Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > DF21/S192 > FGC3213 > ZZ1 > S3058 > Z30228 > 16086483-C-T

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
635849
BigY2
635849
6111653-G-A 6243612-G-A ***A*
6308049-C-T 6440008-C-T IR3_Dst ***A*
18320463-G-A 16208583-G-A P6_Prx ***A*
19841917-G-A 17730037-G-A P5_Prx ***A*
22304383-C-A 20142497-C-A DYZ19 ***A*
22304382-C-A 20142496-C-A DYZ19 ***A*
22291173-C-A 20129287-C-A DYZ19 ***A*
13687090-A-G 11531414-A-G A*
20722846-G-A 18560960-G-A P4_Prx ***A*
22419967-T-C 20258081-T-C DYZ19 ++
8079874-G-A 8211833-G-A Y85786 YY++
6811497-C-T 6943456-C-T Y82601 YY++
7684792-T-G 7816751-T-G Y84670 YY++
9650188-C-T 9812579-C-T Y89124 IR3_Prx ++
8198928-A-G 8330887-A-G Y86070 YY++
8744300-C-G 8876259-C-G YY++
9845261-A-G 10007652-A-G Y89338 YY++
13471202-C-A 11315526-C-A ***+
13471555-G-C 11315879-G-C ++
13472960-G-C 11317284-G-C ***+
13650833-C-A 11495157-C-A ++
14198079-T-C 12077373-T-C Y90584 YY++
16811255-C-A 14699375-C-A Y97379 YY++
18119280-T-G 16007400-T-G Y101378 YY++
17773334-C-T 15661454-C-T Y100180 YY++
17815442-G-C 15703562-G-C Y100315 YY++
22906041-T-C 20744155-T-C Y110080 YY++
22514090-T-C 20352204-T-C Y108905 Y++
22485328-G-A 20323442-G-A DYZ19 +**
22440816-C-T 20278930-C-T BY24464 DYZ19 ++
22216218-G-C 20054332-G-C Y108740 Y+
13812331-T-A 11691625-T-A +
21191037-T-C 19029151-T-C Y105666 YY++
21148694-G-A 18986808-G-A Y12529 YY++
21621191-G-A 19459305-G-A PAGES00018 Page18 YY++
14469955-A-C 12349224-A-C FGC36895A8253 YY++
16039882-G-A 13928002-G-A Y95375 YY++
5842278-G-GA 5974237-G-GA 10×A+
16791397-A-G 14679517-A-G Y97305 YY++
22275410-C-G 20113524-C-G DYZ19 ****
22340083-G-A 20178197-G-A DYZ19 ****
16828442-T-TGTC 14716562-T-TGTC ****
28807617-T-G 26661470-T-G ****
22299496-G-C 20137610-G-C BY3437ZS3601 DYZ19 ****
18209083-CAGGT-C 16097203-CAGGT-C 6×AGGT****
3718094-TAA-T,TAAA 3850053-TAA-T,TAAA 10×A****
10950901-C-A **
10868901-T-G **
10972351-C-T **
10836474-C-CTGTCT **
10692672-C-A **
10687309-A-T **
10685811-C-CTACTG **
10851762-A-C **
10852593-A-C **
10876565-C-A **
10950894-TC-T **
10972339-C-A **
10835015-C-G **
10888064-C-A **
10893443-C-A **
10901878-A-G **
10911188-C-A **
10924493-A-C **
10949048-C-G **
10876683-C-A **
10774761-C-A **
10823659-A-T **
10763737-A-C **
10972379-CACTCT-C **
10776464-T-A **
10773642-TTCTGATCCACTCC-T **
10771907-A-C **
10771854-C-A **
10764304-T-C **
10763787-A-C **
10778020-G-T **
10761712-G-T **
10823239-C-A **
10757112-A-C **
10787535-A-ACCTAT **
10798342-A-C **
10809199-A-C **
10757096-A-C **
10753521-T-G **
10814176-T-A **
10753516-T-C **
10749177-C-A **
10749142-C-A **
28579946-C-T 26433799-C-T PF6824 **
10972400-A-C **
11672077-T-C **
13558982-A-G 11403306-A-G **
13577822-G-T 11422146-G-T **
13643817-T-G 11488141-T-G **
13697189-G-T 11541513-G-T **
11649672-C-T **
11653325-T-A **
11667185-G-A **
11671953-G-A **
11675595-T-G **
13490595-C-A 11334919-C-A **
11677681-T-A **
13922649-T-C 11801943-T-C **
13927253-A-G 11806547-A-G **
13933105-C-A 11812399-C-A **
13945506-T-C 11824800-T-C **
13946783-T-A 11826077-T-A **
13961632-A-C 11840926-A-C **
13963812-T-C 11843106-T-C **
13996557-A-G 11875851-A-G **
13527863-C-A 11372187-C-A **
13486565-G-T 11330889-G-T **
10972402-T-C **
11026992-T-C **
10993093-C-T **
11003954-C-A **
11013978-A-C **
11017453-C-G **
11018474-C-A **
11019599-T-A **
11026819-A-C **
11026922-T-G **
11031304-T-G **
13478168-G-A 11322492-G-A **
11031436-C-A **
13206416-G-T 11050740-G-T **
13229626-T-G 11073950-T-G **
13278587-C-A 11122911-C-A **
13313890-T-C 11158214-T-C **
10677006-C-A **
13324703-C-A 11169027-C-A **
13434131-C-A 11278455-C-A **
13466478-A-G 11310802-A-G **
10683068-C-A **
8970646-G-A 9133037-G-A **
10668189-C-A **
6463495-T-A 6595454-T-A **
5996427-G-A 6128386-G-A **
6040887-T-G 6172846-T-G **
6063107-C-T 6195066-C-T **
6119863-C-A 6251822-C-A **
6242392-C-A 6374351-C-A IR3_Dst **
6277541-G-T 6409500-G-T IR3_Dst **
6387315-G-C 6519274-G-C **
6441755-C-A 6573714-C-A **
6475365-A-C 6607324-A-C **
5885125-A-T 6017084-A-T **
6516803-A-C 6648762-A-C **
6580472-C-T 6712431-C-T **
6599707-C-A 6731666-C-A **
6751455-A-C 6883414-A-C **
6882358-A-G 7014317-A-G **
7009175-C-T 7141134-C-T **
7012805-C-A 7144764-C-A **
7150731-G-A 7282690-G-A **
7163037-C-A 7294996-C-A **
5911164-C-T 6043123-C-T **
5669251-C-A 5801210-C-A **
7188453-C-T 7320412-C-T **
4901524-T-G 5033483-T-G **
4448537-G-T 4580496-G-T **
4499447-C-A 4631406-C-A **
4502804-A-G 4634763-A-G **
4520305-C-A 4652264-C-A **
4538893-C-A 4670852-C-A **
4613195-C-G 4745154-C-G **
4731130-T-G 4863089-T-G **
4901511-T-G 5033470-T-G **
4901517-A-G 5033476-A-G **
4903058-C-A 5035017-C-A **
5621628-T-C 5753587-T-C **
4976774-C-G 5108733-C-G **
4995970-C-T 5127929-C-T **
5040349-C-A 5172308-C-A **
5211955-T-C 5343914-T-C **
5309582-C-T 5441541-C-T **
5336829-G-C 5468788-G-C **
5355600-G-T 5487559-G-T **
5364790-AC-A 5496749-AC-A **
5411407-G-A 5543366-G-A **
7185436-G-A 7317395-G-A **
7211269-A-C 7343228-A-C **
10631415-T-C **
9750118-T-A 9912509-T-A **
9047541-T-C 9209932-T-C **
9077209-C-A 9239600-C-A **
9116871-G-T 9279262-G-T **
9205297-A-G 9367688-A-G **
9499829-G-T 9662220-G-T **
9509668-C-G 9672059-C-G **
9509703-G-A 9672094-G-A **
9749994-G-T 9912385-G-T **
9750119-AG-A 9912510-AG-A **
13999203-T-A 11878497-T-A **
9832646-T-C 9995037-T-C **
9917856-C-A 10080247-C-A **
9942218-G-T 10104609-G-T **
9945613-G-T 10108004-G-T **
9991009-T-C 10153400-T-C **
9996454-A-G 10158845-A-G **
10026701-G-A 10189092-G-A **
10057073-C-A 10219464-C-A **
10627993-C-A **
8986941-C-A 9149332-C-A **
8852063-T-A 8984022-T-A **
7211309-T-A 7343268-T-A **
7925266-A-G 8057225-A-G **
7228915-C-T 7360874-C-T **
7279619-C-T 7411578-C-T **
7307700-G-T 7439659-G-T **
7318599-C-A 7450558-C-A **
7320505-G-T 7452464-G-T **
7320525-G-A 7452484-G-A **
7397503-C-A 7529462-C-A **
7424396-A-G 7556355-A-G **
7613981-C-A 7745940-C-A **
8077976-G-T 8209935-G-T **
8851902-G-T 8983861-G-T **
8095566-C-A 8227525-C-A **
8172026-G-A 8303985-G-A **
8403271-GCAA-T 8535230-GCAA-T **
8481998-G-T 8613957-G-T **
8658661-A-G 8790620-A-G **
8669838-T-C 8801797-T-C **
8733315-T-C 8865274-T-C **
8748517-C-A 8880476-C-A **
8776537-A-T 8908496-A-T **
13998229-C-A 11877523-C-A **
14639230-C-A 12527299-C-A **
14069062-G-T 11948356-G-T **
20993598-C-CAAA 18831712-C-CAAA P4_Dst 17×A**
20291028-A-AT 18129142-A-AT P5_Dst **
20334778-G-T 18172892-G-T P5_Dst **
20508400-T-C 18346514-T-C P5_Dst **
20625636-A-G 18463750-A-G P4_Prx **
20751934-T-G 18590048-T-G P4_Prx **
20802753-T-G 18640867-T-G P4_Gap **
20840803-A-C 18678917-A-C P4_Gap **
20932636-G-C 18770750-G-C P4_Dst **
21125671-G-T 18963785-G-T **
19829440-A-T 17717560-A-T P5_Prx **
21245040-A-T 19083154-A-T **
21269411-G-T 19107525-G-T **
21320428-C-A 19158542-C-A **
21334677-G-C 19172791-G-C **
21371050-T-G 19209164-T-G **
21474647-G-T 19312761-G-T **
21551509-G-T 19389623-G-T **
21551533-T-C 19389647-T-C **
21672183-AT-A 19510297-AT-A **
20025517-A-G 17913637-A-G P5_Prx **
19733311-C-T 17621431-C-T P5_Prx **
21737826-C-A 19575940-C-A **
19079253-T-A 16967373-T-A **
18742390-G-C 16630510-G-C **
18816847-C-T 16704967-C-T **
18915072-A-C 16803192-A-C **
18930499-G-T 16818619-G-T **
18975255-C-A 16863375-C-A **
18982580-A-AG 16870700-A-AG **
19040722-T-A 16928842-T-A **
19053110-A-T 16941230-A-T **
19079254-AG-A 16967374-AG-A **
19600395-G-GT 17488515-G-GT P5_Prx 16×GT**
19206716-G-T 17094836-G-T **
19271988-CA-C 17160108-CA-C **
19286382-T-G 17174502-T-G **
19310348-A-T 17198468-A-T **
19356860-G-A 17244980-G-A **
19403997-C-G 17292117-C-G **
19415853-C-A 17303973-C-A **
19423760-G-C 17311880-G-C **
19597233-T-A 17485353-T-A P5_Prx **
21697341-C-A 19535455-C-A **
21819190-T-G 19657304-T-G **
18687636-G-T 16575756-G-T **
28594311-A-G 26448164-A-G **
26400427-G-T 24254280-G-T P1_Y1 **
27270101-G-T 25123954-G-T P1_g3 **
27341527-G-T 25195380-G-T P1_g3 **
27521791-C-A 25375644-C-A P1_Y2 **
27829093-C-T 25682946-C-T P1_Y2 **
28033144-A-G 25886997-A-G P1_Y2 **
28506329-C-A 26360182-C-A **
28519774-C-A 26373627-C-A **
28609180-G-T 26463033-G-T **
24929374-C-A 22783227-C-A g1 **
28648547-G-C 26502400-G-C **
28704030-T-A 26557883-T-A **
28714199-A-C 26568052-A-C **
28742531-C-T 26596384-C-T **
28768799-C-A 26622652-C-A **
28804022-T-A 26657875-T-A **
56838490-G-T **
56844185-G-C **
56845258-T-G **
25521028-T-G 23374881-T-G P1_gr1 **
24667954-G-T 22521807-G-T P3_b2 **
22012209-C-A 19850323-C-A **
22991141-C-A 20829255-C-A **
22085621-T-C 19923735-T-C **
22164507-C-T 20002621-C-T **
22214660-G-T 20052774-G-T **
22485796-C-A 20323910-C-A DYZ19 **
22592032-C-A 20430146-C-A **
22593532-T-G 20431646-T-G **
22666061-A-C 20504175-A-C **
22783129-C-A 20621243-C-A **
22800894-C-A 20639008-C-A **
22995986-C-A 20834100-C-A **
24491648-G-T 22345501-G-T **
23078972-T-G 20917086-T-G **
23136928-A-G 20975042-A-G **
23262617-A-T 21100731-A-T **
23285297-G-T 21123411-G-T **
23579324-G-T 21417438-G-T **
23789520-C-A 21627634-C-A **
21755428-C-A **
24363623-C-A 22217476-C-A **
24406936-T-A 22260789-T-A **
18730966-C-G 16619086-C-G **
18645911-T-A 16534031-T-A **
14086209-G-C 11965503-G-C **
15557964-C-A 13446084-C-A **
14831989-A-C 12720056-A-C **
14933764-T-C 12821829-T-C **
15232163-G-T 13120249-G-T **
15259307-T-A 13147391-T-A **
15400029-C-A 13288149-C-A **
15429548-A-C 13317668-A-C **
15429549-A-C 13317669-A-C **
15497433-T-C 13385553-T-C **
15565444-T-C 13453564-T-C **
14769193-C-A 12657262-C-A **
15622466-C-T 13510586-C-T **
15622495-G-C 13510615-G-C **
15685923-G-T 13574043-G-T **
15700989-T-C 13589109-T-C **
15740846-C-A 13628966-C-A **
15770271-T-C 13658391-T-C **
15770299-T-A 13658419-T-A **
15926921-C-A 13815041-C-A **
15928530-C-T 13816650-C-T **
14796374-T-C 12684445-T-C **
14716752-G-A 12604820-G-A **
15958635-C-A 13846755-C-A **
14280866-TGAACCAG-T 12160160-TGAACCAG-T **
14086216-G-C 11965510-G-C **
14100980-A-C 11980274-A-C **
14108559-C-A 11987853-C-A **
14152287-T-C 12031581-T-C **
14219742-G-T 12099036-G-T **
14229836-A-C 12109130-A-C **
14241208-C-A 12120502-C-A **
14251725-G-T 12131019-G-T **
14270653-C-A 12149947-C-A **
14474948-C-A 12354217-C-A **
4420539-C-A 4552498-C-A **
14493507-C-G 12381704-C-G **
14513227-T-G 12401432-T-G **
14531336-A-C 12419537-A-C **
14531359-T-C 12419560-T-C **
14557012-C-A 12445213-C-A **
14567958-G-A 12456158-G-A **
14568049-T-A 12456249-T-A **
14571219-A-G 12459419-A-G **
14581077-G-A 12469277-G-A **
15936661-C-A 13824781-C-A **
15986647-T-G 13874767-T-G **
18395848-G-C 16283968-G-C P6_Gap **
17774954-G-T 15663074-G-T **
17399698-G-T 15287818-G-T **
17402277-T-C 15290397-T-C **
17524101-C-A 15412221-C-A **
17562016-TA-T 15450136-TA-T **
17568411-A-C 15456531-A-C **
17633713-A-T 15521833-A-T **
17648559-A-C 15536679-A-C **
17648574-G-T 15536694-G-T **
17802117-G-A 15690237-G-A **
17136983-G-A 15025103-G-A **
17850013-T-G 15738133-T-G **
17964334-C-CA 15852454-C-CA 8×A**
18053412-C-A 15941532-C-A **
18085705-G-T 15973825-G-T **
18141862-C-A 16029982-C-A **
18173261-G-T 16061381-G-T **
18190615-G-A 16078735-G-A **
18212080-C-A 16100200-C-A **
18328691-A-G 16216811-A-G P6_Prx **
17158997-GA-G 15047117-GA-G **
17095616-A-C 14983736-A-C **
15995501-C-A 13883621-C-A **
16357209-G-T 14245329-G-T **
16033674-C-A 13921794-C-A **
16044873-A-G 13932993-A-G **
16044904-A-C 13933024-A-C **
16048200-T-A 13936320-T-A **
16090960-C-A 13979080-C-A **
16146487-G-GAAAGAAAA 14034607-G-GAAAGAAAA P8_Dst **
16199700-C-A 14087820-C-A **
16295840-T-C 14183960-T-C **
16320074-C-T 14208194-C-T **
16458287-TA-T 14346407-TA-T **
17061722-G-A 14949842-G-A **
16490703-T-G 14378823-T-G **
16522624-C-A 14410744-C-A **
16544574-A-G 14432694-A-G **
16575083-G-A 14463203-G-A **
16601579-C-G 14489699-C-G **
16601588-G-T 14489708-G-T **
16623555-G-T 14511675-G-T **
16628630-T-C 14516750-T-C **
16816119-G-T 14704239-G-T **
4444828-A-C 4576787-A-C **
3774125-C-A 3906084-C-A **
4420237-A-G 4552196-A-G **
18423903-GA-G 16312023-GA-G P6_Gap **
10972363-A-C **
6277654-T-TC 6409613-T-TC IR3_Dst **
8376293-AT-A 8508252-AT-A 8×T**
22698929-CTTT-C 20537043-CTTT-C 13×T**
13218965-T-A 11063289-T-A **
17480126-C-A 15368246-C-A **
5937281-TAC-T 6069240-TAC-T **
10847077-C-A **
21515858-GTC-G 19353972-GTC-G **
10686330-T-A **
56876096-C-A **
19486875-TG-T 17374995-TG-T **
19218243-C-A 17106363-C-A **
15420041-C-A 13308161-C-A **
22536979-G-A 20375093-G-A **
10958258-G-C **
4769296-C-A 4901255-C-A **
4138926-G-T 4270885-G-T **
26249047-T-A 24102900-T-A P1_Y1 **
13475599-G-T 11319923-G-T **
5185310-C-A 5317269-C-A **
7109493-C-A 7241452-C-A **
13558353-C-A 11402677-C-A **
15334464-C-A 13222582-C-A **
10868784-A-C **
10868785-T-G **
10868827-C-T **
10868836-T-A **
19745029-G-T 17633149-G-T P5_Prx **
4969245-C-A 5101204-C-A **
8481988-G-T 8613947-G-T **
10812519-A-C **
10945117-T-C **
10945119-C-T **
17552011-C-A 15440131-C-A **
23831280-AG-A 21669394-AG-A **
14888076-CTTT-C 12776142-CTTT-C 17×T**
10033159-C-A 10195550-C-A **
10799554-CCATTT-C **
18189300-C-A 16077420-C-A **
7102452-C-A 7234411-C-A **
5869581-C-A 6001540-C-A **
10784324-C-A **
4311203-C-A 4443162-C-A **
10974468-C-A **
28483631-C-A 26337484-C-A **
9610037-TG-T 9772428-TG-T IR3_Prx **
16424460-G-T 14312580-G-T **
16745241-C-A 14633361-C-A **
16713068-C-A 14601188-C-A **
28779734-C-A 26633587-C-A **
7868064-C-T 8000023-C-T **
4240769-C-A 4372728-C-A **
28734318-C-A 26588171-C-A **
14324634-C-A 12203928-C-A **
18753068-G-T 16641188-G-T **
23465797-G-T 21303911-G-T **
2824430-C-A 2956389-C-A **
19293763-T-A 17181883-T-A **
28674797-C-A 26528650-C-A **
26248123-T-C 24101976-T-C P1_Y1 **
15734401-C-A 13622521-C-A **
10050158-C-A 10212549-C-A **
21839981-A-AT 19678095-A-AT **
23838769-C-A 21676883-C-A **
2810387-TTTG-T 2942346-TTTG-T **
18959293-T-G 16847413-T-G **
15334990-C-A 13223108-C-A **
10673621-C-A **
10875792-A-T **
7100997-C-A 7232956-C-A **
19732412-C-CAA 17620532-C-CAA P5_Prx **
10778789-C-A **
10024351-C-A 10186742-C-A **
14933623-C-A 12821688-C-A **
10868893-C-T **
10893868-C-T **
6427643-C-A 6559602-C-A **
18630666-CTTTT-C 16518786-CTTTT-C 20×T**
16092927-T-C 13981047-T-C **
9997936-GT-G 10160327-GT-G **
17527354-G-GTATA 15415474-G-GTATA 10×TA**
10945110-C-CTAGTT **
7917092-C-A 8049051-C-A **
5073677-AAT-A 5205636-AAT-A **
16952824-C-A 14840944-C-A **
28782236-C-A 26636089-C-A **
25396938-A-C 23250791-A-C P2_r2 **
7142843-C-A 7274802-C-A **
9832603-GC-G 9994994-GC-G **
56834623-C-A **
10821956-C-T **
28485818-C-A 26339671-C-A **
7202118-C-A 7334077-C-A **
18361466-T-A 16249586-T-A P6_Prx **
25396896-T-C 23250749-T-C P2_r2 **
10662266-A-C **
10809330-T-C **
14196290-C-A 12075584-C-A **
10846814-G-C **
22078311-C-A 19916425-C-A **
18173269-C-A 16061389-C-A **
17030673-C-A 14918793-C-A **
13962072-A-T 11841366-A-T **
25396922-A-G 23250775-A-G P2_r2 **
22365578-G-A 20203692-G-A DYZ19 **
7115506-C-A 7247465-C-A **
7237230-C-T 7369189-C-T **
19597202-TTTATTA-T 17485322-TTTATTA-T P5_Prx 12×TTA**
6147446-AT-A 6279405-AT-A IR3_Dst 19×T**
22520788-CAAAA-C 20358902-CAAAA-C 23×A**
13326060-TA-T 11170384-TA-T 14×A**
16601556-C-G 14489676-C-G **
26170451-CAGAAGA-C 24024304-CAGAAGA-C P1_Y1 23×AGA**
6347686-AAAAGAAAGAAAG-A 6479645-AAAAGAAAGAAAG-A 14×AAAG**
3252454-T-G 3384413-T-G **
14511437-C-A 12399642-C-A **
22298399-T-A 20136513-T-A DYZ19 *****
16029078-C-A 13917198-C-A **
59015739-T-A 56869592-T-A **
22147864-C-T 19985978-C-T 12×T**
21084419-G-A 18922533-G-A 9×TA**
13317353-T-A 11161677-T-A **
6822605-C-A 6954564-C-A ****
15334713-C-A 13222831-C-A ****
17095626-G-C 14983746-G-C ****
15081208-C-A 12969298-C-A **
23440676-AT-A 21278790-AT-A 9×T**
10877828-CA-C **
14143025-C-CAA 12022319-C-CAA 16×A**
10767640-C-G **
23419028-C-A 21257142-C-A **
10847088-C-T **
10868896-T-A **
10861508-C-A **
10958263-A-C **
10958278-A-C **
19187442-TA-T 17075562-TA-T **
16278484-C-A 14166604-C-A **
10767618-T-C **
3696707-G-T 3828666-G-T **
18794973-C-A 16683093-C-A **
10685809-T-C **
14513982-C-A 12402187-C-A **
5755950-G-T 5887909-G-T **
10877822-C-T **
10877823-T-G **
10877825-T-C **
10767628-T-C **
10782349-C-A **
6147479-G-T 6279438-G-T IR3_Dst **
3116565-C-A 3248524-C-A **
19563040-T-C 17451160-T-C **
18687730-G-A 16575850-G-A **
23603280-T-C 21441394-T-C **
11026007-C-T **
10945123-T-C **
17090870-GT-G 14978990-GT-G **
21839993-G-T 19678107-G-T **
22366314-C-A 20204428-C-A DYZ19 **
10983920-C-A **
10771900-C-CA **
3625897-C-A 3757856-C-A **
7031037-C-A 7162996-C-A **
6786890-G-T 6918849-G-T **
14926446-G-A 12814511-G-A **
18959288-T-A 16847408-T-A **
5212633-C-A 5344592-C-A **
10771860-T-A **
10771894-AT-A **
14609786-C-G 12497988-C-G **
56847278-C-A **
10770502-C-T **
24409414-G-T 22263267-G-T **
9927550-C-A 10089941-C-A **
3271483-C-A 3403442-C-A **
4107782-C-A 4239741-C-A **
16073169-C-A 13961289-C-A **
22783089-C-A 20621203-C-A **
8076759-C-A 8208718-C-A **
2774697-C-T 2906656-C-T **
17648567-T-A 15536687-T-A **
16601550-G-A 14489670-G-A **
10979635-C-A **
28515289-C-A 26369142-C-A **
23062388-C-A 20900502-C-A **
19379668-C-A 17267788-C-A **
7430603-C-A 7562562-C-A **
15113650-C-A 13001737-C-A **
18274912-G-T 16163032-G-T P6_Prx **
6520160-C-A 6652119-C-A **
11652088-C-A **
8720186-C-A 8852145-C-A **
6944936-T-A 7076895-T-A **
28605388-C-A 26459241-C-A **
11033212-G-T **
6124564-C-A 6256523-C-A **
2909065-T-TCA 3041024-T-TCA **
3330347-T-A 3462306-T-A **
10763800-T-C **
3990850-C-A 4122809-C-A **
28632765-A-C 26486618-A-C **
13593587-A-C 11437911-A-C **
17446801-C-CTT 15334921-C-CTT **
2900741-C-A 3032700-C-A **
11003989-C-A **
3790992-C-A 3922951-C-A **
11038220-C-A **
14385414-C-A 12264710-C-A **
18154323-C-A 16042443-C-A **
17549335-C-A 15437455-C-A **
10868879-A-G **
14566634-C-A 12454834-C-A **
17648565-A-G 15536685-A-G **
26376494-T-G 24230347-T-G P1_Y1 **
13315014-C-A 11159338-C-A **
3061191-C-A 3193150-C-A **
22811141-C-A 20649255-C-A **
16029077-G-A 13917197-G-A **
2979668-A-C 3111627-A-C **
3074866-A-C 3206825-A-C **
2680933-C-A 2812892-C-A **
2979641-T-G 3111600-T-G **
2979635-T-C 3111594-T-C **
2689673-G-T 2821632-G-T **
2693240-C-T 2825199-C-T **
2744775-A-T 2876734-A-T **
2790260-A-C 2922219-A-C **
22076221-C-A 19914335-C-A **
14609796-T-C 12497998-T-C **
28759661-C-A 26613514-C-A **
14627179-T-C 12515247-T-C **
10673656-C-A **
10756917-C-A **
5216549-C-A 5348508-C-A **
16062799-G-T 13950919-G-T **
8398962-G-T 8530921-G-T **
22023395-G-A 19861509-G-A **
28755710-C-A 26609563-C-A **
15898919-C-A 13787039-C-A **
9764192-C-A 9926583-C-A **
28610157-C-A 26464010-C-A **
10973435-T-C **
26376484-T-A 24230337-T-A P1_Y1 **
3261511-G-T 3393470-G-T **
28656166-C-A 26510019-C-A **
8852197-C-A 8984156-C-A **
8848191-C-A 8980150-C-A **
14463316-C-A 12342589-C-A **
2928457-C-T 3060416-C-T **
10868867-C-G **
17371132-C-A 15259252-C-A **
4063363-T-C 4195322-T-C **
23447411-C-A 21285525-C-A **
3045895-C-A 3177854-C-A **
17231471-T-C 15119591-T-C **
16786212-C-A 14674332-C-A **
4443519-C-A 4575478-C-A **
24729751-A-C 22583604-A-C P3_b2 **
3733745-G-T 3865704-G-T **
23096671-C-A 20934785-C-A **
3663797-G-T 3795756-G-T **
17997415-C-A 15885535-C-A P7_Gap **
14485274-C-A 12364543-C-A **
10792703-C-A **
10868848-CACTCT-C **
3494604-G-T 3626563-G-T **
7228958-C-A 7360917-C-A **
5650716-C-A 5782675-C-A **
9465228-C-A 9627619-C-A **
18972768-C-A 16860888-C-A **
2684617-C-A 2816576-C-A **
24363630-T-A 22217483-T-A **
11663382-C-A **
6881295-C-A 7013254-C-A **
10771839-A-T **
10771844-A-C **
10771871-G-T **
4192824-C-T 4324783-C-T **
7154820-C-A 7286779-C-A **
10034253-C-A 10196644-C-A **
4077714-T-G 4209673-T-G **
4175071-A-T 4307030-A-T **
10677792-C-G **
2901549-C-A 3033508-C-A **
4113040-G-T 4244999-G-T **
4083583-A-G 4215542-A-G **
15541650-G-T 13429770-G-T **
26248119-T-G 24101972-T-G P1_Y1 **
10685804-T-TATCAC **
56876101-C-A **
3625990-T-A 3757949-T-A **
22893372-T-TC 20731486-T-TC **
18849422-A-G 16737542-A-G **
13487127-C-A 11331451-C-A **
14219519-C-A 12098813-C-A **
15952014-C-A 13840134-C-A **
14273503-G-T 12152797-G-T **
10868859-T-A **
3346875-T-C 3478834-T-C **
19393171-C-A 17281291-C-A Y104598 **
10034129-C-A 10196520-C-A **
8077177-C-A 8209136-C-A **
16445728-C-A 14333848-C-A **
28720216-C-A 26574069-C-A **
3405486-A-G 3537445-A-G **
18022398-C-A 15910518-C-A **
8482011-C-A 8613970-C-A **
3405509-C-G 3537468-C-G **
10958266-T-C **
9940614-C-A 10103005-C-A **
14529176-C-A 12417377-C-A **
6690231-C-A 6822190-C-A **
10950483-A-T **
17718410-A-T 15606530-A-T **
15259302-C-A 13147386-C-A **
10958262-A-T **
3340600-C-A 3472559-C-A **
15406939-TAAAA-T 13295059-TAAAA-T 20×A**
19973337-CTT-C 17861457-CTT-C P5_Prx 8×T***
19720709-ATTT-A 17608829-ATTT-A P5_Prx 23×T***
23789415-A-G 21627529-A-G ***
22223581-G-T 20061695-G-T DYZ19 ***
25806928-A-C 23660781-A-C P1_b3 ***
22336651-G-C 20174765-G-C FGC21828 DYZ19 ***
26945851-T-C 24799704-T-C P1_r3 ***
22226595-C-G 20064709-C-G FGC21827 DYZ19 ***
27010476-G-A 24864329-G-A P1_r4 ***
24916047-C-G 22769900-C-G g1 ***
5011325-A-T 5143284-A-T ***
24929727-A-G 22783580-A-G g1 ***
22453452-G-C 20291566-G-C DYZ19 ***
24816036-T-C 22669889-T-C P3_b2 ***
24167616-C-T 22021469-C-T P3_b1 ***
24081630-T-C 21935483-T-C P3_b1 ***
24916744-A-G 22770597-A-G g1 ***
22456161-G-A 20294275-G-A DYZ19 ***
4874776-G-T 5006735-G-T ***
22537976-A-G 20376090-A-G ***
4929179-A-G 5061138-A-G ***
25052041-A-G 22905894-A-G g1 ***
25054031-A-G 22907884-A-G g1 ***
18345943-AATAC-A 16234063-AATAC-A P6_Prx 9×ATAC***
25241686-A-G 23095539-A-G P2_r1 ***
8020221-C-A 8152180-C-A 22×A***
22241286-C-G 20079400-C-G DYZ19 ***
8974600-C-T 9136991-C-T ***
2901432-C-A 3033391-C-A ***
14180865-A-G 12060159-A-G ***
56841340-C-A ***
15190034-A-T 13078120-A-T ***
15865569-TTTC-T 13753689-TTTC-T ***
10929654-GTCCAC-G ***
10781535-C-A ***
15203237-C-A 13091323-C-A ***
10821926-C-CCTCTCCACCT ***
10821942-C-T ***
13472205-G-T 11316529-G-T ***
23096772-A-G 20934886-A-G ***
10755028-G-T ***
16245328-C-A 14133448-C-A ***
10958288-C-G ***
10958319-CATTCCA-C ***
15980721-TAAA-T 13868841-TAAA-T 17×A***
10992962-ACCATTCCATTCCATTCCATT-A,ACCATT ***
18565230-C-A 16453350-C-A ***
10808619-T-C ***
17504817-C-A 15392937-C-A ***
22068521-C-A 19906635-C-A ***
11663296-G-A ***
8025155-CAA-C,CA 8157114-CAA-C,CA 14×A***
13294733-C-A 11139057-C-A ***
16379076-C-A 14267196-C-A ***
16290801-A-T 14178921-A-T ***
10754937-C-T ***
19375470-CA-C 17263590-CA-C ***
21462622-A-G 19300736-A-G ***
21267751-T-C 19105865-T-C ***
21253833-G-T 19091947-G-T ***
21164572-ACTGAATTCACT-A 19002686-ACTGAATTCACT-A ***
21104437-T-A 18942551-T-A 22×A***
10892524-A-T ***
10808593-C-A ***
13856708-AAATGG-A 11736002-AAATGG-A 5×AATGG***
6671835-T-A 6803794-T-A ***
21677606-C-A 19515720-C-A ***
56830310-TGCCATTCCAT-T,TGACTCCATTCCAC ***
10669654-A-ACCATT ***
15904166-AAAAC-A 13792286-AAAAC-A ***
10892533-C-A ***
18871919-T-C 16760039-T-C ***
21180780-C-A 19018894-C-A ***
18085715-G-T 15973835-G-T ***
8874970-CTTTTT-C,CTTTT 9006929-CTTTTT-C,CTTTT 17×T***
13478193-G-A 11322517-G-A ***
21146261-G-A 18984375-G-A ***
8843578-C-T 8975537-C-T ***
3012826-C-A 3144785-C-A ***
16060063-C-A 13948183-C-A ***
16988804-C-A 14876924-C-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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