *
23088142-T-C 20926256-T-C YSC0000236 PF4616 L778 YY*
23163701-C-A 21001815-C-A PF4617 CTS11571 Y*
7835657-G-A 7967616-G-A Y12707 YY*
7557733-C-A 7689692-C-A S10343 YY*
6932998-T-C 7064957-T-C S9634 YY*
2888689-A-G 3020648-A-G FGC12729 Z17920 YY*
23250894-C-T 21089008-C-T YSC0001250 PF4618 CTS11750 YY*
23251880-A-C 21089994-A-C YSC0000239 PF4619 YY*
23255729-A-T 21093843-A-T PF4620 CTS11765 YY*
23748578-A-G 21586692-A-G F4334 PF4990 Y*
23538307-C-G 21376421-C-G PF4622 YY*
23484915-G-GCTCT 21323029-G-GCTCT *
21258787-T-C 19096901-T-C PF4982 YY*
23422150-G-C 21260264-G-C CTS12015 YY*
23421475-G-A 21259589-G-A CTS12014 YY*
23273016-G-A 21111130-G-A YSC0001251 PF4621 CTS11787 YY*
23301413-T-TC 21139527-T-TC *
22711465-T-C 20549579-T-C L212 PF4988 YY*
22687035-A-G 20525149-A-G F3343 PF4933 YY*
22287805-AT-A 20125919-AT-A DYZ19 *
23443976-A-G 21282090-A-G YSC0001253 CTS12047 YY*
24426007-C-T 22279860-C-T PF3568 F3629 Y*
21970721-G-T 19808835-G-T L505 PF4987 YY*
21674327-A-G 19512441-A-G L559 PF4986 YY*
21292707-A-T 19130821-A-T PF4925 YY*
19069070-G-A 16957190-G-A CTS9781 PF4978 YY*
2736889-T-C 2868848-T-C CTS113 PF4884 YY*
28531624-A-G 26385477-A-G Y113114 Y*
7680253-C-G 7812212-C-G PF4953 YY*
7771358-C-T 7903317-C-T J2S321 PF4895 L228 F4087 YY*
7813673-T-A 7945632-T-A PF4954 YY*
7813674-G-A 7945633-G-A Z7755 YY*
15704139-C-T 13592259-C-T PF4966 CTS4540 YY*
15632637-G-T 13520757-G-T PF5096 CTS4403 YY*
15610713-G-T 13498833-G-T PF4965 CTS4360 YY*
7839500-T-A 7971459-T-A PF4955 YY*
15501988-G-GT 13390108-G-GT Y2289 *
7850169-G-A 7982128-G-A M4232 YY*
15468045-T-G 13356165-T-G PF4964 CTS4195 YY*
15317764-A-T 13205870-A-T Y12710 YY*
15203000-C-G 13091086-C-G PF4963 CTS3816 YY*
14244185-G-GA 12123479-G-GA 10×A*
7432989-A-G 7564948-A-G F4074 Y*
14106407-G-A 11985701-G-A FGC2793 Z7759 YY*
8017527-A-AATAG 8149486-A-AATAG *
8028804-A-AT 8160763-A-AT *
13843938-T-A 11723232-T-A BY26338 *
13832032-G-T 11711326-G-T PF4905 *
13695869-C-T 11540193-C-T PF4904 *
8351025-G-A 8482984-G-A PF4897 F4095 YY*
13684562-C-T 11528886-C-T FGC2790 Y29592 *
13204459-G-T 11048783-G-T PF4527 *
10038100-G-A 10200491-G-A FGC1604 Z7814 *
8988909-C-T 9151300-C-T PF4900 Y*
8738272-C-T 8870231-C-T PF4898 YY*
8474549-T-A 8606508-T-A PF4958 F4106 YY*
7676739-C-T 7808698-C-T PF4952 YY*
16310787-T-G 14198907-T-G PF4968 CTS5482 YY*
2751678-A-G 2883637-A-G M410 PF4941 YY*
17614366-G-A 15502486-G-A CTS7683 PF5100 P354 YY*
6363373-TC-T 6495332-TC-T *
8465758-C-G 8597717-C-G F1227 YY*
6388343-A-C 6520302-A-C FGC21990 SUR9 *
6644611-T-C 6776570-T-C FGC3272 YY*
6824785-G-A 6956744-G-A PF4892 CTS523 YY*
19038302-A-C 16926422-A-C P124 PF3553 YY*
18978214-C-G 16866334-C-G J2F4272 PF4920 YY*
27849172-CTTGT-C 25703025-CTTGT-C P1_Y2 *
18772238-T-G 16660358-T-G F4266 PF4918 YY*
18615144-C-A 16503264-C-A F4259 PF4976 YY*
18391106-T-A 16279226-T-A F2749 PF4574 YSC0001310 P6_Gap *
18018684-C-G 15906804-C-G F2672 PF4975 Y*
17904970-C-T 15793090-C-T CTS8264 PF4974 YY*
17191877-C-A 15079997-C-A F2418 PF4972 YY*
16459438-G-A 14347558-G-A J2PF4912 CTS5728 YY*
17042047-C-T 14930167-C-T CTS6660 PF4971 YY*
17032059-G-T 14920179-G-T F4221 YY*
17030339-A-AAC 14918459-A-AAC *
16991073-GTT-G 14879193-GTT-G 13×T*
16739675-C-T 14627795-C-T FGC2795 Z7760 YY*
16542685-C-G 14430805-C-G PF4913 CTS5904 YY*
6854256-C-T 6986215-C-T PF4948 F841 YY*
6864895-G-C 6996854-G-C CTS585 YY*
7068942-G-A 7200901-G-A PF4893 CTS886 YY*
7158459-A-G 7290418-A-G PF4949 CTS1030 YY*
7234782-C-T 7366741-C-T CTS1146 YY*
16518740-G-A 14406860-G-A PF4969 CTS5867 YY*
7240092-G-GC 7372051-G-GC *
15998551-A-C 13886671-A-C CTS5066 YY*
28785890-G-T 26639743-G-T Z6054 *
8029507-A-G 8161466-A-G Y12407 YY*
14061028-C-T 11940322-C-T Y90186 YY*
16562341-T-C 14450461-T-C Y96694 YY*
16495217-T-C 14383337-T-C Y96507 YY*
16301002-GAAA-G 14189122-GAAA-G 18×A*
15786275-A-T 13674395-A-T Y12410 YY*
15766330-A-T 13654450-A-T Y94714 YY*
15273961-A-G 13162050-A-G Y93422 YY*
15152250-G-C 13040337-G-C Y93140 YY*
15020309-A-C 12908398-A-C Y12369 Z28492 YY*
14998767-C-T 12886852-C-T Y92744 YY*
14750010-T-C 12638079-T-C Y92095 YY*
14374745-G-T 12254041-G-T Y91233 YY*
14308570-A-G 12187864-A-G Y91010 YY*
14174313-G-T 12053607-G-T S15572 YY*
16912390-T-C 14800510-T-C S18969 YY*
23533112-C-T 21371226-C-T Y111793 YY*
9758599-T-G 9920990-T-G Y89132 Y*
9395103-C-T 9557494-C-T Y88902 YY*
8896229-T-C 9028188-T-C Y88317 Y*
8818259-C-T 8950218-C-T Y88087 YY*
8789365-G-T 8921324-G-T Y88007 YY*
8473471-C-T 8605430-C-T Y86997 YY*
8209989-A-C 8341948-A-C Y86125 YY*
23742788-G-A 21580902-G-A Y112199 *
7773258-T-A 7905217-T-A Y12368 YY*
7458198-A-G 7590157-A-G Z28447 IR1_L *
7427219-C-CATATA 7559178-C-CATATA *
7151236-C-T 7283195-C-T Y83464 YY*
7011944-A-G 7143903-A-G Y83138 YY*
16713590-A-G 14601710-A-G Y12608 Z28506 YY*
17198172-G-A 15086292-G-A S19344 YY*
6892906-A-G 7024865-A-G Y82801 YY*
23059418-C-G 20897532-C-G Y110468 YY*
22487919-G-T 20326033-G-T BY26580 DYZ19 *
22419710-A-G 20257824-A-G FGC61616 DYZ19 *
22958276-G-T 20796390-G-T Y110222 YY*
22003743-A-G 19841857-A-G Y108114 YY*
21984356-G-C 19822470-G-C Y108058 YY*
21974500-C-T 19812614-C-T Y108022 YY*
23033002-A-G 20871116-A-G Y110380 YY*
21825703-C-A 19663817-C-A Y107615 YY*
21797127-T-G 19635241-T-G Y107510 YY*
21768103-CTTATT-C 19606217-CTTATT-C *
21372529-T-C 19210643-T-C Y106275 YY*
21303832-TCTC-T 19141946-TCTC-T *
21158896-C-T 18997010-C-T Y105574 YY*
20063195-T-C 17951315-T-C P5_Gap *
19365067-T-A 17253187-T-A Y104516 YY*
17437897-A-G 15326017-A-G Y99147 YY*
19287789-T-G 17175909-T-G Y104281 YY*
19279949-C-T 17168069-C-T Y104252 YY*
18843248-A-C 16731368-A-C Z38471 YY*
18700633-T-C 16588753-T-C Y102461 YY*
18571782-G-T 16459902-G-T YY*
18223532-G-T 16111652-G-T Y101699 Y*
18209987-C-A 16098107-C-A BZ2156 YY*
18204828-T-A 16092948-T-A Y101629 YY*
18144098-A-G 16032218-A-G Y101436 YY*
18062662-GT-G 15950782-GT-G *
17942135-G-A 15830255-G-A Y100717 YY*
17674241-A-G 15562361-A-G Y99894 YY*
17575022-T-C 15463142-T-C Y99585 YY*
17506580-G-A 15394700-G-A Z43525 YY*
6932032-G-A 7063991-G-A Y82924 YY*
4900990-A-G 5032949-A-G *
8417425-T-G 8549384-T-G PF4956 F4100 YY*
19171219-A-T 17059339-A-T Y12708 Z28440 Y*
13697583-G-A 11541907-G-A FGC58439 *
22909101-C-T 20747215-C-T YSC0001317 PF3566 F3368 YY*
23584076-C-T 21422190-C-T Y12372 Z29420 YY*
23033706-C-T 20871820-C-T PF5112 CTS11251 YY*
22563247-T-C 20401361-T-C Y12412 Z28495 YY*
22469435-C-A 20307549-C-A Z7743 DYZ19 *
22457748-C-G 20295862-C-G Z29419 DYZ19 *
22302205-G-A 20140319-G-A Z7741 DYZ19 *
22184959-C-T 20023073-C-T S24092 YY*
21951018-T-C 19789132-T-C Z29418 S23761 YY*
21541669-T-C 19379783-T-C PF4985 YY*
20810734-C-A 18648848-C-A Y12709 P4_Gap *
19535329-C-T 17423449-C-T Y105075 YY*
18620175-C-T 16508295-C-T Z29416 SK1322 S21087 YY*
14286352-T-TA 12165646-T-TA 11×A*
17495914-G-A 15384034-G-A F2502 PF4564 YY*
17368140-C-T 15256260-C-T Y12609 Z29415 YY*
17195380-C-A 15083500-C-A Y12371 Z28480 YY*
16270041-G-T 14158161-G-T S18075 YY*
15783184-G-A 13671304-G-A Z6049 S17591 YY*
15632863-T-C 13520983-T-C Z6048 YY*
15314086-C-A 13202191-C-A Y12409 Z28463 YY*
15093231-C-G 12981319-C-G Z6047 YY*
13842823-G-T 11722117-G-T BY26337 *
13455712-T-G 11300036-T-G FGC22229 *
13254909-A-G 11099233-A-G BY946 *
9480296-G-T 9642687-G-T F1559 *
8809001-T-C 8940960-T-C PF5091 YY*
8795954-C-A 8927913-C-A Y12408 YY*
22562563-CAAATAAAT-C 20400677-CAAATAAAT-C BY3569 9×AAAT*
22440877-T-G 20278991-T-G DYZ19 *
4408708-G-A 4540667-G-A Y81987 *
15172515-C-. 13060601-G-C *
3366884-T-C 3498843-T-C *
3060895-GT-G 3192854-GT-G 10×T*
2882004-G-A 3013963-G-A Y81692 YY*
2827223-A-T 2959182-A-T Y81559 YY*
23966451-G-T 21820304-G-T Y112513 Y*
16641872-CATATATAT-C 14529992-CATATATAT-C 12×AT*
26925-G-T *
17406449-G-GA 15294569-G-GA 8×A*
24413251-T-C 22267104-T-C Y112787 Y*
24418922-T-A 22272775-T-A Y112799 Y*
2668456-T-C 2800415-T-C YY*
13723147-G-A 11567471-G-A *
13151440-GTAAATT-G *
15111148-G-. 12999235-C-G *
6250465-A-C 6382424-A-C FGC45430 IR3_Dst *
15078469-C-. 12966559-G-C *
15037433-C-. 12925521-G-C *
15026424-A-. 12914512-C-A *
14898094-A-. 12786160-G-A *
14864191-T-. 12752257-C-T *
14829196-C-. 12717263-T-C *
12707114-T-TTTTG *
14641193-C-. 12529262-T-C *
14637352-T-. 12525421-C-T *
14556851-C-. 12445052-T-C *
14522828-G-. 12411029-A-G *
14433100-G-. 12312373-A-G *
14416216-G-. 12295513-A-G *
23181734-G-A 21019848-G-A FGC50134 Y*
17676-T-C *
13479419-C-A 11323743-C-A *
22866703-C-G 20704817-C-G YY*
23984056-A-G 21837909-A-G Y*
23134896-T-C 20973010-T-C PF6079 YSC0000237 YY*
23403749-A-G 21241863-A-G YY*
23452965-C-T 21291079-C-T YY*
23476936-T-G 21315050-T-G YY*
23631629-A-C 21469743-A-C YY*
23811761-G-T 21649875-G-T Y*
23845409-C-T 21683523-C-T Y*
24360964-A-G 22214817-A-G FGC200 *
23035132-A-G 20873246-A-G YY*
24394612-A-G 22248465-A-G Y*
28771116-G-C 26624969-G-C CTS12972 FGC52 *
8498913-G-GT 8630872-G-GT *
17392632-AT-A 15280752-AT-A 8×T*
17881230-C-G 15769350-C-G YY*
18720028-T-C 16608148-T-C YY*
23124367-T-G 20962481-T-G CTS11468 FGC49 YY*
22889018-A-G 20727132-A-G YY*
2686727-A-G 2818686-A-G YY*
21983827-T-C 19821941-T-C YY*
7948701-T-G 8080660-T-G V1532 YY*
21358553-A-G 19196667-A-G YY*
21410840-T-G 19248954-T-G YY*
21558298-T-G 19396412-T-G YY*
21784286-A-G 19622400-A-G YY*
21843090-G-C 19681204-G-C YY*
21917832-C-T 19755946-C-T YY*
21995972-A-T 19834086-A-T YY*
22796697-C-T 20634811-C-T CTS10834 YY*
22157311-A-C 19995425-A-C YY*
22478922-C-T 20317036-C-T DYZ19 *
22486700-T-G 20324814-T-G Z8156 KMS453 DYZ19 *
22687547-T-A 20525661-T-A CTS10663 YY*
22733758-G-C 20571872-G-C YY*
22739367-C-T 20577481-C-T YY*
22750583-A-C 20588697-A-C YY*
7900883-A-C 8032842-A-C FGC41 SK2062 Z8135 V1501 E117 YY*
2817429-G-C 2949388-G-C CTS216 YY*
8050994-C-G 8182953-C-G YY*
16331558-A-G 14219678-A-G YY*
14117810-T-C 11997104-T-C YY*
15480547-G-C 13368667-G-C V2974 YY*
15648415-T-C 13536535-T-C CTS4437 YY*
15944828-C-G 13832948-C-G YY*
16222561-T-C 14110681-T-C YSC0000186 YY*
16497020-C-T 14385140-C-T YY*
16535034-G-A 14423154-G-A CTS5884 YY*
16713287-A-G 14601407-A-G YY*
16769601-C-CT 14657721-C-CT *
17206350-T-G 15094470-T-G CTS6948 YY*
17341676-G-A 15229796-G-A CTS7194 YY*
17470112-A-G 15358232-A-G YY*
17508337-T-C 15396457-T-C YY*
13703571-AGAATG-A 11547895-AGAATG-A 8×GAATG*
9841700-C-G 10004091-C-G YY*
6630931-G-A 6762890-G-A YY*
7848043-G-C 7980002-G-C YSC0000279 YY*
7891188-C-T 8023147-C-T YY*
6670461-G-T 6802420-G-T YY*
6931040-G-C 7062999-G-C CTS655 YY*
7459474-A-G 7591433-A-G CTS1518 IR1_L *
7549445-A-T 7681404-A-T V1195 YY*
7628900-A-G 7760859-A-G YY*
7714986-G-T 7846945-G-T YY*
8257661-G-A 8389620-G-A YY*
9171956-A-T 9334347-A-T Y*
8326618-T-C 8458577-T-C V1809 YY*
8334875-G-A 8466834-G-A YY*
8619538-A-G 8751497-A-G PF303 br1 YY*
8685083-G-A 8817042-G-A YY*
8696594-A-G 8828553-A-G YY*
8845380-T-C 8977339-T-C YY*
9065725-G-GCTAACA 9228116-G-GCTAACA *
9098922-T-C 9261313-T-C Y*
7960019-A-G 8091978-A-G YY*
8070532-A-T 8202491-A-T YY*
18028661-G-A 15916781-G-A Y*
22785217-G-A 20623331-G-A YSC0001316 PF4611 F3358 YY*
18117193-T-C 16005313-T-C YY*
16718720-T-C 14606840-T-C YY*
18137831-C-T 16025951-C-T CTS8665 FGC464 YY*
16629782-C-T 14517902-C-T YY*
16615413-T-G 14503533-T-G YY*
18167403-T-C 16055523-T-C YY*
16491135-T-C 14379255-T-C CTS5815 PF6044 Y*
18180446-A-C 16068566-A-C YY*
18095336-C-A 15983456-C-A CTS8591 FGC64 YY*
16376495-C-A 14264615-C-A CTS5577 FGC38 YY*
18248698-G-A 16136818-G-A Y*
16183412-A-C 14071532-A-C Y*
18394634-C-T 16282754-C-T P6_Gap *
15667208-C-G 13555328-C-G YSC0000179 FGC1168 SK2006 Y*
15594523-G-A 13482643-G-A V3064 YY*
15590342-T-G 13478462-T-G YY*
18109555-A-C 15997675-A-C YY*
18066156-T-C 15954276-T-C YY*
15581983-G-A 13470103-G-A YY*
17461478-C-T 15349598-C-T CTS7400 FGC33 YY*
17013730-A-G 14901850-A-G YSC0000194 YY*
16944053-C-T 14832173-C-T YY*
17132580-T-C 15020700-T-C YY*
16939406-C-A 14827526-C-A YY*
17281258-G-T 15169378-G-T E101 YY*
17285993-T-C 15174113-T-C YY*
17301401-A-G 15189521-A-G CTS7122 YY*
17589518-T-C 15477638-T-C CTS7650 FGC44 S1164 YY*
16742224-G-A 14630344-G-A YY*
17594966-G-C 15483086-G-C CTS7659 FGC50 YY*
16856357-C-T 14744477-C-T YY*
17844018-C-T 15732138-C-T YY*
17986687-A-C 15874807-A-C YSC0000269 Y*
18017528-T-G 15905648-T-G FGC197 SK2005 Y*
18026855-A-G 15914975-A-G Y*
16773870-G-A 14661990-G-A YY*
16751825-A-G 14639945-A-G YY*
18719565-C-T 16607685-C-T YY*
15510064-G-T 13398184-G-T V2997 YY*
8149348-G-A 8281307-G-A YY*
8881927-G-GGT 9013886-G-GGT *
21219443-G-A 19057557-G-A YY*
10038192-A-G 10200583-A-G A702 Z8137 *
21222868-G-C 19060982-G-C YY*
9788914-G-T 9951305-G-T FGC196 Y*
9392948-T-C 9555339-T-C Y*
9170545-A-C 9332936-A-C Y*
9084870-T-G 9247261-T-G YSC0000082 Y*
8722476-T-A 8854435-T-A YY*
21166358-G-T 19004472-G-T PF6142 YY*
8676330-A-G 8808289-A-G YY*
21263029-A-G 19101143-A-G YY*
8667179-G-A 8799138-G-A YY*
8633545-C-T 8765504-C-T YY*
8439542-A-G 8571501-A-G V1980 YY*
8416058-A-C 8548017-A-C YY*
8194310-A-C 8326269-A-C V1699 YY*
13656660-A-G 11500984-A-G *
20838224-G-A 18676338-G-A P4_Gap *
14750668-C-A 12638737-C-A V2573 YY*
13822833-T-G 11702127-T-G FGC36 E159 *
18865298-T-C 16753418-T-C YY*
14317555-A-G 12196849-A-G YY*
18907236-C-A 16795356-C-A YY*
18914441-T-C 16802561-T-C YY*
19045552-T-C 16933672-T-C YSC0000207 YY*
14205302-A-C 12084596-A-C YY*
14116584-A-T 11995878-A-T YSC0000166 YY*
19054889-T-C 16943009-T-C V3721 YY*
20828795-A-G 18666909-A-G P4_Gap *
13807475-A-C 11686769-A-C FGC189 *
13693812-T-C 11538136-T-C Z8151 KMS121 *
19179540-A-G 17067660-A-G V3866 Y*
19179606-C-A 17067726-C-A V3867 Y*
13657777-C-T 11502101-C-T L777 YSC0000248 *
19291359-C-T 17179479-C-T V3993 YY*
19504659-A-T 17392779-A-T V4199 YY*
20811307-A-G 18649421-A-G P4_Gap *
17559652-C-T 15447772-C-T CTS7604 YY*
21312064-A-C 19150178-A-C YY*
18647146-C-A 16535266-C-A YSC0000205 YY*
16268345-C-G 14156465-C-G YSC0000785 PF4553 F2116 YY*
15554989-A-G 13443109-A-G PF3539 F4188 V3028 YY*
15581303-G-A 13469423-G-A YSC0001304 PF4546 F1973 YY*
15602183-G-A 13490303-G-A PF4547 CTS4349 YY*
6753511-A-G 6885470-A-G YY*
15913787-A-C 13801907-A-C PF4549 CTS4937 YY*
16180103-A-G 14068223-A-G PF4550 CTS5280 Y*
16262942-G-A 14151062-G-A PF4551 F2114 YY*
16401405-C-G 14289525-C-G PF4555 CTS5628 YY*
15512225-AG-A 13400345-AG-A *
6701239-A-G 6833198-A-G YY*
16803249-A-C 14691369-A-C YSC0001306 PF4559 F2276 YY*
16839810-C-T 14727930-C-T FGC1575 CTS6349 YY*
16966024-T-C 14854144-T-C FGC1577 F2345 YY*
17012180-C-A 14900300-C-A YSC0000289 PF3546 L748 YY*
17040447-C-A 14928567-C-A FGC1584 F2366 YY*
17200869-G-A 15088989-G-A FGC1565 CTS6932 YY*
17367321-C-A 15255441-C-A JYSC0001286 PF4563 CTS7229 YY*
6868118-A-G 7000077-A-G YY*
6912992-G-T 7044951-G-T CTS623 FGC37 YY*
17605948-A-C 15494068-A-C YSC0000197 PF4567 YY*
7647357-A-G 7779316-A-G YY*
9872484-T-C 10034875-T-C YSC0001301 F1632 YY*
9872486-C-T 10034877-C-T F1633 YY*
9872488-T-C 10034879-T-C YSC0001302 PF4523 F1634 YY*
13676377-G-T 11520701-G-T FGC1574 *
14031334-T-A 11910628-T-A IJPF3535 P125 M429 YY*
14084606-G-T 11963900-G-T YSC0000165 PF4535 YY*
7671535-T-C 7803494-T-C V1356 YY*
14144593-A-G 12023887-A-G PF3536 P129 YY*
15472863-T-C 13360983-T-C YY*
7220727-G-A 7352686-G-A YY*
14171812-T-G 12051106-T-G CTS2071 YY*
7177189-A-G 7309148-A-G YY*
14264859-G-A 12144153-G-A YSC0001303 S4968 F1744 YY*
14330570-A-T 12209864-A-T YY*
14476551-T-A 12355820-T-A PF4538 CTS2769 YY*
14705645-G-A 12593711-G-A F1826 YY*
15278569-G-A 13166658-G-A PF4544 CTS3938 YY*
17510402-C-G 15398522-C-G YY*
6390285-C-A 6522244-C-A *
8906357-C-T 9038316-C-T F1460 *
21858778-C-A 19696892-C-A PF4595 YY*
21144432-C-A 18982546-C-A S22619 Z7820 YY*
21144433-T-A 18982547-T-A F4300 YY*
21225770-C-G 19063884-C-G P126 FGC1566 YY*
21281892-C-A 19120006-C-A PF4591 YY*
21461202-G-A 19299316-G-A PF3562 YY*
21507294-C-G 19345408-C-G YY*
21730257-G-C 19568371-G-C YY*
22118776-A-G 19956890-A-G PF4598 YY*
21097847-C-T 18935961-C-T PF4588 F3119 YY*
22229801-C-T 20067915-C-T Z7823 DYZ19 *
22234109-T-G 20072223-T-G FGC1612 Z7824 DYZ19 *
22465433-G-C 20303547-G-C Z7829 DYZ19 *
22484240-G-T 20322354-G-T FGC1592 DYZ19 *
2887824-A-C 3019783-A-C YY*
22506256-G-T 20344370-G-T PF4605 DYZ19 *
22708656-C-T 20546770-C-T YSC0001315 PF4608 F3347 YY*
22749853-A-C 20587967-A-C JPF4609 PAGES00016 M304 Page16 YY*
21144431-T-A 18982545-T-A PF4589 F4299 YY*
21040853-A-C 18878967-A-C F3102 Y*
17637446-T-C 15525566-T-C PF4568 CTS7738 YY*
18695159-C-T 16583279-C-T PF4579 F2817 YY*
17660074-T-G 15548194-T-G YY*
17693210-A-G 15581330-A-G PF4569 CTS7832 YY*
18257026-G-A 16145146-G-A YSC0001309 F2746 *
18552360-G-C 16440480-G-C PF4576 F2769 Y*
18567169-T-G 16455289-T-G PF4577 CTS8938 YY*
18588650-A-G 16476770-A-G PF4578 CTS8974 YY*
18633084-C-A 16521204-C-A YSC0001311 F2794 V3346 YY*
18773505-C-T 16661625-C-T PF4580 F2839 YY*
20837553-T-C 18675667-T-C P4_Gap *
18804950-C-T 16693070-C-T PF4581 YY*
19166861-T-C 17054981-T-C PF3554 P123 F4281 Y*
19179335-T-C 17067455-T-C PF4584 P209 Y*
19194316-C-T 17082436-C-T YSC0001312 PF4585 F2973 YY*
4352151-A-G 4484110-A-G A19936 *
19360192-C-T 17248312-C-T V4038 YY*
19508788-G-A 17396908-G-A YSC0001313 PF4587 F3074 YY*
23069523-A-G 20907637-A-G FGC1572 F3402 S2 YY*
9815201-T-C 9977592-T-C PF4521 YY*
16475682-C-T 14363802-C-T YSC0001305 PF4558 F2174 YY*
8888300-G-A 9020259-G-A YSC0001300 FGC1583 F1450 Y*
18831084-G-A 16719204-G-A YSC0000966 V3529 YY*
7762947-C-T 7894906-C-T YY*
21456883-A-G 19294997-A-G YY*
7190277-A-G 7322236-A-G FGC1579 F922 YY*
22024891-CA-C 19863005-CA-C *
2902839-C-T 3034798-C-T Z43714 YY*
4874629-C-T 5006588-C-T *
7292720-T-C 7424679-T-C PF4509 F4072 S34 YY*
22072340-G-C 19910454-G-C YY*
7771131-A-G 7903090-A-G YY*
20812228-C-T 18650342-C-T P4_Gap *
21603164-G-T 19441278-G-T YY*
22003770-A-G 19841884-A-G YSC0000227 F597 YY*
19315988-T-A 17204108-T-A V4004 YY*
7048870-G-A 7180829-G-A CTS852 PF4504 YY*
23342709-A-C 21180823-A-C YY*
19144375-T-C 17032495-T-C YY*
19067469-T-C 16955589-T-C YSC0000270 V3732 YY*
22808370-T-C 20646484-T-C CTS10859 YY*
22514081-T-G 20352195-T-G Y*
7180976-G-A 7312935-G-A PF4508 CTS1068 YY*
18964263-G-A 16852383-G-A YY*
7065239-T-C 7197198-T-C YSC0000064 PF4505 YY*
21570974-A-G 19409088-A-G YY*
7126936-G-T 7258895-G-T YSC0000066 PF4506 Y*
23993156-C-A 21847009-C-A *
21811108-T-G 19649222-T-G YY*
8679843-T-G 8811802-T-G YY*
8590752-C-T 8722711-C-T PF3526 P127 YY*
23550924-C-A 21389038-C-A YY*
8558969-A-T 8690928-A-T PF3525 P130 S22 YY*
8418927-G-C 8550886-G-C PF4518 F1181 S35 YY*
8393849-G-A 8525808-G-A PF4517 F1168 YY*
8393499-G-A 8525458-G-A YSC0001296 PF4516 F1167 YY*
23489203-T-C 21327317-T-C YY*
7854412-G-A 7986371-G-A V1478 YY*
8222299-T-C 8354258-T-C L403 FGC1573 YY*
8308114-G-A 8440073-G-A JPF4515 YY*
7694266-G-A 7826225-G-A YSC0000070 FGC1564 YY*
7922133-G-A 8054092-G-A Y1866 FGC1587 YY*
23979899-T-C 21833752-T-C Y*
8687145-G-T 8819104-G-T PF4520 F1381 YY*
7517252-G-T 7649211-G-T YSC0001321 PF4511 Y*
14627045-C-A 12515113-C-A **
14561314-C-T 12449515-C-T **
14574520-A-G 12462720-A-G **
14743154-C-CAAA 12631222-C-CAAA 19×A**
22950323-A-C 20788437-A-C **
14660393-G-C 12548458-G-C **
15064957-C-A 12953049-C-A **
14761266-G-C 12649335-G-C **
22793973-A-G 20632087-A-G ZS6495 **
14789408-G-A 12677479-G-A **
20693304-A-C 18531418-A-C P4_Prx **
14984457-A-G 12872525-A-G Y92699 **
14593078-T-A 12481278-T-A **
14622795-C-A 12510993-C-A **
21211479-A-T 19049593-A-T **
14985977-T-A 12874045-T-A **
14743152-CT-C 12631220-CT-C **
14799840-A-T 12687911-A-T **
23345668-C-A 21183782-C-A **
14769364-GT-G 12657433-GT-G **
15333439-C-A 13221557-C-A **
15073137-C-A 12961227-C-A **
15622689-T-G 13510809-T-G **
16116638-G-A 14004758-G-A P8_Prx **
16029625-C-A 13917745-C-A **
16023232-A-G 13911352-A-G **
16006083-A-G 13894203-A-G **
15969706-C-A 13857826-C-A **
20693259-T-C 18531373-T-C P4_Prx **
15742050-T-C 13630170-T-C **
20693276-T-A 18531390-T-A P4_Prx **
15729193-G-C 13617313-G-C **
22360944-C-A 20199058-C-A DYZ19 **
15648836-C-G 13536956-C-G **
15641868-A-T 13529988-A-T **
20693283-G-C 18531397-G-C P4_Prx **
15635848-T-C 13523968-T-C **
23259220-C-A 21097334-C-A **
21283417-T-G 19121531-T-G **
15592788-G-A 13480908-G-A S27399 **
15584542-T-C 13472662-T-C **
23285409-C-A 21123523-C-A **
15439859-G-C 13327979-G-C **
23291001-C-T 21129115-C-T **
15420064-A-C 13308184-A-C **
15333462-A-T 13221580-A-T **
15333459-T-C 13221577-T-C **
15333441-A-G 13221559-A-G **
15333434-A-G 13221552-A-G **
23306522-A-G 21144636-A-G **
15252727-G-T 13140813-G-T **
15239589-T-C 13127675-T-C **
15209280-C-A 13097366-C-A **
14556396-T-A 12444597-T-A **
14246642-G-A 12125936-G-A Y90806 **
14511814-G-A 12400019-G-A **
21003205-A-T 18841319-A-T P4_Dst **
13218934-T-A 11063258-T-A **
13244883-G-T 11089207-G-T **
23590957-GT-C 21429071-GT-C **
13324860-G-T 11169184-G-T **
13331566-A-C 11175890-A-C **
13446482-T-A 11290806-T-A **
13446530-CATTCCAT-C 11290854-CATTCCAT-C **
11037091-T-G **
13446539-CCAT-C 11290863-CCAT-C **
13446551-A-C 11290875-A-C **
10760409-C-G **
20974870-C-A 18812984-C-A P4_Dst **
23421068-G-T 21259182-G-T **
13631280-A-T 11475604-A-T **
11642978-G-T **
13199284-G-A 11043608-G-A **
11032509-C-A **
11663068-G-T **
10898759-G-T **
10841063-A-C **
10841080-T-C **
10888054-T-G **
10888058-T-C **
10888145-G-T **
10894454-T-C **
10924817-C-G **
11022241-C-A **
10926561-C-A **
10958046-CACAG-C **
10980620-T-A **
10990663-C-T **
11009975-T-G **
11013998-A-T **
11014647-T-G **
11649311-A-C **
13809465-AT-A 11688759-AT-A **
14451093-A-C 12330366-A-C **
16119502-A-ACT 14007622-A-ACT P8_Prx **
14067951-C-A 11947245-C-A **
20751919-A-T 18590033-A-T P4_Prx **
14073894-T-C 11953188-T-C **
22730368-A-G 20568482-A-G **
14073908-G-T 11953202-G-T **
21095738-A-C 18933852-A-C **
14269817-A-C 12149111-A-C **
14029978-G-T 11909272-G-T **
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3876959-T-G 4008918-T-G **
3933135-T-C 4065094-T-C **
3953362-G-T 4085321-G-T **
4063129-C-G 4195088-C-G **
3205858-C-G 3337817-C-G 15×A**
3119320-C-A 3251279-C-A **
4063185-A-C 4195144-A-C **
13872222-C-T 11751516-C-T **
8274028-C-A 8405987-C-A **
24271526-T-C 22125379-T-C P3_b1 **
24271458-T-TGC 22125311-T-TGC P3_b1 **
6801164-C-A 6933123-C-A **
17584238-A-C 15472358-A-C **
10841217-C-A **
13217234-C-T 11061558-C-T **
17276179-A-T 15164299-A-T **
24016988-T-TG 21870841-T-TG **
3119267-C-A 3251226-C-A **
2649789-CGA-C 2781748-CGA-C **
2665508-C-T 2797467-C-T **
2702340-A-T 2834299-A-T **
2745307-C-T 2877266-C-T **
2785220-A-T 2917179-A-T **
2842946-T-C 2974905-T-C **
2979614-G-T 3111573-G-T **
56874067-T-A **
6477615-G-A 6609574-G-A **
4063155-G-C 4195114-G-C **
4063196-A-T 4195155-A-T **
6147611-G-T 6279570-G-T IR3_Dst **
5967596-G-A 6099555-G-A **
5976621-G-A 6108580-G-A **
5991784-C-A 6123743-C-A **
6028534-T-G 6160493-T-G **
6094664-A-C 6226623-A-C **
6112745-C-A 6244704-C-A **
6112926-G-C 6244885-G-C **
6177398-T-C 6309357-T-C IR3_Dst **
5815377-G-C 5947336-G-C **
6179558-T-C 6311517-T-C IR3_Dst **
6179605-T-A 6311564-T-A IR3_Dst **
6286141-A-C 6418100-A-C IR3_Dst **
6286160-A-G 6418119-A-G IR3_Dst **
6286179-T-G 6418138-T-G IR3_Dst **
6357771-C-T 6489730-C-T **
6384642-T-C 6516601-T-C **
6458311-A-T 6590270-A-T **
4073246-G-T 4205205-G-T **
5881007-C-A 6012966-C-A **
5815271-T-C 5947230-T-C **
5815217-T-A 5947176-T-A **
4136658-A-C 4268617-A-C **
4158050-CTCATA-C 4290009-CTCATA-C **
4208362-T-A 4340321-T-A **
4241853-C-T 4373812-C-T **
4395386-C-A 4527345-C-A **
4442539-T-G 4574498-T-G **
4540665-G-A 4672624-G-A **
4873745-A-C 5005704-A-C **
4899683-C-A 5031642-C-A **
4920071-A-C 5052030-A-C **
4920116-T-C 5052075-T-C **
5331632-T-G 5463591-T-G **
5394805-G-C 5526764-G-C **
5495495-G-T 5627454-G-T **
5798435-G-T 5930394-G-T **
22520740-G-A 20358854-G-A **
24877156-G-A 22731009-G-A g1 ***
23786180-T-C 21624294-T-C Z35815 ***
23054317-C-A 20892431-C-A ***
56839391-G-T ***
23400066-C-A 21238180-C-A ***
28792463-G-A 26646316-G-A ***
24892913-A-G 22746766-A-G g1 ***
8214827-T-C 8346786-T-C A19938 ***
22633211-C-T 20471325-C-T Y109340 ***
9173558-C-A 9335949-C-A FGC45051 ***
15055079-A-T 12943170-A-T Y1885 FGC1581 CTS3597 ***
16294038-CATTTT-C 14182158-CATTTT-C ***
18950820-C-A 16838940-C-A CTS9533 PF4582 ***
18952077-G-A 16840197-G-A CTS9538 PF4919 ***
19007619-C-CATAT 16895739-C-CATAT 10×AT***
21923739-A-T 19761853-A-T FGC1599 S23720 Z7822 ***
22024569-G-A 19862683-G-A PF4597 ***
28542858-T-A 26396711-T-A PF4992 ***
22319648-T-G 20157762-T-G BY1986 DYZ19 ***
6129336-T-A 6261295-T-A PF4501 ***
13453688-C-T 11298012-C-T ***
14628068-T-C 12516136-T-C PF4962 F1810 ***
13694920-C-A 11539244-C-A BY26273 ***
18206455-A-G 16094575-A-G Y12587 Z28448 ***
22436768-G-C 20274882-G-C BY26518 DYZ19 ***
22441014-A-T 20279128-A-T DYZ19 ***
13449554-C-T 11293878-C-T ***
22845109-T-TA 20683223-T-TA ***
28809633-C-T 26663486-C-T BY12618 ***
58978446-C-G 56832299-C-G ***
14969634-T-G 12857709-T-G PF4908 PAGES00028 M172 Page28 ***
9031416-ATT-A,AT 9193807-ATT-A,AT 11×T***
13821157-TG-T 11700451-TG-T ***
7570822-C-G 7702781-C-G ***
7863189-A-G 7995148-A-G ***
9852981-G-A 10015372-G-A A619 ***
18744476-C-T 16632596-C-T CTS9200 V3466 ***
19267344-A-C 17155464-A-C FGC201 ***
21661676-G-T 19499790-G-T FGC190 ***
21761275-G-T 19599389-G-T ***
9852978-G-A 10015369-G-A BY22877 ***
18617596-T-C 16505716-T-C CTS9018 FGC188 ***
5084471-GTTTC-G 5216430-GTTTC-G ***
15277466-G-A 13165555-G-A YSC0001275 PF4543 CTS3936 ***
9764339-A-G 9926730-A-G BY23177 ***
15607864-T-A 13495984-T-A PF4548 CTS4356 ***
16434671-C-T 14322791-C-T PF4557 CTS5691 ***
17136854-T-C 15024974-T-C PF4560 F2390 ***
17996247-A-G 15884367-A-G PF4572 P7_Gap ***
18084124-T-A 15972244-T-A PF4573 F2707 ***
21329083-T-C 19167197-T-C YSC0001314 PF4592 F3176 ***
3389009-C-T 3520968-C-T ***
7232850-TTATA-T 7364809-TTATA-T ***
7719447-C-CG 7851406-C-CG Y2387 8×G***
8677159-TGAG-T 8809118-TGAG-T ***
8708375-A-G 8840334-A-G BY3394 15×TG***
13459498-CCCATT-C 11303822-CCCATT-C ***
22507842-G-T 20345956-G-T DYZ19 ***
22483678-G-T 20321792-G-T DYZ19 ***
17514236-C-A 15402356-C-A ***
13482594-C-T 11326918-C-T ***
13526316-C-A 11370640-C-A ***
13846815-G-A 11726109-G-A ***
14858425-T-A 12746491-T-A Y12613 Z28470 ***
15439097-A-G 13327217-A-G Y93803 ***
15821511-C-A 13709631-C-A ***
15593179-C-T 13481299-C-T ***
16386361-AT-A 14274481-AT-A ***
17799012-C-A 15687132-C-A ***
9403255-T-A 9565646-T-A ***
18067456-AAAGAAAGG-A 15955576-AAAGAAAGG-A ***
18853070-C-G 16741190-C-G Y102871 ***
19558743-G-A 17446863-G-A Y105121 ***
20066675-C-T 17954795-C-T P5_Dst ***
21797070-A-G 19635184-A-G Z29422 S23560 ***
21852628-C-A 19690742-C-A ***
21929622-A-C 19767736-A-C Y107923 ***
22241004-A-T 20079118-A-T DYZ19 ***
22437617-G-A 20275731-G-A DYZ19 ***
22439133-T-A 20277247-T-A DYZ19 ***
13257505-G-T 11101829-G-T ***
8446218-A-C 8578177-A-C Y86887 ***
24116274-C-T 21970127-C-T P3_b1 ***
13489482-C-G 11333806-C-G ***
58978432-C-G 56832285-C-G ***
14315406-G-T 12194700-G-T ***
56850975-G-T ***
14825721-T-. 12713788-G-T ***
9839535-G-A 10001926-G-A ***
6773354-C-A 6905313-C-A ***
13460997-G-C 11305321-G-C ***
7148035-C-A 7279994-C-A ***
10986811-C-A ***
10754934-CTCCATTCCAT-C ***
7927984-G-T 8059943-G-T ***
13257524-C-A 11101848-C-A ***
11015169-ATATCC-A,ATATTC ***
7925833-GT-G,GTT 8057792-GT-G,GTT 11×T***
21895593-A-T 19733707-A-T ***
5412097-A-G 5544056-A-G ***
2810388-TTG-T,TT 2942347-TTG-T,TT ***
2813000-C-A 2944959-C-A ***
6368879-G-T 6500838-G-T ***
7000546-A-G 7132505-A-G ***
7197570-ATTTTT-A,ATT 7329529-ATTTTT-A,ATT 19×T***
7226938-C-A 7358897-C-A ***
15482716-C-G 13370836-C-G Y93889 ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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