Adams
FTDNA: B105711, BigY2: B105711Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA B105711 | BigY2 B105711 |
---|---|---|---|---|---|---|---|---|---|
19634078-T-C | 17522198-T-C | P5_Prx | *** | A* | |||||
22282295-G-A | 20120409-G-A | DYZ19 | *** | A* | |||||
22304920-C-T | 20143034-C-T | DYZ19 | *** | A* | |||||
13449803-C-T | 11294127-C-T | A* | |||||||
13655880-C-T | 11500204-C-T | BY38054 | + | + | |||||
18943334-G-GA | 16831454-G-GA | + | + | ||||||
18943336-CAG-C | 16831456-CAG-C | + | + | ||||||
6797775-A-G | 6929734-A-G | BY61371 | Y | Y | + | + | |||
7466906-A-G | 7598865-A-G | BY65402 | IR1_L | + | + | ||||
7745364-C-A | 7877323-C-A | BY67305 | Y | Y | + | + | |||
7878798-C-CT | 8010757-C-CT | + | + | ||||||
8841519-C-T | 8973478-C-T | BY76276 | Y | Y | + | + | |||
9385030-C-T | 9547421-C-T | BY79041 | Y | ** | + | ||||
13678692-T-A | 11523016-T-A | BY88124 | + | + | |||||
14556307-A-G | 12444508-A-G | BY96477 | Y | Y | + | + | |||
14804053-T-C | 12692124-T-C | BY97665 | Y | Y | + | + | |||
15338564-A-C | 13226682-A-C | Y18081 | Y | Y | + | + | |||
15348328-A-T | 13236447-A-T | BY101014 | Y | Y | + | + | |||
15707588-G-A | 13595708-G-A | BY103441 | Y | Y | + | + | |||
17719082-A-G | 15607202-A-G | BY116911 | Y | Y | + | + | |||
21041693-T-G | 18879807-T-G | BY130082 | Y | + | + | ||||
21694056-A-G | 19532170-A-G | BY134777 | Y | Y | + | + | |||
22466181-A-T | 20304295-A-T | BY221682 | DYZ19 | + | + | ||||
22558064-A-C | 20396178-A-C | BY138996 | Y | Y | + | + | |||
23432511-G-A | 21270625-G-A | VL18 | Y | Y | + | + | |||
23515365-G-A | 21353479-G-A | BY145901 | Y | Y | + | + | |||
24950963-G-A | 22804816-G-A | g1 | + | ||||||
27319180-A-T | 25173033-A-T | P1_g3 | + | ||||||
13651343-C-CGAATG | 11495667-C-CGAATG | 5×GAATG | *** | * | |||||
22230138-C-G | 20068252-C-G | DYZ19 | *** | * | |||||
22233656-C-T | 20071770-C-T | DYZ19 | *** | * | |||||
14515195-G-T | 12403400-G-T | PR1486 | ** | ** | |||||
14051645-C-A | 11930939-C-A | ** | |||||||
18354164-TAGAAAGAA-T | 16242284-TAGAAAGAA-T | P6_Prx | 13×AGAA | ** | |||||
9700805-G-A | 9863196-G-A | IR3_Prx | ** | ||||||
4521636-G-A | 4653595-G-A | ** | |||||||
13530113-G-A | 11374437-G-A | ** | |||||||
5937238-CTCTCTATA-C | 6069197-CTCTCTATA-C | ** | |||||||
7832157-G-T | 7964116-G-T | ** | |||||||
17199988-G-A | 15088108-G-A | CTS6928 | ** | ||||||
2806195-ATTTTT-A | 2938154-ATTTTT-A | 36×T | ** | ||||||
14196246-C-A | 12075540-C-A | ** | |||||||
27916459-C-A | 25770312-C-A | P1_Y2 | ** | ||||||
15410626-T-C | 13298746-T-C | ** | |||||||
13485686-C-A | 11330010-C-A | ** | |||||||
6768879-C-G | 6900838-C-G | ** | |||||||
23223291-G-C | 21061405-G-C | ** | |||||||
18581878-C-A | 16469998-C-A | BY211779 | ** | ||||||
7195246-C-A | 7327205-C-A | ** | |||||||
14584940-A-G | 12473140-A-G | FGC11774 | ** | ||||||
21068453-T-A | 18906567-T-A | ** | |||||||
24283305-T-A | 22137158-T-A | P3_t1 | ** | ||||||
18564947-C-A | 16453067-C-A | ** | |||||||
28774005-C-A | 26627858-C-A | ** | |||||||
18959211-T-C | 16847331-T-C | ** | |||||||
22882064-C-A | 20720178-C-A | ** | |||||||
7541433-T-C | 7673392-T-C | ** | |||||||
13472233-C-T | 11316557-C-T | ** | |||||||
7164201-C-A | 7296160-C-A | ** | |||||||
19732412-C-CT | 17620532-C-CT | P5_Prx | ** | ||||||
8073874-C-A | 8205833-C-A | ** | |||||||
2729648-C-T | 2861607-C-T | 25×T | ** | ||||||
16842090-C-A | 14730210-C-A | ** | |||||||
13323523-G-T | 11167847-G-T | ** | |||||||
25995121-GTA-G | 23848974-GTA-G | P1_Y1 | ** | ||||||
18959196-C-A | 16847316-C-A | ** | |||||||
15374419-G-T | 13262539-G-T | ** | |||||||
24052536-G-T | 21906389-G-T | P3_b1 | ** | ||||||
2790296-A-C | 2922255-A-C | ** | |||||||
13485689-C-T | 11330013-C-T | ** | |||||||
10870006-G-C | ** | ||||||||
4758696-C-A | 4890655-C-A | ** | |||||||
10841131-G-C | ** | ||||||||
7018053-G-T | 7150012-G-T | ** | |||||||
16437404-T-C | 14325524-T-C | ** | |||||||
19847672-C-T | 17735792-C-T | P5_Prx | ** | ||||||
2784531-C-A | 2916490-C-A | ** | |||||||
15971218-C-T | 13859338-C-T | ** | |||||||
3131052-C-A | 3263011-C-A | ** | |||||||
14515189-C-A | 12403394-C-A | ** | |||||||
19246766-C-A | 17134886-C-A | ** | |||||||
14423264-C-A | 12302539-C-A | ** | |||||||
56833196-T-TCTCC | ** | ||||||||
28483549-C-A | 26337402-C-A | ** | |||||||
15410632-TC-T | 13298752-TC-T | ** | |||||||
13944615-C-A | 11823909-C-A | ** | |||||||
9577147-C-A | 9739538-C-A | IR3_Prx | ** | ||||||
13990000-C-A | 11869294-C-A | ** | |||||||
18959212-C-T | 16847332-C-T | ** | |||||||
15449892-C-A | 13338012-C-A | 21×T | ** | ||||||
21747727-C-A | 19585841-C-A | Y32816 | ** | ||||||
15971222-G-T | 13859342-G-T | ** | |||||||
18908108-GTGTA-G | 16796228-GTGTA-G | ** | |||||||
15276879-C-A | 13164968-C-A | ** | |||||||
15127054-C-A | 13015141-C-A | ** | |||||||
3343165-C-A | 3475124-C-A | ** | |||||||
16062125-C-A | 13950245-C-A | ** | |||||||
11000435-T-C | ** | ||||||||
28483797-C-A | 26337650-C-A | ** | |||||||
14445069-C-A | 12324342-C-A | ** | |||||||
2786003-C-A | 2917962-C-A | ** | |||||||
18035709-G-T | 15923829-G-T | ** | |||||||
10751149-C-T | ** | ||||||||
10648029-A-T | ** | ||||||||
17370875-C-A | 15258995-C-A | ** | |||||||
10814365-C-A | ** | ||||||||
20840948-C-A | 18679062-C-A | P4_Gap | ** | ||||||
6916325-C-A | 7048284-C-A | ** | |||||||
15374435-G-A | 13262555-G-A | ** | |||||||
14806058-T-C | 12694129-T-C | ** | |||||||
21405832-CAAAA-C | 19243946-CAAAA-C | 15×A | ** | ||||||
14715542-G-T | 12603609-G-T | ** | |||||||
15866065-T-A | 13754185-T-A | ** | |||||||
11026019-A-T | ** | ||||||||
14570755-C-A | 12458955-C-A | ** | |||||||
11001634-C-A | ** | ||||||||
14867118-G-T | 12755188-G-T | ** | |||||||
22425717-G-T | 20263831-G-T | BY45208 | DYZ19 | ** | |||||
13487510-T-A | 11331834-T-A | ** | |||||||
14430431-C-A | 12309704-C-A | ** | |||||||
10887598-G-T | ** | ||||||||
28514515-C-A | 26368368-C-A | ** | |||||||
18266135-C-T | 16154255-C-T | ** | |||||||
18266136-A-G | 16154256-A-G | ** | |||||||
18266143-T-C | 16154263-T-C | ** | |||||||
6776245-C-A | 6908204-C-A | ** | |||||||
10988366-A-T | ** | ||||||||
10827043-C-A | ** | ||||||||
2833178-C-T | 2965137-C-T | 19×T | ** | ||||||
17199546-AT-A | 15087666-AT-A | 9×T | ** | ||||||
4371986-C-A | 4503945-C-A | ** | |||||||
22047836-C-A | 19885950-C-A | ** | |||||||
28544462-C-A | 26398315-C-A | ** | |||||||
10752255-G-T | FT411695 | ** | |||||||
2668961-C-A | 2800920-C-A | ** | |||||||
10955717-C-A | ** | ||||||||
7156973-C-A | 7288932-C-A | ** | |||||||
20510988-TTTTTTA-T | 18349102-TTTTTTA-T | P5_Dst | ** | ||||||
9986299-G-A | 10148690-G-A | FT426699 | ** | ||||||
17030877-A-G | 14918997-A-G | FGC4799 Y12505 | ** | ||||||
23807561-A-C | 21645675-A-C | ** | |||||||
13962091-A-C | 11841385-A-C | ** | |||||||
21556962-A-T | 19395076-A-T | ** | |||||||
7310621-T-G | 7442580-T-G | ** | |||||||
8666756-A-G | 8798715-A-G | ** | |||||||
14452688-G-T | 12331961-G-T | ** | |||||||
15971220-A-T | 13859340-A-T | ** | |||||||
4703613-C-A | 4835572-C-A | ** | |||||||
18564953-T-A | 16453073-T-A | ** | |||||||
18197905-C-A | 16086025-C-A | ** | |||||||
22843794-T-G | 20681908-T-G | ** | |||||||
27637074-T-C | 25490927-T-C | P1_Y2 | ** | ||||||
16598661-T-A | 14486781-T-A | ** | |||||||
19520845-T-A | 17408965-T-A | 21×A | ** | ||||||
9013247-G-A | 9175638-G-A | ** | |||||||
15995231-C-A | 13883351-C-A | ** | |||||||
17946947-A-T | 15835067-A-T | ** | |||||||
4970083-G-T | 5102042-G-T | ** | |||||||
21556954-A-G | 19395068-A-G | ** | |||||||
8568505-G-T | 8700464-G-T | ** | |||||||
7579888-T-A | 7711847-T-A | ** | |||||||
15252802-TCA-T | 13140888-TCA-T | ** | |||||||
19218121-C-A | 17106241-C-A | ** | |||||||
15374440-A-G | 13262560-A-G | ** | |||||||
22614838-C-A | 20452952-C-A | ** | |||||||
17187562-G-A | 15075682-G-A | ** | |||||||
23831429-G-A | 21669543-G-A | ** | |||||||
17991413-A-AG | 15879533-A-AG | P7_Prx | ** | ||||||
14076048-C-A | 11955342-C-A | ** | |||||||
4902477-G-T | 5034436-G-T | ** | |||||||
21556945-C-CTT | 19395059-C-CTT | ** | |||||||
9940217-C-A | 10102608-C-A | ** | |||||||
10678577-C-T | ** | ||||||||
21087108-C-T | 18925222-C-T | ** | |||||||
14454378-C-A | 12333651-C-A | ** | |||||||
56845556-G-T | ** | ||||||||
15921612-C-T | 13809732-C-T | ** | |||||||
5059685-A-T | 5191644-A-T | ** | |||||||
7141946-C-A | 7273905-C-A | ** | |||||||
23831291-C-T | 21669405-C-T | ** | |||||||
15606835-C-A | 13494955-C-A | ** | |||||||
18425252-C-T | 16313372-C-T | P6_Gap | ** | ||||||
21133392-C-CA | 18971506-C-CA | 8×A | ** | ||||||
13460420-G-C | 11304744-G-C | ** | |||||||
11025594-T-A | ** | ||||||||
16379276-C-A | 14267396-C-A | ** | |||||||
22166723-C-A | 20004837-C-A | ** | |||||||
22188745-C-A | 20026859-C-A | ** | |||||||
10793242-C-T | FT431435 | ** | |||||||
19737310-T-TA | 17625430-T-TA | P5_Prx | ** | ||||||
13255301-C-A | 11099625-C-A | ** | |||||||
24003213-C-A | 21857066-C-A | ** | |||||||
19111431-C-A | 16999551-C-A | ** | |||||||
10907774-T-C | ** | ||||||||
15392499-A-C | 13280619-A-C | ** | |||||||
9852763-C-A | 10015154-C-A | ** | |||||||
17224301-C-A | 15112421-C-A | ** | |||||||
10687342-C-A | ** | ||||||||
16823890-C-A | 14712010-C-A | ** | |||||||
13471975-G-T | 11316299-G-T | ** | |||||||
13485715-A-T | 11330039-A-T | ** | |||||||
10943696-C-A | ** | ||||||||
17497045-A-G | 15385165-A-G | ** | |||||||
10895763-T-G | ** | ||||||||
6776322-C-A | 6908281-C-A | ** | |||||||
22032604-C-A | 19870718-C-A | ** | |||||||
7621186-C-A | 7753145-C-A | ** | |||||||
16437405-C-T | 14325525-C-T | ** | |||||||
15530274-G-A | 13418394-G-A | ** | |||||||
28532042-C-A | 26385895-C-A | ** | |||||||
4256978-C-A | 4388937-C-A | ** | |||||||
28623355-C-A | 26477208-C-A | ** | |||||||
7142347-C-A | 7274306-C-A | ** | |||||||
19045010-TAAAA-T | 16933130-TAAAA-T | 16×A | ** | ||||||
10950883-C-T | ** | ||||||||
8085673-G-A | 8217632-G-A | ** | |||||||
15239131-C-A | 13127217-C-A | ** | |||||||
4003009-C-A | 4134968-C-A | ** | |||||||
11026072-C-T | ** | ||||||||
16681711-C-A | 14569831-C-A | ** | |||||||
10988365-T-C | ** | ||||||||
22433860-C-A | 20271974-C-A | DYZ19 | ** | ||||||
24472453-GA-G | 22326306-GA-G | ** | |||||||
5911882-C-A | 6043841-C-A | ** | |||||||
4928923-T-A | 5060882-T-A | ** | |||||||
7135228-C-A | 7267187-C-A | ** | |||||||
10667076-G-T | ** | ||||||||
7759091-C-A | 7891050-C-A | ** | |||||||
15662349-C-A | 13550469-C-A | ** | |||||||
24878863-G-T | 22732716-G-T | g1 | ** | ||||||
14985219-C-A | 12873287-C-A | ** | |||||||
22662407-C-A | 20500521-C-A | ** | |||||||
11025539-C-G | ** | ||||||||
11025555-T-ATTTAA | ** | ||||||||
27714817-G-T | 25568670-G-T | P1_Y2 | ** | ||||||
14184571-C-T | 12063865-C-T | ** | |||||||
17596479-C-A | 15484599-C-A | ** | |||||||
8085606-T-C | 8217565-T-C | ** | |||||||
3284554-C-A | 3416513-C-A | ** | |||||||
14067870-T-C | 11947164-T-C | ** | |||||||
6996599-C-A | 7128558-C-A | ** | |||||||
23804272-G-T | 21642386-G-T | ** | |||||||
18086907-C-A | 15975027-C-A | ** | |||||||
8085580-G-T | 8217539-G-T | ** | |||||||
8085581-A-G | 8217540-A-G | ** | |||||||
8085599-G-C | 8217558-G-C | ** | |||||||
8085618-C-A | 8217577-C-A | ** | |||||||
8085655-C-T | 8217614-C-T | ** | |||||||
10956821-C-A | ** | ||||||||
18849429-C-A | 16737549-C-A | ** | |||||||
10662237-C-A | ** | ||||||||
10988372-G-C | ** | ||||||||
13856000-A-G | 11735294-A-G | ** | |||||||
10971149-C-A | ** | ||||||||
10678575-C-A | ** | ||||||||
15761771-G-T | 13649891-G-T | ** | |||||||
14743523-C-A | 12631592-C-A | ** | |||||||
13603081-C-A | 11447405-C-A | ** | |||||||
6792628-CAAAAAAA-C | 6924587-CAAAAAAA-C | 18×A | ** | ||||||
19232963-C-A | 17121083-C-A | ** | |||||||
56861818-A-AAC | ** | ||||||||
4968849-C-A | 5100808-C-A | ** | |||||||
10907768-T-A | ** | ||||||||
16739373-C-A | 14627493-C-A | ** | |||||||
8720186-C-A | 8852145-C-A | ** | |||||||
15940079-G-A | 13828199-G-A | ** | |||||||
15940083-G-A | 13828203-G-A | ** | |||||||
17363331-A-G | 15251451-A-G | ** | |||||||
15789202-C-A | 13677322-C-A | ** | |||||||
23096686-C-A | 20934800-C-A | ** | |||||||
7186324-C-A | 7318283-C-A | ** | |||||||
9849763-C-A | 10012154-C-A | ** | |||||||
10953931-C-A | ** | ||||||||
8085679-G-A | 8217638-G-A | ** | |||||||
8085684-AT-A | 8217643-AT-A | ** | |||||||
10751165-A-C | ** | ||||||||
13896326-C-A | 11775620-C-A | ** | |||||||
10839761-C-A | ** | ||||||||
14428077-C-A | 12307352-C-A | ** | |||||||
22173590-C-A | 20011704-C-A | ** | |||||||
18520587-G-T | 16408707-G-T | P6_Dst | ** | ||||||
13487687-T-C | 11332011-T-C | ** | |||||||
13487695-T-C | 11332019-T-C | ** | |||||||
23145284-C-A | 20983398-C-A | ** | |||||||
19429607-TA-T | 17317727-TA-T | 9×A | ** | ||||||
10754875-A-T | ** | ||||||||
13902215-C-A | 11781509-C-A | ** | |||||||
19168463-C-A | 17056583-C-A | ** | |||||||
18406886-C-A | 16295006-C-A | P6_Gap | ** | ||||||
17864071-G-T | 15752191-G-T | ** | |||||||
18855500-A-T | 16743620-A-T | ** | |||||||
19600394-T-TGG | 17488514-T-TGG | P5_Prx | ** | ||||||
16932084-C-A | 14820204-C-A | ** | |||||||
15916220-C-A | 13804340-C-A | ** | |||||||
17187565-TCA-T | 15075685-TCA-T | ** | |||||||
22023418-A-C | 19861532-A-C | ** | |||||||
28716444-C-A | 26570297-C-A | ** | |||||||
14463363-C-A | 12342636-C-A | ** | |||||||
15777023-C-A | 13665143-C-A | ** | |||||||
2865147-C-A | 2997106-C-A | ** | |||||||
11028304-G-A | ** | ||||||||
15901234-C-A | 13789354-C-A | ** | |||||||
13935177-T-G | 11814471-T-G | ** | |||||||
10998220-C-A | ** | ||||||||
17548669-C-A | 15436789-C-A | ** | |||||||
15212455-C-A | 13100541-C-A | ** | |||||||
16006050-T-C | 13894170-T-C | ** | |||||||
22540527-C-A | 20378641-C-A | ** | |||||||
19218091-C-A | 17106211-C-A | ** | |||||||
13944588-C-A | 11823882-C-A | ** | |||||||
28659517-C-A | 26513370-C-A | ** | |||||||
10813546-A-C | ** | ||||||||
10678597-C-CCACCT | ** | ||||||||
8085603-C-T | 8217562-C-T | ** | |||||||
8085666-C-T | 8217625-C-T | ** | |||||||
22871382-C-A | 20709496-C-A | ** | |||||||
11026089-A-G | ** | ||||||||
7299651-G-T | 7431610-G-T | ** | |||||||
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19842208-A-C | 17730328-A-C | P5_Prx | ** | ||||||
19874055-T-A | 17762175-T-A | P5_Prx | ** | ||||||
20306241-G-T | 18144355-G-T | P5_Dst | ** | ||||||
20335031-C-T | 18173145-C-T | P5_Dst | ** | ||||||
20801650-T-A | 18639764-T-A | P4_Prx | ** | ||||||
20839562-C-A | 18677676-C-A | P4_Gap | ** | ||||||
21116872-A-G | 18954986-A-G | ** | |||||||
21201565-A-G | 19039679-A-G | FTA20138 | ** | ||||||
21263594-T-A | 19101708-T-A | ** | |||||||
21263602-C-T | 19101716-C-T | ** | |||||||
21324238-A-G | 19162352-A-G | ** | |||||||
21412307-C-A | 19250421-C-A | ** | |||||||
21476828-C-A | 19314942-C-A | ** | |||||||
21488655-A-G | 19326769-A-G | ** | |||||||
21915650-C-G | 19753764-C-G | ** | |||||||
21921932-A-G | 19760046-A-G | ** | |||||||
21934628-G-A | 19772742-G-A | ** | |||||||
21954969-G-T | 19793083-G-T | ** | |||||||
22023425-C-A | 19861539-C-A | ** | |||||||
22124487-TA-T | 19962601-TA-T | ** | |||||||
22125515-C-A | 19963629-C-A | ** | |||||||
22125645-T-C | 19963759-T-C | ** | |||||||
22128705-C-A | 19966819-C-A | ** | |||||||
22164467-C-A | 20002581-C-A | ** | |||||||
22204510-C-T | 20042624-C-T | ** | |||||||
22286908-TG-T | 20125022-TG-T | DYZ19 | ** | ||||||
22489556-G-A | 20327670-G-A | DYZ19 | ** | ||||||
22856146-C-A | 20694260-C-A | ** | |||||||
22871413-T-G | 20709527-T-G | ** | |||||||
22951352-C-A | 20789466-C-A | ** | |||||||
22974143-T-TA | 20812257-T-TA | ** | |||||||
22974150-T-G | 20812264-T-G | ** | |||||||
22997630-A-G | 20835744-A-G | ** | |||||||
23185952-C-A | 21024066-C-A | ** | |||||||
23259210-C-A | 21097324-C-A | ** | |||||||
23337100-T-C | 21175214-T-C | ** | |||||||
23372194-G-A | 21210308-G-A | ** | |||||||
23372205-A-T | 21210319-A-T | ** | |||||||
23372208-G-T | 21210322-G-T | ** | |||||||
23372210-C-A | 21210324-C-A | ** | |||||||
23372217-A-T | 21210331-A-T | ** | |||||||
23395717-C-A | 21233831-C-A | ** | |||||||
23512240-C-T | 21350354-C-T | ** | |||||||
23528889-T-C | 21367003-T-C | ** | |||||||
23788740-T-G | 21626854-T-G | ** | |||||||
23807127-A-G | 21645241-A-G | ** | |||||||
23848743-C-A | 21686857-C-A | ** | |||||||
24003147-C-A | 21857000-C-A | ** | |||||||
24003149-A-G | 21857002-A-G | ** | |||||||
24406550-C-A | 22260403-C-A | ** | |||||||
25872046-C-A | 23725899-C-A | P1_Y1 | ** | ||||||
26026529-C-A | 23880382-C-A | P1_Y1 | ** | ||||||
26055727-C-A | 23909580-C-A | P1_Y1 | ** | ||||||
26152171-C-G | 24006024-C-G | P1_Y1 | ** | ||||||
27714813-T-C | 25568666-T-C | P1_Y2 | ** | ||||||
28008179-T-A | 25862032-T-A | P1_Y2 | ** | ||||||
28550580-G-C | 26404433-G-C | ** | |||||||
28558115-C-A | 26411968-C-A | ** | |||||||
28614638-C-A | 26468491-C-A | ** | |||||||
28627229-C-A | 26481082-C-A | ** | |||||||
28657431-C-A | 26511284-C-A | ** | |||||||
28658647-C-A | 26512500-C-A | ** | |||||||
28763430-A-G | 26617283-A-G | ** | |||||||
56707263-A-G | ** | ||||||||
56826361-T-C | ** | ||||||||
56826369-A-G | ** | ||||||||
56838160-C-T | ** | ||||||||
56838458-A-G | ** | ||||||||
56838464-G-C | ** | ||||||||
22739741-G-A | 20577855-G-A | *** | |||||||
14506947-C-A | 12395152-C-A | *** | |||||||
20063939-T-A | 17952059-T-A | P5_Gap | *** | ||||||
9984520-C-A | 10146911-C-A | *** | |||||||
2790439-C-A | 2922398-C-A | *** | *** | ||||||
24973175-C-T | 22827028-C-T | g1 | *** | ||||||
7195301-T-A | 7327260-T-A | *** | |||||||
13454434-C-T | 11298758-C-T | *** | |||||||
14319617-GTA-G | 12198911-GTA-G | *** | |||||||
25272650-G-A | 23126503-G-A | P2_r1 | *** | ||||||
13865969-CGAATG-C | 11745263-CGAATG-C | 12×GAATG | *** | ||||||
22252364-T-A | 20090478-T-A | DYZ19 | *** | ||||||
22270111-T-C | 20108225-T-C | DYZ19 | *** | ||||||
22311718-G-A | 20149832-G-A | DYZ19 | *** | ||||||
22333825-T-A | 20171939-T-A | DYZ19 | *** | ||||||
22348503-G-A | 20186617-G-A | DYZ19 | *** | ||||||
22477690-C-T | 20315804-C-T | DYZ19 | *** | ||||||
24093319-C-T | 21947172-C-T | P3_b1 | *** | ||||||
24159527-G-A | 22013380-G-A | P3_b1 | *** | ||||||
24163230-G-C | 22017083-G-C | P3_b1 | *** | ||||||
25968688-AT-A | 23822541-AT-A | P1_Y1 | 8×T | *** | |||||
26216967-A-G | 24070820-A-G | P1_Y1 | *** | ||||||
58977267-T-A | 56831120-T-A | *** | |||||||
58977307-G-C | 56831160-G-C | *** | |||||||
13454439-T-C | 11298763-T-C | *** | |||||||
15842557-CTTT-C | 13730677-CTTT-C | 13×T | *** | ||||||
15991832-A-G | 13879952-A-G | *** | |||||||
22919356-C-T | 20757470-C-T | *** | |||||||
2719095-G-A | 2851054-G-A | *** | |||||||
10022060-C-A | 10184451-C-A | *** | |||||||
56835086-T-C | *** | ||||||||
13452231-TCCACT-G | 11296555-TCCACT-G | *** | |||||||
14831748-C-T | 12719815-C-T | *** | |||||||
18106353-GTT-G | 15994473-GTT-G | 15×T | *** | ||||||
15309665-C-A | 13197769-C-A | *** | |||||||
24359441-GA-G | 22213294-GA-G | 10×A | *** | ||||||
2834866-A-T | 2966825-A-T | *** | |||||||
15538026-GA-G | 13426146-GA-G | 9×A | *** | ||||||
17283113-GTTT-G | 15171233-GTTT-G | 13×T | *** | ||||||
21446241-G-T | 19284355-G-T | *** | |||||||
14025988-GAGAAAGAA-G,GAGAA | 11905282-GAGAAAGAA-G,GAGAA | 13×AGAA | *** | ||||||
21236242-CAAA-C | 19074356-CAAA-C | 15×A | *** | ||||||
2834862-A-T | 2966821-A-T | *** | |||||||
16733590-C-A | 14621710-C-A | *** | |||||||
14765700-G-T | 12653769-G-T | *** | |||||||
2835648-C-A | 2967607-C-A | *** | |||||||
14061349-A-T | 11940643-A-T | *** | |||||||
11014571-C-A | *** | ||||||||
4961164-G-GA | 5093123-G-GA | 9×A | *** | ||||||
31651-C-A | *** | ||||||||
13457550-T-C | 11301874-T-C | *** | |||||||
23056332-G-T | 20894446-G-T | *** | |||||||
22185855-C-CTT | 20023969-C-CTT | 25×T | *** | ||||||
13476865-GA-G | 11321189-GA-G | *** | |||||||
28633338-C-A | 26487191-C-A | *** | |||||||
18263453-C-A | 16151573-C-A | *** | |||||||
15045782-G-GT | 12933872-G-GT | 8×T | *** | ||||||
16620135-C-A | 14508255-C-A | *** | |||||||
14348835-C-A | 12228130-C-A | *** | |||||||
11672511-TA-T | *** | ||||||||
16040802-CTT-C,CT | 13928922-CTT-C,CT | 16×T | *** | ||||||
21238688-C-A | 19076802-C-A | *** | |||||||
10801682-C-CAATACATT | *** | ||||||||
27038870-C-A | 24892723-C-A | P1_r4 | *** | ||||||
19204013-C-A | 17092133-C-A | Y22516 | *** | ||||||
21177211-GT-G,GTT | 19015325-GT-G,GTT | 19×T | *** | ||||||
15479965-A-G | 13368085-A-G | *** | |||||||
9522499-C-A | 9684890-C-A | *** | |||||||
13298521-C-A | 11142845-C-A | *** | |||||||
3912873-C-A | 4044832-C-A | *** | |||||||
19537993-C-A | 17426113-C-A | *** | |||||||
21048141-C-A | 18886255-C-A | *** | |||||||
17919839-C-T | 15807959-C-T | *** | |||||||
2791410-G-T | 2923369-G-T | *** | |||||||
2881501-T-C | 3013460-T-C | *** | |||||||
3116233-G-A | 3248192-G-A | *** | |||||||
3275886-A-G | 3407845-A-G | *** | |||||||
3279791-T-A | 3411750-T-A | *** | |||||||
3332214-C-A | 3464173-C-A | *** | |||||||
3992026-C-T | 4123985-C-T | *** | |||||||
5620938-C-A | 5752897-C-A | *** | |||||||
6925840-C-A | 7057799-C-A | *** | |||||||
7247442-G-T | 7379401-G-T | *** | |||||||
7643593-G-A | 7775552-G-A | *** | |||||||
7991033-C-A | 8122992-C-A | *** | |||||||
8140662-T-C | 8272621-T-C | *** | |||||||
8888409-A-T | 9020368-A-T | *** | |||||||
9865169-G-T | 10027560-G-T | *** | |||||||
10667024-C-AGATTA,CGGATG | *** | ||||||||
10764547-TTTCAC-T,TTTAA | *** | ||||||||
10807282-G-A,C | *** | ||||||||
13952604-C-A | 11831898-C-A | *** | |||||||
14527166-C-A | 12415367-C-A | *** | |||||||
14544200-T-C | 12432401-T-C | *** | |||||||
14986695-A-G | 12874763-A-G | *** | |||||||
15002998-C-A | 12891083-C-A | *** | |||||||
15741845-G-T | 13629965-G-T | *** | |||||||
16577129-A-G | 14465249-A-G | *** | |||||||
17300558-C-A | 15188678-C-A | *** | |||||||
17362689-T-C | 15250809-T-C | *** | |||||||
17503457-C-A | 15391577-C-A | *** | |||||||
17637933-T-C | 15526053-T-C | *** | |||||||
17865237-C-T | 15753357-C-T | *** | |||||||
18406178-GA-G | 16294298-GA-G | P6_Gap | 8×A | *** | |||||
18687934-T-G | 16576054-T-G | *** | |||||||
18809780-C-A | 16697900-C-A | *** | |||||||
18850505-C-A | 16738625-C-A | *** | |||||||
19536899-G-A | 17425019-G-A | *** | |||||||
22029967-C-T | 19868081-C-T | *** | |||||||
22147697-A-T | 19985811-A-T | *** | |||||||
22743105-C-A | 20581219-C-A | *** | |||||||
23059473-C-A | 20897587-C-A | *** | |||||||
23272210-G-T | 21110324-G-T | *** | |||||||
23291418-C-A | 21129532-C-A | *** | |||||||
23299918-A-T | 21138032-A-T | *** | |||||||
23803287-G-T | 21641401-G-T | *** | |||||||
23986948-G-A | 21840801-G-A | *** | |||||||
25899803-A-G | 23753656-A-G | P1_Y1 | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.