Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > L1335/S530 > L1065 > Z16325 > S744 > S764 > A13318 > A13315 > A14498

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY3
292979
BigY2
292979
FTDNA
292979
Manual
Edits
24602403-G-A 22456256-G-A P3_t2 A+
19616979-G-T 17505099-G-T BY1564 P5_Prx YA*
6325051-C-T 6457010-C-T FT83278 IR3_Dst A*
25994454-C-T 23848307-C-T P1_Y1 A*
26329573-G-A 24183426-G-A P1_Y1 A*
20677960-T-C 18516074-T-C BY1679 P4_Prx A*
19922136-T-G 17810256-T-G BY1626 P5_Prx A*
19893186-A-G 17781306-A-G BY1618 P5_Prx A*
18315965-G-A 16204085-G-A BY121434 P6_Prx A*
16116284-T-C 14004404-T-C BY1224 P8_Prx A*
6320961-A-T 6452920-A-T ZS2995 IR3_Dst A*
20041221-G-A 17929341-G-A P5_Prx A*
56833497-C-T A*
6184013-T-G 6315972-T-G IR3_Dst A*
7431134-A-G 7563093-A-G YA*
6151530-G-A 6283489-G-A BY59335 IR3_Dst A*
25556066-T-G 23409919-T-G P1_gr1 A*
19573693-A-G 17461813-A-G ZS1823 P5_Prx YA*
19790628-A-G 17678748-A-G P5_Prx A*
26080193-G-A 23934046-G-A P1_Y1 A*
25888890-A-G 23742743-A-G P1_Y1 A*
25883481-A-G 23737334-A-G P1_Y1 A*
28817136-G-A 26670989-G-A A*
19648849-C-T 17536969-C-T P5_Prx A*
19795881-C-T 17684001-C-T P5_Prx A*
28817850-T-A 26671703-T-A A*
19836014-G-A 17724134-G-A P5_Prx A*
28817874-G-T 26671727-G-T A*
28817615-A-T 26671468-A-T A*
28817435-A-G 26671288-A-G A*
19865466-G-GT 17753586-G-GT P5_Prx A*
17383849-T-TGATGA 15271969-T-TGATGA 8×GATGAA*
19932400-C-T 17820520-C-T P5_Prx A*
26271608-A-C 24125461-A-C Y2279_1 P1_Y1 A*
6387672-G-C 6519631-G-C BY182559 A*
6361637-A-G 6493596-A-G BY40446 A*
6206985-A-G 6338944-A-G BY86 ZS1572 IR3_Dst A*
26223714-A-T 24077567-A-T P1_Y1 A*
14435792-G-. 12315065-C-G A*
14435790-T-. 12315063-C-T A*
20647539-G-T 18485653-G-T A202 ZS2500 P4_Prx A*
26350200-T-G 24204053-T-G P1_Y1 A*
19758823-C-T 17646943-C-T P5_Prx A*
26035145-T-C 23888998-T-C P1_Y1 A*
19920004-G-A 17808124-G-A E766 P5_Prx A*
26151433-A-G 24005286-A-G BY46203 P1_Y1 A*
26227330-G-A 24081183-G-A P1_Y1 A*
18351965-T-G 16240085-T-G E898 P6_Prx A*
23886613-T-C 21724727-T-C Y112469 YA*
23886605-G-C 21724719-G-C Y112468 YA*
28817738-T-G 26671591-T-G A*
6293077-G-GT 6425036-G-GT IR3_Dst 8×TA*
20706684-G-T 18544798-G-T E763 P4_Prx A*
25983781-C-T 23837634-C-T BY2426 P1_Y1 A*
22256982-T-G 20095096-T-G BY1881 DYZ19 A*
19617659-C-A 17505779-C-A P5_Prx YA*
22314247-T-G 20152361-T-G DYZ19 A*
23232103-G-T 21070217-G-T Y111014 YA*
6106629-T-G 6238588-T-G BY16700 A*
6106896-C-T 6238855-C-T A16709 A*
6107138-A-G 6239097-A-G BY45851 A*
20632676-C-T 18470790-C-T E912 P4_Prx A*
20724484-G-A 18562598-G-A Z16738 P4_Prx A*
26216339-T-C 24070192-T-C A14887 P1_Y1 A*
28816761-T-C 26670614-T-C A*
20678187-C-T 18516301-C-T ZS4043 P4_Prx A*
20774539-A-G 18612653-A-G P4_Prx A*
24287968-G-A 22141821-G-A BY2236 A15814 P3_t1 A*
20492878-T-TC 18330992-T-TC P5_Dst 9×CA*
18314941-C-A 16203061-C-A Z24322 P6_Prx A*
24278853-G-C 22132706-G-C E730 P3_t1 A*
7431124-T-C 7563083-T-C YA*
26242875-A-G 24096728-A-G FGC35722 P1_Y1 A*
23714782-G-T 21552896-G-T SUR66 A*
24285378-G-A 22139231-G-A BY2235 Z38739 P3_t1 A*
22470209-A-G 20308323-A-G PF4932 DYZ19 A*
56836332-C-T A*
4968655-T-G 5100614-T-G FGC283 A*
22294691-G-A 20132805-G-A FGC31633 BY1947 DYZ19 A*
22220543-C-T 20058657-C-T BY45196 DYZ19 A*
24254847-T-G 22108700-T-G P3_b1 A*
7328021-G-GTGATGGTGATGATGATA 7459980-G-GTGATGGTGATGATGATA A*
26230223-T-G 24084076-T-G BY25081 P1_Y1 A*
19782963-A-G 17671083-A-G BY1591 P5_Prx A*
26130618-G-A 23984471-G-A BY2449 P1_Y1 A*
6171969-T-C 6303928-T-C IR3_Dst A*
28817542-T-C 26671395-T-C A*
13687302-G-A 11531626-G-A A*
28816646-A-T 26670499-A-T A*
20709307-A-G 18547421-A-G BY1683 P4_Prx A*
20661846-C-G 18499960-C-G ZS5828 P4_Prx A*
19834589-G-T 17722709-G-T ZS3710 P5_Prx A*
16121606-G-A 14009726-G-A Z18268 P8_Prx A*
19829153-G-A 17717273-G-A ZS4558 P5_Prx A*
26114906-A-G 23968759-A-G P1_Y1 A*
6254592-G-A 6386551-G-A IR3_Dst A*
22476651-A-C 20314765-A-C BY26567 DYZ19 A*
9530559-A-C 9692950-A-C IR3_Prx A*
26063747-A-G 23917600-A-G P1_Y1 A*
18354351-A-G 16242471-A-G FT43017 P6_Prx A*
20344287-G-GA 18182401-G-GA P5_Dst 9×AA*
20587451-G-GA 18425565-G-GA P5_Dst 9×AA*
20793453-A-T 18631567-A-T P4_Prx 12×ATA*
24307674-A-G 22161527-A-G P3_t1 A*
20013059-G-T 17901179-G-T BY25022 P5_Prx A*
18345615-G-T 16233735-G-T Z18430 P6_Prx A*
28817196-G-C 26671049-G-C A*
26067517-A-G 23921370-A-G P1_Y1 A*
19700790-T-G 17588910-T-G P5_Prx A*
13450033-C-T 11294357-C-T A*
18300737-C-T 16188857-C-T P6_Prx A*
8233186-T-C 8365145-T-C V1741 YY+
4592481-T-A 4724440-T-A FT110180 +
28462323-T-G 26316176-T-G FT112333 +
23444765-T-A 21282879-T-A FT112282 YY+*+
15714149-A-G 13602269-A-G Y94532 YY+
19070676-G-T 16958796-G-T FT111919 YY+*+
21929487-A-T 19767601-A-T Y107921 YY+
14415575-A-. 12294872-T-A M11806M11806 +
7461399-C-G 7593358-C-G CTS1529 IR1_L +
7190024-A-G 7321983-A-G PF4950 CTS1085 YY+
19812910-C-T 17701030-C-T BY53454 P5_Prx +
10046063-G-A 10208454-G-A BY54003 +
23742788-G-A 21580902-G-A Y112199 *
23255729-A-T 21093843-A-T PF4620 CTS11765 YY*
8988909-C-T 9151300-C-T PF4900 Y*
8738272-C-T 8870231-C-T PF4898 YY*
18588650-A-G 16476770-A-G PF4578 CTS8974 YY*
8474549-T-A 8606508-T-A PF4958 F4106 YY*
23273016-G-A 21111130-G-A YSC0001251 PF4621 CTS11787 YY*
8465758-C-G 8597717-C-G F1227 YY*
18804950-C-T 16693070-C-T PF4581 YY*
8420738-G-C 8552697-G-C PF4957 F1183 YY*
23966451-G-T 21820304-G-T Y112513 Y*
18567169-T-G 16455289-T-G PF4577 CTS8938 YY*
18633084-C-A 16521204-C-A YSC0001311 F2794 V3346 YY*
23251880-A-C 21089994-A-C YSC0000239 PF4619 YY*
23250894-C-T 21089008-C-T YSC0001250 PF4618 CTS11750 YY*
8028804-A-AT 8160763-A-AT *
8017527-A-AATAG 8149486-A-AATAG *
7850169-G-A 7982128-G-A M4232 YY*
7839500-T-A 7971459-T-A PF4955 YY*
7813674-G-A 7945633-G-A Z7755 YY*
7813673-T-A 7945632-T-A PF4954 YY*
18695159-C-T 16583279-C-T PF4579 F2817 YY*
18773505-C-T 16661625-C-T PF4580 F2839 YY*
7771358-C-T 7903317-C-T J2S321 PF4895 L228 F4087 YY*
8351025-G-A 8482984-G-A PF4897 F4095 YY*
6523536-T-A 6655495-T-A BY25991 *
9384191-G-C 9546582-G-C FGC7804 Y*
15704139-C-T 13592259-C-T PF4966 CTS4540 YY*
17032059-G-T 14920179-G-T F4221 YY*
17030339-A-AAC 14918459-A-AAC *
16991073-GTT-G 14879193-GTT-G 13×T*
16739675-C-T 14627795-C-T FGC2795 Z7760 YY*
16542685-C-G 14430805-C-G PF4913 CTS5904 YY*
16518740-G-A 14406860-G-A PF4969 CTS5867 YY*
23443976-A-G 21282090-A-G YSC0001253 CTS12047 YY*
18519121-C-G 16407241-C-G Y1945 FGC1598 P6_Dst *
18552360-G-C 16440480-G-C PF4576 F2769 Y*
16459438-G-A 14347558-G-A J2PF4912 CTS5728 YY*
23033002-A-G 20871116-A-G Y110380 YY*
16310787-T-G 14198907-T-G PF4968 CTS5482 YY*
23059418-C-G 20897532-C-G Y110468 YY*
15998551-A-C 13886671-A-C CTS5066 YY*
15632637-G-T 13520757-G-T PF5096 CTS4403 YY*
10038100-G-A 10200491-G-A FGC1604 Z7814 *
15610713-G-T 13498833-G-T PF4965 CTS4360 YY*
15468045-T-G 13356165-T-G PF4964 CTS4195 YY*
15317764-A-T 13205870-A-T Y12710 YY*
15203000-C-G 13091086-C-G PF4963 CTS3816 YY*
23301413-T-TC 21139527-T-TC *
14244185-G-GA 12123479-G-GA 10×A*
14106407-G-A 11985701-G-A FGC2793 Z7759 YY*
13843938-T-A 11723232-T-A BY26338 *
13832032-G-T 11711326-G-T PF4905 *
13717275-AGAATG-A 11561599-AGAATG-A 8×GAATG*
13695869-C-T 11540193-C-T PF4904 *
13684562-C-T 11528886-C-T FGC2790 Y29592 *
19166861-T-C 17054981-T-C PF3554 P123 F4281 Y*
13204459-G-T 11048783-G-T PF4527 *
23533112-C-T 21371226-C-T Y111793 YY*
7432989-A-G 7564948-A-G F4074 Y*
19179335-T-C 17067455-T-C PF4584 P209 Y*
21858778-C-A 19696892-C-A PF4595 YY*
21040853-A-C 18878967-A-C F3102 Y*
21097847-C-T 18935961-C-T PF4588 F3119 YY*
21717648-ATGTG-A 19555762-ATGTG-A 17×TG*
21144431-T-A 18982545-T-A PF4589 F4299 YY*
17094913-A-AT 14983033-A-AT S452 10×T*
21144432-C-A 18982546-C-A S22619 Z7820 YY*
21144433-T-A 18982547-T-A F4300 YY*
21225770-C-G 19063884-C-G P126 FGC1566 YY*
21281892-C-A 19120006-C-A PF4591 YY*
21461202-G-A 19299316-G-A PF3562 YY*
21507294-C-G 19345408-C-G YY*
19305394-G-A 17193514-G-A BY11781 A3149SK646 Y12712 YY*
21730257-G-C 19568371-G-C YY*
22118776-A-G 19956890-A-G PF4598 YY*
15642277-A-AG 13530397-A-AG 8×G*
17191877-C-A 15079997-C-A F2418 PF4972 YY*
22229801-C-T 20067915-C-T Z7823 DYZ19 *
22234109-T-G 20072223-T-G FGC1612 Z7824 DYZ19 *
22465433-G-C 20303547-G-C Z7829 DYZ19 *
18090737-G-GA 15978857-G-GA FGC47883Y2338 8×A*
21126140-T-TATC 18964254-T-TATC *
22484240-G-T 20322354-G-T FGC1592 DYZ19 *
22506256-G-T 20344370-G-T PF4605 DYZ19 *
22708656-C-T 20546770-C-T YSC0001315 PF4608 F3347 YY*
22749853-A-C 20587967-A-C JPF4609 PAGES00016 M304 Page16 YY*
22785217-G-A 20623331-G-A YSC0001316 PF4611 F3358 YY*
22808236-G-A 20646350-G-A Y19795PF4612 CTS10858 YY*
16560428-C-T 14448548-C-T S18476 SK2198 YY*
13683282-A-AGAATG 11527606-A-AGAATG 7×GAATG*
8391564-TA-T 8523523-TA-T 10×A*
22866703-C-G 20704817-C-G YY*
7680253-C-G 7812212-C-G PF4953 YY*
23088142-T-C 20926256-T-C YSC0000236 PF4616 L778 YY*
7676739-C-T 7808698-C-T PF4952 YY*
16261215-A-G 14149335-A-G J2PF4910 F2113 YY*
7431164-A-C 7563123-A-C CTS1477 Y*
23163701-C-A 21001815-C-A PF4617 CTS11571 Y*
7240092-G-GC 7372051-G-GC *
7234782-C-T 7366741-C-T CTS1146 YY*
7158459-A-G 7290418-A-G PF4949 CTS1030 YY*
7068942-G-A 7200901-G-A PF4893 CTS886 YY*
19194316-C-T 17082436-C-T YSC0001312 PF4585 F2973 YY*
6864895-G-C 6996854-G-C CTS585 YY*
6854256-C-T 6986215-C-T PF4948 F841 YY*
6824785-G-A 6956744-G-A PF4892 CTS523 YY*
24426007-C-T 22279860-C-T PF3568 F3629 Y*
6644611-T-C 6776570-T-C FGC3272 YY*
20837553-T-C 18675667-T-C P4_Gap *
6388343-A-C 6520302-A-C FGC21990 SUR9 *
6363373-TC-T 6495332-TC-T *
19360192-C-T 17248312-C-T V4038 YY*
19508788-G-A 17396908-G-A YSC0001313 PF4587 F3074 YY*
18690975-T-TTAGATAGA 16579095-T-TTAGATAGA 10×TAGA*
24413251-T-C 22267104-T-C Y112787 Y*
24418922-T-A 22272775-T-A Y112799 Y*
6737522-T-TA 6869481-T-TA Y2314 8×A*
2751678-A-G 2883637-A-G M410 PF4941 YY*
8034983-G-GA 8166942-G-GA Y2288 9×A*
2736889-T-C 2868848-T-C CTS113 PF4884 YY*
8992300-A-AT 9154691-A-AT Y2319 *
23069523-A-G 20907637-A-G FGC1572 F3402 S2 YY*
22909101-C-T 20747215-C-T YSC0001317 PF3566 F3368 YY*
17042047-C-T 14930167-C-T CTS6660 PF4971 YY*
20821939-AGTGT-A 18660053-AGTGT-A P4_Gap 16×GT*
17614366-G-A 15502486-G-A CTS7683 PF5100 P354 YY*
18062662-GT-G 15950782-GT-G *
18700633-T-C 16588753-T-C Y102461 YY*
18571782-G-T 16459902-G-T YY*
13455559-T-TATTCC 11299883-T-TATTCC 8×ATTCC*
18223532-G-T 16111652-G-T Y101699 Y*
18209987-C-A 16098107-C-A BZ2156 YY*
18204828-T-A 16092948-T-A Y101629 YY*
18144098-A-G 16032218-A-G Y101436 YY*
17942135-G-A 15830255-G-A Y100717 YY*
19279949-C-T 17168069-C-T Y104252 YY*
17674241-A-G 15562361-A-G Y99894 YY*
17575022-T-C 15463142-T-C Y99585 YY*
17506580-G-A 15394700-G-A Z43525 YY*
17437897-A-G 15326017-A-G Y99147 YY*
17198172-G-A 15086292-G-A S19344 YY*
16912390-T-C 14800510-T-C S18969 YY*
16713590-A-G 14601710-A-G Y12608 Z28506 YY*
18843248-A-C 16731368-A-C Z38471 YY*
19287789-T-G 17175909-T-G Y104281 YY*
16495217-T-C 14383337-T-C Y96507 YY*
14829196-C-. 12717263-T-C *
14433100-G-. 12312373-A-G *
14435818-T-. 12315091-C-T BY27142 *
14522828-G-. 12411029-A-G *
14556851-C-. 12445052-T-C *
14637352-T-. 12525421-C-T *
14641193-C-. 12529262-T-C *
12707114-T-TTTTG 4×TTTG*
14864191-T-. 12752257-C-T *
19365067-T-A 17253187-T-A Y104516 YY*
14898094-A-. 12786160-G-A *
12825888-ATTTTCTTTTC-A 12×TTTTC*
15026424-A-. 12914512-C-A *
15037433-C-. 12925521-G-C *
15078469-C-. 12966559-G-C *
15111148-G-. 12999235-C-G *
15172515-C-. 13060601-G-C *
13151440-GTAAATT-G *
16562341-T-C 14450461-T-C Y96694 YY*
16301002-GAAA-G 14189122-GAAA-G 18×A*
23181734-G-A 21019848-G-A FGC50134 Y*
8473471-C-T 8605430-C-T Y86997 YY*
4408708-G-A 4540667-G-A Y81987 *
4900990-A-G 5032949-A-G BY58402 *
9758599-T-G 9920990-T-G Y89132 Y*
9395103-C-T 9557494-C-T Y88902 YY*
8896229-T-C 9028188-T-C Y88317 Y*
8818259-C-T 8950218-C-T Y88087 YY*
8789365-G-T 8921324-G-T Y88007 YY*
8209989-A-C 8341948-A-C Y86125 YY*
3060895-GT-G 3192854-GT-G 10×T*
7773258-T-A 7905217-T-A Y12368 YY*
6892906-A-G 7024865-A-G Y82801 YY*
6932032-G-A 7063991-G-A Y82924 YY*
7458198-A-G 7590157-A-G Z28447 IR1_L *
7427219-C-CATATA 7559178-C-CATATA *
7011944-A-G 7143903-A-G Y83138 YY*
7151236-C-T 7283195-C-T Y83464 YY*
3366884-T-C 3498843-T-C BY57584 *
2882004-G-A 3013963-G-A Y81692 YY*
15786275-A-T 13674395-A-T Y12410 YY*
14374745-G-T 12254041-G-T Y91233 YY*
15766330-A-T 13654450-A-T Y94714 YY*
15273961-A-G 13162050-A-G Y93422 YY*
15152250-G-C 13040337-G-C Y93140 YY*
15020309-A-C 12908398-A-C Y12369 Z28492 YY*
14998767-C-T 12886852-C-T Y92744 YY*
16033921-G-GT 13922041-G-GT 9×T*
14750010-T-C 12638079-T-C Y92095 YY*
14308570-A-G 12187864-A-G Y91010 YY*
2827223-A-T 2959182-A-T Y81559 YY*
14174313-G-T 12053607-G-T S15572 YY*
14061028-C-T 11940322-C-T Y90186 YY*
17406449-G-GA 15294569-G-GA 8×A*
13837925-T-TGGAATGGAAC 11717219-T-TGGAATGGAAC *
26925-G-T FGC77793 *
7405011-TGATAGATA-T,TGATA 7536970-TGATAGATA-T,TGATA 12×GATA*
13479419-C-A 11323743-C-A BY86033 *
16641872-CATATATAT-C 14529992-CATATATAT-C 12×AT*
14416216-G-. 12295513-A-G *
6250465-A-C 6382424-A-C FGC45430 IR3_Dst *
22958276-G-T 20796390-G-T Y110222 YY*
23748578-A-G 21586692-A-G F4334 PF4990 Y*
22687035-A-G 20525149-A-G F3343 PF4933 YY*
22711465-T-C 20549579-T-C L212 PF4988 YY*
23421475-G-A 21259589-G-A CTS12014 YY*
23422150-G-C 21260264-G-C CTS12015 YY*
23484915-G-GCTCT 21323029-G-GCTCT *
23496991-CTA-C 21335105-CTA-C *
23538307-C-G 21376421-C-G PF4622 YY*
16447158-AACACACACAC-A 14335278-AACACACACAC-A 22×AC*
21970721-G-T 19808835-G-T L505 PF4987 YY*
22003743-A-G 19841857-A-G Y108114 YY*
21984356-G-C 19822470-G-C Y108058 YY*
21974500-C-T 19812614-C-T Y108022 YY*
2888689-A-G 3020648-A-G FGC12729 Z17920 YY*
21825703-C-A 19663817-C-A Y107615 YY*
21797127-T-G 19635241-T-G Y107510 YY*
6932998-T-C 7064957-T-C S9634 YY*
22287805-AT-A 20125919-AT-A DYZ19 *
21674327-A-G 19512441-A-G L559 PF4986 YY*
7835657-G-A 7967616-G-A Y12707 YY*
22419710-A-G 20257824-A-G FGC61616 DYZ19 *
17904970-C-T 15793090-C-T CTS8264 PF4974 YY*
18018684-C-G 15906804-C-G F2672 PF4975 Y*
18391106-T-A 16279226-T-A F2749 PF4574 YSC0001310 P6_Gap *
18615144-C-A 16503264-C-A F4259 PF4976 YY*
18772238-T-G 16660358-T-G F4266 PF4918 YY*
22487919-G-T 20326033-G-T BY26580 DYZ19 *
18978214-C-G 16866334-C-G J2F4272 PF4920 YY*
19038302-A-C 16926422-A-C P124 PF3553 YY*
21292707-A-T 19130821-A-T PF4925 YY*
19069070-G-A 16957190-G-A CTS9781 PF4978 YY*
19181063-T-A 17069183-T-A J2F4283 PF4922 Y*
19220113-C-A 17108233-C-A CTS10036 YY*
19283232-A-T 17171352-A-T CTS10134 PF4980 YY*
20816211-G-C 18654325-G-C PF5104 P4_Gap *
20836109-A-G 18674223-A-G PF5105 P4_Gap *
21148350-G-A 18986464-G-A PF4590 F3138 YY*
21258787-T-C 19096901-T-C PF4982 YY*
7557733-C-A 7689692-C-A S10343 YY*
8029507-A-G 8161466-A-G Y12407 YY*
20063195-T-C 17951315-T-C P5_Gap *
22563247-T-C 20401361-T-C Y12412 Z28495 YY*
21541669-T-C 19379783-T-C PF4985 YY*
21951018-T-C 19789132-T-C Z29418 S23761 YY*
22184959-C-T 20023073-C-T S24092 YY*
22302205-G-A 20140319-G-A Z7741 DYZ19 *
21158896-C-T 18997010-C-T Y105574 YY*
22457748-C-G 20295862-C-G Z29419 DYZ19 *
22469435-C-A 20307549-C-A Z7743 DYZ19 *
23033706-C-T 20871820-C-T PF5112 CTS11251 YY*
19535329-C-T 17423449-C-T Y105075 YY*
23584076-C-T 21422190-C-T Y12372 Z29420 YY*
28785890-G-T 26639743-G-T Z6054 *
13697583-G-A 11541907-G-A FGC58439 *
13455898-TCATTCCATTC-T 11300222-TCATTCCATTC-T 10×CATTC*
22562563-CAAATAAAT-C 20400677-CAAATAAAT-C BY3569 9×AAAT*
22440877-T-G 20278991-T-G BY218926 DYZ19 *
18393225-CATCTATCT-C 16281345-CATCTATCT-C P6_Gap 12×ATCT*
15677522-C-A 13565642-C-A BY54753 Y*
20810734-C-A 18648848-C-A Y12709 P4_Gap *
19171219-A-T 17059339-A-T Y12708 Z28440 Y*
8417425-T-G 8549384-T-G PF4956 F4100 YY*
15093231-C-G 12981319-C-G Z6047 YY*
8795954-C-A 8927913-C-A Y12408 YY*
8809001-T-C 8940960-T-C PF5091 YY*
21768103-CTTATT-C 19606217-CTTATT-C *
9480296-G-T 9642687-G-T F1559 *
13254909-A-G 11099233-A-G BY946 *
13455712-T-G 11300036-T-G FGC22229 *
13842823-G-T 11722117-G-T BY26337 *
15314086-C-A 13202191-C-A Y12409 Z28463 YY*
21303832-TCTC-T 19141946-TCTC-T *
15632863-T-C 13520983-T-C Z6048 YY*
15783184-G-A 13671304-G-A Z6049 S17591 YY*
16270041-G-T 14158161-G-T S18075 YY*
21372529-T-C 19210643-T-C Y106275 YY*
17195380-C-A 15083500-C-A Y12371 Z28480 YY*
17368140-C-T 15256260-C-T Y12609 Z29415 YY*
17495914-G-A 15384034-G-A F2502 PF4564 YY*
18620175-C-T 16508295-C-T Z29416 SK1322 S21087 YY*
18257026-G-A 16145146-G-A YSC0001309 F2746 *
15501988-G-GT 13390108-G-GT Y2289 *
17782178-G-C 15670298-G-C YY*
8070532-A-T 8202491-A-T YY*
7220727-G-A 7352686-G-A YY*
24394612-A-G 22248465-A-G Y*
8676330-A-G 8808289-A-G YY*
28590278-A-G 26444131-A-G *
15510064-G-T 13398184-G-T V2997 YY*
28771116-G-C 26624969-G-C CTS12972 FGC52 *
7461424-C-G 7593383-C-G CTS1530 IR1_L *
18125759-GGAAAGAAA-G 16013879-GGAAAGAAA-G 13×GAAA*
23992762-A-C 21846615-A-C *
20028014-A-G 17916134-A-G BY248ZS2905 E465 P5_Prx *
7177189-A-G 7309148-A-G YY*
14750668-C-A 12638737-C-A V2573 YY*
9139392-GA-G 9301783-GA-G 10×A*
22256646-G-T 20094760-G-T DYZ19 *
8149348-G-A 8281307-G-A YY*
7474294-T-C 7606253-T-C ZS3822 IR1_L *
14317555-A-G 12196849-A-G YY*
24360964-A-G 22214817-A-G FGC200 *
7461449-C-G 7593408-C-G CTS1533 IR1_L *
14205302-A-C 12084596-A-C YY*
23134896-T-C 20973010-T-C PF6079 YSC0000237 YY*
22750583-A-C 20588697-A-C YY*
22796697-C-T 20634811-C-T CTS10834 YY*
22818334-T-C 20656448-T-C YY*
22889018-A-G 20727132-A-G YY*
23035132-A-G 20873246-A-G YY*
17676-T-C *
23124367-T-G 20962481-T-G CTS11468 FGC49 YY*
23379254-A-G 21217368-A-G CTS11948 FGC54 YY*
23984056-A-G 21837909-A-G Y*
23403749-A-G 21241863-A-G YY*
23452965-C-T 21291079-C-T YY*
23476936-T-G 21315050-T-G YY*
7548900-A-G 7680859-A-G V1194 YY*
23631629-A-C 21469743-A-C YY*
23811761-G-T 21649875-G-T Y*
15581983-G-A 13470103-G-A YY*
23845409-C-T 21683523-C-T Y*
23058442-G-T 20896556-G-T CTS11291 PF4615 YY*
14116584-A-T 11995878-A-T YSC0000166 YY*
22733758-G-C 20571872-G-C YY*
6931040-G-C 7062999-G-C CTS655 YY*
13838485-AGGAAT-A 11717779-AGGAAT-A 9×GGAAT*
16629782-C-T 14517902-C-T YY*
2803717-T-C 2935676-T-C FGC210 CTS196 V1079 YY*
2817429-G-C 2949388-G-C CTS216 YY*
6630931-G-A 6762890-G-A YY*
6753511-A-G 6885470-A-G YY*
6670461-G-T 6802420-G-T YY*
28531624-A-G 26385477-A-G Y113114 Y*
10060320-C-T 10222711-C-T *
7459474-A-G 7591433-A-G CTS1518 IR1_L *
6701239-A-G 6833198-A-G YY*
7549445-A-T 7681404-A-T V1195 YY*
7628900-A-G 7760859-A-G YY*
7714986-G-T 7846945-G-T YY*
7848043-G-C 7980002-G-C YSC0000279 YY*
10038192-A-G 10200583-A-G A702 Z8137 *
8257661-G-A 8389620-G-A YY*
8439542-A-G 8571501-A-G V1980 YY*
6868118-A-G 7000077-A-G YY*
13822833-T-G 11702127-T-G FGC36 E159 *
17793822-A-ATATCTATC 15681942-A-ATATCTATC 11×TATC*
13869816-GTGGAA-G 11749110-GTGGAA-G 10×TGGAA*
13807475-A-C 11686769-A-C FGC189 *
8194310-A-C 8326269-A-C V1699 YY*
8466149-T-TTGGCA 8598108-T-TTGGCA *
8498913-G-GT 8630872-G-GT *
13693812-T-C 11538136-T-C Z8151 KMS121 *
16371765-CAGT-C 14259885-CAGT-C *
17392632-AT-A 15280752-AT-A 8×T*
8411202-G-A 8543161-G-A YY*
6912992-G-T 7044951-G-T CTS623 FGC37 YY*
18894227-TA-T 16782347-TA-T 8×A*
13657777-C-T 11502101-C-T L777 YSC0000248 *
13656660-A-G 11500984-A-G *
8413034-T-TTTCTGTTCTG 8544993-T-TTTCTGTTCTG 7×TTCTG*
17881230-C-G 15769350-C-G YY*
18720028-T-C 16608148-T-C YY*
8416058-A-C 8548017-A-C YY*
13455810-GTTCCA-G 11300134-GTTCCA-G 10×TTCCA*
22739367-C-T 20577481-C-T YY*
22687547-T-A 20525661-T-A CTS10663 YY*
8334875-G-A 8466834-G-A YY*
18109555-A-C 15997675-A-C YY*
17844018-C-T 15732138-C-T YY*
17986687-A-C 15874807-A-C YSC0000269 Y*
18017528-T-G 15905648-T-G FGC197 SK2005 Y*
18026855-A-G 15914975-A-G Y*
18047475-C-A 15935595-C-A YY*
18066156-T-C 15954276-T-C YY*
18095336-C-A 15983456-C-A CTS8591 FGC64 YY*
18117193-T-C 16005313-T-C YY*
17716251-T-C 15604371-T-C YY*
7766712-C-T 7898671-C-T YSC0000072 YY*
7762947-C-T 7894906-C-T YY*
18137831-C-T 16025951-C-T CTS8665 FGC464 YY*
16183412-A-C 14071532-A-C Y*
18167403-T-C 16055523-T-C YY*
18180446-A-C 16068566-A-C YY*
18248698-G-A 16136818-G-A Y*
18394634-C-T 16282754-C-T P6_Gap *
17693210-A-G 15581330-A-G PF4569 CTS7832 YY*
17594966-G-C 15483086-G-C CTS7659 FGC50 YY*
13470565-C-T 11314889-C-T *
7771131-A-G 7903090-A-G YY*
16615413-T-G 14503533-T-G YY*
16491135-T-C 14379255-T-C CTS5815 PF6044 Y*
16376495-C-A 14264615-C-A CTS5577 FGC38 YY*
7854412-G-A 7986371-G-A V1478 YY*
16742224-G-A 14630344-G-A YY*
16751825-A-G 14639945-A-G YY*
16773870-G-A 14661990-G-A YY*
16856357-C-T 14744477-C-T YY*
16939406-C-A 14827526-C-A YY*
17589518-T-C 15477638-T-C CTS7650 FGC44 S1164 YY*
16944053-C-T 14832173-C-T YY*
17013730-A-G 14901850-A-G YSC0000194 YY*
17132580-T-C 15020700-T-C YY*
17281258-G-T 15169378-G-T E101 YY*
17285993-T-C 15174113-T-C YY*
17301401-A-G 15189521-A-G CTS7122 YY*
17400785-A-G 15288905-A-G YY*
17461478-C-T 15349598-C-T CTS7400 FGC33 YY*
18719565-C-T 16607685-C-T YY*
18865298-T-C 16753418-T-C YY*
22487215-A-G 20325329-A-G DYZ19 *
21784286-A-G 19622400-A-G YY*
21263029-A-G 19101143-A-G YY*
21312064-A-C 19150178-A-C YY*
21358553-A-G 19196667-A-G YY*
7960019-A-G 8091978-A-G YY*
15590342-T-G 13478462-T-G YY*
21410840-T-G 19248954-T-G YY*
21558298-T-G 19396412-T-G YY*
21801722-A-G 19639836-A-G YY*
21222868-G-C 19060982-G-C YY*
8050994-C-G 8182953-C-G YY*
21843090-G-C 19681204-G-C YY*
21917832-C-T 19755946-C-T YY*
21983827-T-C 19821941-T-C YY*
22157311-A-C 19995425-A-C YY*
22190371-G-A 20028485-G-A YY*
22464928-T-C 20303042-T-C FGC331 DYZ19 *
22486700-T-G 20324814-T-G Z8156 KMS453 DYZ19 *
7948701-T-G 8080660-T-G V1532 YY*
21219443-G-A 19057557-G-A YY*
18907236-C-A 16795356-C-A YY*
19504659-A-T 17392779-A-T V4199 YY*
18914441-T-C 16802561-T-C YY*
19045552-T-C 16933672-T-C YSC0000207 YY*
19054889-T-C 16943009-T-C V3721 YY*
19179540-A-G 17067660-A-G V3866 Y*
19179606-C-A 17067726-C-A V3867 Y*
19291359-C-T 17179479-C-T V3993 YY*
19422961-C-CTCT 17311081-C-CTCT *
7671535-T-C 7803494-T-C V1356 YY*
7647357-A-G 7779316-A-G YY*
7900883-A-C 8032842-A-C FGC41 SK2062 Z8135 V1501 E117 YY*
20811307-A-G 18649421-A-G P4_Gap *
20828795-A-G 18666909-A-G P4_Gap *
15667208-C-G 13555328-C-G YSC0000179 FGC1168 SK2006 Y*
15594523-G-A 13482643-G-A V3064 YY*
20838224-G-A 18676338-G-A P4_Gap *
7891188-C-T 8023147-C-T YY*
21117888-C-T 18956002-C-T PF6141PF6141 YY*
21166358-G-T 19004472-G-T PF6142 YY*
8326618-T-C 8458577-T-C V1809 YY*
2686727-A-G 2818686-A-G YY*
8516929-A-G 8648888-A-G YY*
7180976-G-A 7312935-G-A PF4508 CTS1068 YY*
18705097-G-GATTT 16593217-G-GATTT 7×ATTT*
17534388-T-A 15422508-T-A S19861 Z6326 YY*
2902839-C-T 3034798-C-T Z43714 YY*
4874629-C-T 5006588-C-T *
16288097-T-A 14176217-T-A CTS5454CTS5454 YY*
7048870-G-A 7180829-G-A CTS852 PF4504 YY*
7065239-T-C 7197198-T-C YSC0000064 PF4505 YY*
7126936-G-T 7258895-G-T YSC0000066 PF4506 Y*
7190277-A-G 7322236-A-G FGC1579 F922 YY*
13674163-AGAATG-A 11518487-AGAATG-A 9×GAATG*
7292720-T-C 7424679-T-C PF4509 F4072 S34 YY*
7517252-G-T 7649211-G-T YSC0001321 PF4511 Y*
7694266-G-A 7826225-G-A YSC0000070 FGC1564 YY*
7759610-C-T 7891569-C-T PF4513 YY*
7922133-G-A 8054092-G-A Y1866 FGC1587 YY*
8222299-T-C 8354258-T-C L403 FGC1573 YY*
8308114-G-A 8440073-G-A JPF4515 YY*
8393499-G-A 8525458-G-A YSC0001296 PF4516 F1167 YY*
8393849-G-A 8525808-G-A PF4517 F1168 YY*
6523529-T-C 6655488-T-C Z11751 F14278 *
8667179-G-A 8799138-G-A YY*
8558969-A-T 8690928-A-T PF3525 P130 S22 YY*
23550924-C-A 21389038-C-A YY*
22471758-G-T 20309872-G-T DYZ19 *
22514081-T-G 20352195-T-G Y*
22808370-T-C 20646484-T-C CTS10859 YY*
14273103-G-T 12152397-G-T Y*
23342709-A-C 21180823-A-C YY*
23431541-G-A 21269655-G-A CTS12028 YY*
9084870-T-G 9247261-T-G YSC0000082 Y*
23489203-T-C 21327317-T-C YY*
23655112-A-G 21493226-A-G Y*
14466530-AATCT-A 12345803-AATCT-A 9×ATCT*
8619538-A-G 8751497-A-G PF303 br1 YY*
23993156-C-A 21847009-C-A *
24443836-T-G 22297689-T-G Y*
15909050-CCATT-C 13797170-CCATT-C 9×CATT*
8881927-G-GGT 9013886-G-GGT *
19332063-ATTTTG-A 17220183-ATTTTG-A 9×TTTTG*
22024891-CA-C 19863005-CA-C *
17281941-T-TGATA 15170061-T-TGATA 10×GATA*
13819959-TGAATGGAATGGAATG-T 11699253-TGAATGGAATGGAATG-T 14×GAATG*
8418927-G-C 8550886-G-C PF4518 F1181 S35 YY*
8590752-C-T 8722711-C-T PF3526 P127 YY*
8558505-C-T 8690464-C-T PF6021 V2252 YY*
16803249-A-C 14691369-A-C YSC0001306 PF4559 F2276 YY*
15581303-G-A 13469423-G-A YSC0001304 PF4546 F1973 YY*
15602183-G-A 13490303-G-A PF4547 CTS4349 YY*
15913787-A-C 13801907-A-C PF4549 CTS4937 YY*
16180103-A-G 14068223-A-G PF4550 CTS5280 Y*
16262942-G-A 14151062-G-A PF4551 F2114 YY*
16268345-C-G 14156465-C-G YSC0000785 PF4553 F2116 YY*
16401405-C-G 14289525-C-G PF4555 CTS5628 YY*
16475682-C-T 14363802-C-T YSC0001305 PF4558 F2174 YY*
16839810-C-T 14727930-C-T FGC1575 CTS6349 YY*
15472863-T-C 13360983-T-C YY*
16966024-T-C 14854144-T-C FGC1577 F2345 YY*
17012180-C-A 14900300-C-A YSC0000289 PF3546 L748 YY*
17040447-C-A 14928567-C-A FGC1584 F2366 YY*
17200869-G-A 15088989-G-A FGC1565 CTS6932 YY*
17367321-C-A 15255441-C-A JYSC0001286 PF4563 CTS7229 YY*
17510402-C-G 15398522-C-G YY*
17605948-A-C 15494068-A-C YSC0000197 PF4567 YY*
17637446-T-C 15525566-T-C PF4568 CTS7738 YY*
17660074-T-G 15548194-T-G YY*
15512225-AG-A 13400345-AG-A *
15278569-G-A 13166658-G-A PF4544 CTS3938 YY*
8679843-T-G 8811802-T-G YY*
14031334-T-A 11910628-T-A IJPF3535 P125 M429 YY*
8687145-G-T 8819104-G-T PF4520 F1381 YY*
8888300-G-A 9020259-G-A YSC0001300 FGC1583 F1450 Y*
8906357-C-T 9038316-C-T F1460 *
9815201-T-C 9977592-T-C FGC73077PF4521 YY*
9872484-T-C 10034875-T-C YSC0001301 F1632 YY*
9872486-C-T 10034877-C-T F1633 YY*
9872488-T-C 10034879-T-C YSC0001302 PF4523 F1634 YY*
13676377-G-T 11520701-G-T FGC1574 *
8722476-T-A 8854435-T-A YY*
14084606-G-T 11963900-G-T YSC0000165 PF4535 YY*
15237163-G-A 13125249-G-A PF4542 CTS3872 Y*
14144593-A-G 12023887-A-G PF3536 P129 YY*
14171812-T-G 12051106-T-G CTS2071 YY*
14237131-C-T 12116425-C-T S6 PF4537 L60 YY*
14264859-G-A 12144153-G-A YSC0001303 S4968 F1744 YY*
14330570-A-T 12209864-A-T YY*
13805396-TGAATG-T 11684690-TGAATG-T 11×GAATG****
14476551-T-A 12355820-T-A PF4538 CTS2769 YY*
14705645-G-A 12593711-G-A F1826 YY*
14850935-C-G 12739001-C-G PF4539 L134 YY*
8633545-C-T 8765504-C-T YY*
23979899-T-C 21833752-T-C Y*
22072340-G-C 19910454-G-C YY*
4352151-A-G 4484110-A-G A19936 *
8502236-A-G 8634195-A-G YY*
9646980-T-C 9809371-T-C YSC0000083 SA27 IR3_Prx *
16222561-T-C 14110681-T-C YSC0000186 YY*
16331558-A-G 14219678-A-G YY*
16497020-C-T 14385140-C-T YY*
9392948-T-C 9555339-T-C Y*
16535034-G-A 14423154-G-A CTS5884 YY*
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16290892-C-T 14179012-C-T ***
3967396-G-A 4099355-G-A ***
14073653-T-TTAAA 11952947-T-TTAAA 9×TAAA***
21329083-T-C 19167197-T-C YSC0001314 PF4592 F3176 ***
4853220-T-C 4985179-T-C ***
13476638-C-T 11320962-C-T ***
18084124-T-A 15972244-T-A PF4573 F2707 ***
17996247-A-G 15884367-A-G PF4572 P7_Gap ***
6527471-C-A 6659430-C-A ***
17136854-T-C 15024974-T-C PF4560 F2390 ***
16434671-C-T 14322791-C-T PF4557 CTS5691 ***
9852981-G-A 10015372-G-A A619 ***
15277466-G-A 13165555-G-A YSC0001275 PF4543 CTS3936 ***
13821157-TG-T 11700451-TG-T ***
6368879-G-T 6500838-G-T ***
18744476-C-T 16632596-C-T CTS9200 V3466 ***
21052567-T-TG 18890681-T-TG 8×G***
13447153-A-T 11291477-A-T ***
17621000-GT-G 15509120-GT-G 11×T***
8446218-A-C 8578177-A-C Y86887 ***
9857394-G-GA 10019785-G-GA 8×A***
13887941-A-G 11767235-A-G ***
22099636-A-T 19937750-A-T ***
13476607-A-T 11320931-A-T ***
18617596-T-C 16505716-T-C CTS9018 FGC188 ***
9852978-G-A 10015369-G-A BY22877 ***
8134704-A-T 8266663-A-T V1651 ***
7963031-G-T 8094990-G-T ***
5084471-GTTTC-G 5216430-GTTTC-G ***
18206455-A-G 16094575-A-G Y12587 Z28448 ***
23400066-C-A 21238180-C-A ***
13484535-C-A 11328859-C-A ***
10754934-CTCCATTCCAT-C ***
56830817-C-G ***
6024058-A-AT 6156017-A-AT 14×T***
13489482-C-G 11333806-C-G ***
56871631-AAT-A 10×AT***
2669118-A-G 2801077-A-G BY152288 ***
6773354-C-A 6905313-C-A ***
22164547-CAA-C,CA 20002661-CAA-C,CA 19×A***
10660117-T-TTTCCA ***
13257524-C-A 11101848-C-A ***
9839535-G-A 10001926-G-A ***
13846815-G-A 11726109-G-A FT89176 ***
13526316-C-A 11370640-C-A ***
56833175-CCACTC-C,CCATTT ***
18853070-C-G 16741190-C-G Y102871 ***
16309570-TC-T 14197690-TC-T ***
13460981-C-G 11305305-C-G ***
13482594-C-T 11326918-C-T ***
28589266-C-A 26443119-C-A ***
11015169-ATATCC-A,ATATTC ***
7925833-GT-G,GTT 8057792-GT-G,GTT 11×T***
13257505-G-T 11101829-G-T ***
13458748-T-G 11303072-T-G ***
21895593-A-T 19733707-A-T ***
6534759-C-A 6666718-C-A ***
18685473-C-A 16573593-C-A ***
19558743-G-A 17446863-G-A Y105121 ***
18067456-AAAGAAAGG-A 15955576-AAAGAAAGG-A ***
17799012-C-A 15687132-C-A ***
14825721-T-. 12713788-G-T ***
11026972-T-C ***
15558245-C-A 13446365-C-A Y94127 ***
15482716-C-G 13370836-C-G Y93889 ***
15439097-A-G 13327217-A-G Y93803 ***
13453189-C-T 11297513-C-T ***
56850805-G-A ***
14245051-C-A 12124345-C-A ***
13208770-GGAAGAAGAAGAAGAA-G,GGAAGAAGAAGAA 22×GAA***
16386361-AT-A 14274481-AT-A ***
19172815-T-A 17060935-T-A BY126963 ***
13469488-A-T 11313812-A-T ***
6944970-A-G 7076929-A-G FT71808 ***
10986811-C-A ***
14858425-T-A 12746491-T-A Y12613 Z28470 ***
16564350-TGATA-T,TGATAGATA 14452470-TGATA-T,TGATAGATA 11×GATA***
14315428-A-G 12194722-A-G ***
22113089-A-G 19951203-A-G ***
23475272-TG-G,T 21313386-TG-G,T ***
7148035-C-A 7279994-C-A ***
5387430-CAAA-C 5519389-CAAA-C 18×A***
13476631-G-C 11320955-G-C ***
24890224-ATT-A 22744077-ATT-A g1 13×T***
3815168-G-T 3947127-G-T ***
15821511-C-A 13709631-C-A ***
17514236-C-A 15402356-C-A ***
5225292-G-GTA 5357251-G-GTA 12×TA***
17500771-G-T 15388891-G-T ***
10949473-T-C ***
13460997-G-C 11305321-G-C ***
10987853-C-G ***
5412097-A-G 5544056-A-G ***
13812665-C-CGGAATGGAAT 11691959-C-CGGAATGGAAT 6×GGAAT***
21923739-A-T 19761853-A-T FGC1599 S23720 Z7822 ***
9173558-C-A 9335949-C-A FGC45051 ***
21797070-A-G 19635184-A-G Z29422 S23560 ***
6444971-C-T 6576930-C-T ***
6129336-T-A 6261295-T-A PF4501 ***
21852628-C-A 19690742-C-A ***
21929622-A-C 19767736-A-C Y107923 ***
13453123-TCATTCCATTC-T 11297447-TCATTCCATTC-T 14×CATTC***
21477779-AAG-A 19315893-AAG-A ***
22319648-T-G 20157762-T-G BY1986 DYZ19 ***
28542858-T-A 26396711-T-A PF4992 ***
23476053-C-T 21314167-C-T ***
22241004-A-T 20079118-A-T DYZ19 ***
22024569-G-A 19862683-G-A PF4597 ***
19007619-C-CATAT 16895739-C-CATAT 10×AT***
13455089-C-G 11299413-C-G ***
22437617-G-A 20275731-G-A BY218401 DYZ19 ***
22439133-T-A 20277247-T-A BY218641 DYZ19 ***
22483678-G-T 20321792-G-T BY224509 DYZ19 ***
18952077-G-A 16840197-G-A CTS9538 PF4919 ***
18950820-C-A 16838940-C-A CTS9533 PF4582 ***
22633211-C-T 20471325-C-T Y109340 ***
17631010-C-A 15519130-C-A CTS7725 PF4973 ***
16679590-AT-A 14567710-AT-A ***
23054317-C-A 20892431-C-A ***
16294038-CATTTT-C 14182158-CATTTT-C ***
15055079-A-T 12943170-A-T Y1885 FGC1581 CTS3597 ***
14969634-T-G 12857709-T-G PF4908 PAGES00028 M172 Page28 ***
14628068-T-C 12516136-T-C PF4962 F1810 ***
13453688-C-T 11298012-C-T ***
13694920-C-A 11539244-C-A BY26273 ***
56850975-G-T ***
58978446-C-G 56832299-C-G ***
7623459-T-A 7755418-T-A ***
2810388-TTG-T,TT 2942347-TTG-T,TT ***
2813000-C-A 2944959-C-A ***
14315406-G-T 12194700-G-T BY94770 ***
8144769-CA-C 8276728-CA-C 9×A***
58978432-C-G 56832285-C-G ***
24116274-C-T 21970127-C-T P3_b1 ***
22507842-G-T 20345956-G-T DYZ19 ***
20066675-C-T 17954795-C-T P5_Dst ***
9031416-ATT-A,AT 9193807-ATT-A,AT 11×T***
28787980-AT-A 26641833-AT-A ***
13459498-CCCATT-C 11303822-CCCATT-C ***
13676648-GTGGAATGGAATGGAA-G 11520972-GTGGAATGGAATGGAA-G 11×TGGAA***
28809633-C-T 26663486-C-T BY12618 ***
15593179-C-T 13481299-C-T ***
15558499-T-TAGACAGACAGAC 13446619-T-TAGACAGACAGAC 5×AGAC***
28787976-T-A 26641829-T-A ***
13463293-C-T 11307617-C-T ***
9980314-T-A 10142705-T-A ***
22845109-T-TA 20683223-T-TA ***
13449554-C-T 11293878-C-T ***
13476625-C-A 11320949-C-A ***
19513578-ATTTTT-A 17401698-ATTTTT-A 20×T***
13664677-C-A 11509001-C-A ***
13142948-G-GCATTCCATTC 10632434-G-GCATTCCATTC 11×CATTC***
22441014-A-T 20279128-A-T BY41097 DYZ19 ***
22436768-G-C 20274882-G-C BY26518 DYZ19 ***
19138271-CAT-C 17026391-CAT-C ***
7197570-ATTTTT-A,ATT 7329529-ATTTTT-A,ATT 19×T***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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