Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > Z39589 > L1335/S530 > L1065 > Z16325 > S744 > S691 > BY3127 > S7361 > Y32812 > Y32814

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
498308
BigY3
498308
BigY2
498308
9908164-T-G 10070555-T-G YA*
26272784-G-T 24126637-G-T P1_Y1 ***A*A*
19754925-T-C 17643045-T-C FGC81368 P5_Prx 15×TTCCA*
27467214-T-G 25321067-T-G FGC7648 P1_Y2 5×TTAG**++
9099714-G-A 9262105-G-A Y88574 Y+++
9672720-G-GA 9835111-G-GA IR3_Prx *****+
14242802-G-A 12122096-G-A Y90776 YY+++
16583154-A-G 14471274-A-G Y96763 YY+++
16639554-T-G 14527674-T-G Y96897 YY+++
23239205-A-C 21077319-A-C Y111046 Y+++
4169295-A-T 4301254-A-T FT35870 +
4438998-A-G 4570957-A-G FT35924 +
4565856-T-A 4697815-T-A FT132794 +
4758350-C-A 4890309-C-A FT132861 +
13946154-C-T 11825448-C-T YY+
17648400-G-A 15536520-G-A FT134376 YY+
23092645-A-G 20930759-A-G FT37860 Y+
3241219-C-T 3373178-C-T FT241025 *
3241264-T-C 3373223-T-C *
3662943-G-A 3794902-G-A FT44784 *
22337792-C-T 20175906-C-T DYZ19 **
26099821-CCCTTTG-C 23953674-CCCTTTG-C P1_Y1 **
17479950-C-A 15368070-C-A **
3982781-G-GA 4114740-G-GA 9×A**
18191939-G-T 16080059-G-T **
16545413-CCAAA-C 14433533-CCAAA-C **
20975220-C-A 18813334-C-A P4_Dst **
6147467-A-T 6279426-A-T IR3_Dst **
24904703-C-T 22758556-C-T g1 **
10804834-G-C FT91756 **
11019438-C-G **
13460976-T-G 11305300-T-G **
10927474-A-T **
14981844-T-C 12869912-T-C **
18354074-G-T 16242194-G-T P6_Prx **
10808580-C-T **
10841131-G-C **
28542514-T-C 26396367-T-C **
14324920-TG-T 12204214-TG-T **
10747843-G-T **
7116183-C-A 7248142-C-A **
22023247-A-G 19861361-A-G **
27862654-T-G 25716507-T-G P1_Y2 **
10973653-A-T **
15677155-G-T 13565275-G-T **
10992693-A-C **
22816364-C-T 20654478-C-T **
9075957-C-A 9238348-C-A **
10763242-A-C **
10776199-C-T **
7222218-C-A 7354177-C-A **
15358739-C-A 13246858-C-A **
2852861-C-A 2984820-C-A **
15940305-T-A 13828425-T-A **
3849134-A-AT 3981093-A-AT 10×T**
11001864-C-A **
6179636-A-C 6311595-A-C IR3_Dst **
56834580-C-A **
7165304-G-T 7297263-G-T **
11004934-C-A **
6663258-C-A 6795217-C-A **
7075022-A-C 7206981-A-C **
3051410-C-A 3183369-C-A **
11025985-T-C **
6784646-C-A 6916605-C-A **
9034671-C-A 9197062-C-A **
17928949-C-A 15817069-C-A **
8389595-GA-G 8521554-GA-G **
17481181-C-A 15369301-C-A **
9125360-T-A **
10787230-C-A **
14100336-C-A 11979630-C-A **
14232964-G-T 12112258-G-T **
15358701-T-A 13246820-T-A **
10900810-A-C **
10900825-ACTCCT-A **
10624521-C-A **
21012311-C-A 18850425-C-A P4_Dst **
23128746-C-A 20966860-C-A **
26122108-A-T 23975961-A-T P1_Y1 **
3252459-C-A 3384418-C-A **
10849637-A-ACATTC **
7873799-G-C 8005758-G-C **
14284551-C-A 12163845-C-A **
13988773-C-A 11868067-C-A **
15755252-C-A 13643372-C-A **
16692071-C-CAA 14580191-C-CAA 9×A**
22081037-C-A 19919151-C-A **
18630600-C-A 16518720-C-A **
2892568-A-G 3024527-A-G **
2649582-C-A 2781541-C-A **
2682829-T-C 2814788-T-C **
2740463-G-T 2872422-G-T **
2759491-G-T 2891450-G-T **
2771874-T-C 2903833-T-C **
2791169-A-C 2923128-A-C **
2812928-A-G 2944887-A-G **
2839891-C-A 2971850-C-A **
2857137-C-A 2989096-C-A **
2857340-C-T 2989299-C-T **
2892572-T-C 3024531-T-C **
2892573-C-T 3024532-C-T **
2970891-A-C 3102850-A-C **
2999870-G-A 3131829-G-A **
3099178-G-A 3231137-G-A **
3184896-A-C 3316855-A-C **
3249863-G-T 3381822-G-T **
3267705-C-A 3399664-C-A **
3276752-G-A 3408711-G-A **
3289050-C-T 3421009-C-T **
3345867-C-A 3477826-C-A **
3409645-C-G 3541604-C-G **
3536285-T-C 3668244-T-C **
3583491-A-C 3715450-A-C **
3817965-C-A 3949924-C-A **
3833626-C-A 3965585-C-A **
3850034-C-T 3981993-C-T **
4017054-C-A 4149013-C-A **
4100823-C-A 4232782-C-A **
4208992-T-C 4340951-T-C **
4222714-A-G 4354673-A-G **
4241413-C-A 4373372-C-A **
4343259-C-A 4475218-C-A **
4357861-A-T 4489820-A-T **
4374923-C-A 4506882-C-A **
4402615-A-T 4534574-A-T **
4474079-TACAATGA-T 4606038-TACAATGA-T **
4580613-T-A 4712572-T-A **
4615368-G-T 4747327-G-T **
4615541-T-C 4747500-T-C **
4695824-C-A 4827783-C-A **
4757586-A-C 4889545-A-C **
4919616-T-A 5051575-T-A **
5022213-C-A 5154172-C-A **
5059685-A-G 5191644-A-G **
5153759-G-T 5285718-G-T **
5153801-T-C 5285760-T-C **
5184214-C-T 5316173-C-T **
5253789-C-A 5385748-C-A **
5358867-C-A 5490826-C-A **
5359068-G-T 5491027-G-T **
5426479-C-T 5558438-C-T **
5446975-C-A 5578934-C-A **
5694558-A-C 5826517-A-C **
5842521-G-A 5974480-G-A **
5851322-C-A 5983281-C-A **
5869990-T-TC 6001949-T-TC **
5999579-T-A 6131538-T-A **
6147479-G-C 6279438-G-C IR3_Dst **
6238149-T-TC 6370108-T-TC IR3_Dst **
6478694-T-A 6610653-T-A **
6491273-C-A 6623232-C-A **
6505629-C-A 6637588-C-A **
6514153-C-A 6646112-C-A **
6645405-A-T 6777364-A-T **
6663103-C-A 6795062-C-A **
6693083-C-A 6825042-C-A Y82323 **
6765946-C-A 6897905-C-A **
6807282-T-A 6939241-T-A **
6917050-C-A 7049009-C-A A11993 **
6981155-C-A 7113114-C-A **
7029646-A-G 7161605-A-G **
7058850-G-T 7190809-G-T **
7080729-C-A 7212688-C-A **
7090668-C-A 7222627-C-A **
7097469-T-G 7229428-T-G **
7098008-C-A 7229967-C-A **
7142824-C-A 7274783-C-A **
7160417-C-A 7292376-C-A **
7166923-C-T 7298882-C-T **
7169968-C-A 7301927-C-A **
7270308-GA-G 7402267-GA-G **
7287840-C-A 7419799-C-A **
7304439-C-A 7436398-C-A **
7306300-A-G 7438259-A-G **
7623672-AG-A 7755631-AG-A **
7629771-G-T 7761730-G-T **
7832335-C-A 7964294-C-A **
7873777-A-G 8005736-A-G **
7873779-G-C 8005738-G-C **
7873787-T-C 8005746-T-C Y62738 **
7873788-G-A 8005747-G-A **
7873792-T-A 8005751-T-A **
7873811-T-C 8005770-T-C **
7941748-C-A 8073707-C-A **
7969586-T-TG 8101545-T-TG **
8002362-T-C 8134321-T-C **
8109894-T-G 8241853-T-G **
8151516-G-T 8283475-G-T **
8170343-C-A 8302302-C-A **
8326059-C-A 8458018-C-A **
8333612-C-A 8465571-C-A **
8704320-C-A 8836279-C-A **
8720527-G-A 8852486-G-A **
8724659-G-T 8856618-G-T **
8848459-C-A 8980418-C-A **
8912701-C-A 9044660-C-A **
9056332-C-A **
9125369-C-T **
8995809-A-C 9158200-A-C **
9025160-G-T 9187551-G-T **
9034589-A-G 9196980-A-G **
9047589-C-G 9209980-C-G **
9371411-T-C 9533802-T-C **
9437028-C-A 9599419-C-A **
9438098-T-C 9600489-T-C **
9441598-C-A 9603989-C-A **
9442175-A-G 9604566-A-G **
9465278-C-A 9627669-C-A **
9508033-T-C 9670424-T-C **
9678432-G-T 9840823-G-T IR3_Prx **
9700726-C-A 9863117-C-A IR3_Prx **
9700742-C-A 9863133-C-A IR3_Prx **
9810787-A-T 9973178-A-T **
9830925-C-T 9993316-C-T **
9839420-C-A 10001811-C-A **
9907409-G-T 10069800-G-T **
9962718-G-T 10125109-G-T **
9978577-C-A 10140968-C-A **
10002793-T-A 10165184-T-A **
10030160-C-A 10192551-C-A **
10040723-C-A 10203114-C-A **
10056984-C-T 10219375-C-T **
10631482-C-A **
10632643-T-A **
10658176-C-T **
10658552-C-A **
10658553-C-T **
10658562-C-T **
10658601-C-G **
10658602-C-T **
10658743-T-A **
10658791-T-C **
10658820-A-C **
10666595-T-A **
10666599-A-C **
10666603-C-A **
10666608-T-A **
10666612-T-C **
10666622-T-G **
10666638-T-C **
10666643-T-A **
10666644-T-C **
10666664-TC-T **
10666667-G-GGC **
10668309-C-T **
10673828-C-CAATCT **
10673835-C-T **
10673873-C-A BY83666 **
10673878-C-CAATCT **
10673908-C-CGCAAT **
10673909-A-ACG **
10683230-C-A **
10685932-CCAAT-C **
10693867-T-G **
10757211-T-C **
10763252-T-C **
10773600-C-A **
10774075-C-A **
10776171-A-G **
10776179-G-T **
10789879-T-G **
10789909-T-C **
10801603-T-C **
10841283-A-C **
10846980-T-C **
10859071-A-G **
10859061-TTTCCA-T **
10869009-A-C **
10882688-T-A **
10882720-G-T **
10883702-A-C **
10893860-CCATTT-C **
10894511-C-A **
10895750-G-A FT45513 **
10926858-C-T **
10926875-C-T **
10927591-T-C **
10927930-C-A **
10931649-C-A **
10935285-T-A **
10953779-G-T **
10963051-C-A **
10964338-G-T **
10965464-C-A **
10967423-C-A **
10973614-T-TTCCAC **
10973658-A-T **
10975948-A-T **
10979819-A-G **
10979887-C-G **
10987912-T-C **
10997059-C-A **
11011983-C-A **
11019421-C-CTACTT **
11019474-C-CACTCT **
11026009-A-C **
13255197-C-A 11099521-C-A **
13255226-C-A 11099550-C-A **
13271799-C-A 11116123-C-A **
13313983-C-A 11158307-C-A **
13364051-G-A 11208375-G-A **
13410376-C-A 11254700-C-A **
13479711-C-A 11324035-C-A **
13513311-C-A 11357635-C-A **
13585222-C-G 11429546-C-G **
13614137-A-C 11458461-A-C **
13858940-G-T 11738234-G-T **
13870422-A-C 11749716-A-C **
13909427-C-A 11788721-C-A **
13921598-C-A 11800892-C-A FT163108 **
13932893-A-C 11812187-A-C **
13961411-A-G 11840705-A-G **
14022042-T-A 11901336-T-A **
14030340-C-A 11909634-C-A **
14100340-A-G 11979634-A-G **
14101015-G-T 11980309-G-T **
14115047-C-A 11994341-C-A FGC36140 **
14165937-A-C 12045231-A-C **
14183426-C-A 12062720-C-A **
14200558-C-A 12079852-C-A **
14203747-C-A 12083041-C-A **
14253203-A-G 12132497-A-G **
14312292-C-A 12191586-C-A **
14347823-C-A 12227118-C-A **
14376673-C-A 12255969-C-A **
14413106-C-A 12292403-C-A **
14464202-G-T 12343475-G-T **
14499487-C-T 12387692-C-T **
14508738-T-G 12396943-T-G **
14537726-GA-G 12425927-GA-G **
14552592-G-T 12440793-G-T **
14712648-G-T 12600715-G-T **
14717544-G-T 12605612-G-T **
14717581-A-T 12605649-A-T **
14742036-AC-A 12630104-AC-A **
14742154-G-T 12630222-G-T **
14743534-A-T 12631603-A-T **
14764380-C-A 12652449-C-A **
14785733-C-A 12673803-C-A **
14798611-C-A 12686682-C-A **
14803101-G-A 12691172-G-A Y49892 **
14803115-T-G 12691186-T-G **
14803122-A-G 12691193-A-G **
14803124-C-T 12691195-C-T **
14803125-A-G 12691196-A-G **
14805929-C-A 12694000-C-A **
14805946-C-A 12694017-C-A **
14990329-C-A 12878414-C-A **
15113623-T-C 13001710-T-C **
15168963-C-A 13057049-C-A **
15206007-T-C 13094093-T-C **
15210727-T-C 13098813-T-C **
15270876-C-A 13158965-C-A **
15288069-C-G 13176168-C-G **
15298270-G-T 13186369-G-T **
15338803-A-T 13226921-A-T **
15358700-G-A 13246819-G-A **
15386328-C-A 13274448-C-A **
15391313-A-G 13279433-A-G **
15403434-G-T 13291554-G-T **
15435169-G-T 13323289-G-T **
15498111-G-A 13386231-G-A **
15499497-C-A 13387617-C-A **
15556967-C-A 13445087-C-A **
15558994-C-A 13447114-C-A **
15565472-C-A 13453592-C-A **
15619947-C-A 13508067-C-A **
15642900-C-G 13531020-C-G **
15685161-C-A 13573281-C-A **
15730474-C-T 13618594-C-T **
15741733-T-G 13629853-T-G **
15767079-C-A 13655199-C-A Y94723 **
15922398-T-A 13810518-T-A **
15922399-G-T 13810519-G-T **
15928531-A-T 13816651-A-T **
16050000-C-A 13938120-C-A **
16072998-G-T 13961118-G-T **
16108741-C-A 13996861-C-A P8_Prx **
16118865-C-T 14006985-C-T P8_Prx **
16118999-T-TCTC 14007119-T-TCTC P8_Prx **
16134564-A-C 14022684-A-C **
16191616-G-A 14079736-G-A **
16243073-A-T 14131193-A-T **
16245577-C-A 14133697-C-A **
16278002-C-A 14166122-C-A **
16295723-A-G 14183843-A-G **
16341049-C-A 14229169-C-A **
16354947-A-G 14243067-A-G **
16429230-A-G 14317350-A-G **
16429251-T-A 14317371-T-A **
16464748-C-G 14352868-C-G **
16467401-C-A 14355521-C-A **
16508822-C-A 14396942-C-A **
16528159-G-T 14416279-G-T **
16530976-C-A 14419096-C-A **
16667177-C-A 14555297-C-A **
16679442-C-A 14567562-C-A **
16779111-C-A 14667231-C-A **
16786198-A-T 14674318-A-T **
16786199-A-T 14674319-A-T **
16921223-C-A 14809343-C-A **
16926835-A-T 14814955-A-T **
17014753-C-A 14902873-C-A **
17187505-G-A 15075625-G-A **
17222742-T-C 15110862-T-C **
17276133-T-G 15164253-T-G **
17309956-C-A 15198076-C-A **
17313405-C-A 15201525-C-A **
17313411-C-A 15201531-C-A **
17367539-C-A 15255659-C-A **
17440386-C-T 15328506-C-T **
17455985-C-A 15344105-C-A **
17498904-A-T 15387024-A-T **
17503986-T-C 15392106-T-C **
17567331-C-A 15455451-C-A **
17580077-A-G 15468197-A-G **
17589220-C-A 15477340-C-A **
17597857-C-A 15485977-C-A **
17600455-T-C 15488575-T-C **
17631680-C-A 15519800-C-A **
17715052-CAATGTAATTACAAATGTAATG-C 15603172-CAATGTAATTACAAATGTAATG-C **
17716637-C-A 15604757-C-A **
17770484-C-G 15658604-C-G **
17775114-G-T 15663234-G-T **
17840089-G-A 15728209-G-A **
17854337-C-A 15742457-C-A **
17860801-G-T 15748921-G-T **
17918641-C-A 15806761-C-A FT347560 **
17923659-A-C 15811779-A-C **
18020800-C-A 15908920-C-A **
18022321-G-A 15910441-G-A **
18086114-AG-A 15974234-AG-A **
18092911-G-C 15981031-G-C **
18151837-C-T 16039957-C-T **
18159807-C-T 16047927-C-T **
18174502-C-A 16062622-C-A **
18202116-T-C 16090236-T-C **
18271009-G-A 16159129-G-A **
18381785-C-A 16269905-C-A P6_Gap **
18401598-C-A 16289718-C-A P6_Gap **
18661623-C-A 16549743-C-A **
18672565-C-A 16560685-C-A **
18682786-C-A 16570906-C-A **
18714115-CTT-C 16602235-CTT-C 9×T**
18723951-C-A 16612071-C-A **
18750255-A-C 16638375-A-C **
18790257-T-C 16678377-T-C **
18825442-C-A 16713562-C-A **
18948233-C-A 16836353-C-A **
18959199-A-C 16847319-A-C **
18959209-CG-C 16847329-CG-C **
19012519-T-C 16900639-T-C **
19044541-A-G 16932661-A-G **
19129674-C-A 17017794-C-A **
19280783-C-A 17168903-C-A **
19537949-C-A 17426069-C-A **
19686890-G-T 17575010-G-T BY48449 P5_Prx **
19739351-A-ACAG 17627471-A-ACAG P5_Prx **
20213004-TTTTCTTCTTC-T 18051118-TTTTCTTCTTC-T P5_Dst **
20458558-C-T 18296672-C-T P5_Dst **
20707550-C-G 18545664-C-G P4_Prx **
20840387-C-A 18678501-C-A P4_Gap **
20850617-T-TGA 18688731-T-TGA P4_Dst **
21029485-T-G 18867599-T-G P4_Dst **
21046952-T-A 18885066-T-A **
21156878-C-A 18994992-C-A **
21238658-G-GA 19076772-G-GA **
21375644-A-G 19213758-A-G **
21522275-C-A 19360389-C-A **
21651797-C-A 19489911-C-A **
21713468-T-A 19551582-T-A FT106015 **
21875889-C-A 19714003-C-A **
21921962-A-C 19760076-A-C **
21935200-C-A 19773314-C-A **
21946422-T-C 19784536-T-C FTB8020 **
21987362-G-A 19825476-G-A Y108069 **
22028814-C-A 19866928-C-A **
22045543-C-A 19883657-C-A **
22052567-G-A 19890681-G-A **
22075776-A-G 19913890-A-G **
22103392-A-G 19941506-A-G **
22133851-C-A 19971965-C-A **
22166526-C-A 20004640-C-A **
22170372-A-G 20008486-A-G **
22172534-G-T 20010648-G-T **
22175928-C-T 20014042-C-T **
22204264-T-A 20042378-T-A **
22205498-T-A 20043612-T-A **
22729438-G-A 20567552-G-A **
22766831-T-G 20604945-T-G **
22824883-C-A 20662997-C-A **
22881521-C-A 20719635-C-A **
22893247-C-A 20731361-C-A **
22994781-C-T 20832895-C-T **
23082034-G-T 20920148-G-T **
23098815-T-A 20936929-T-A **
23167739-A-G 21005853-A-G **
23343654-C-A 21181768-C-A **
23368777-C-A 21206891-C-A **
23377473-TTG-T 21215587-TTG-T **
23419128-C-A 21257242-C-A **
23421016-A-C 21259130-A-C **
23505157-TCAA-T 21343271-TCAA-T **
23570294-C-A 21408408-C-A **
23579215-C-T 21417329-C-T **
23603141-T-G 21441255-T-G **
23625658-G-C 21463772-G-C ZS4291 4×AAAC**
23810700-T-C 21648814-T-C **
24223192-G-A 22077045-G-A P3_b1 **
24290749-G-T 22144602-G-T P3_t1 20×CA**
24402334-C-T 22256187-C-T **
24450522-C-A 22304375-C-A **
24904701-G-T 22758554-G-T g1 **
25994227-T-TC 23848080-T-TC P1_Y1 **
26184260-A-G 24038113-A-G P1_Y1 **
26314819-G-T 24168672-G-T P1_Y1 **
27546764-G-T 25400617-G-T P1_Y2 **
27570781-C-T 25424634-C-T P1_Y2 **
27620673-C-A 25474526-C-A P1_Y2 **
27714369-A-C 25568222-A-C P1_Y2 **
27908247-C-A 25762100-C-A P1_Y2 **
28438094-G-A 26291947-G-A P1_gr2 **
28498000-C-A 26351853-C-A **
28520649-G-A 26374502-G-A **
28549880-GC-G 26403733-GC-G **
28567502-C-A 26421355-C-A **
28588797-C-A 26442650-C-A **
28623185-G-C 26477038-G-C **
28623444-T-C 26477297-T-C **
28698728-G-T 26552581-G-T **
28748366-G-T 26602219-G-T **
56734752-T-C **
56834588-C-A **
56834589-A-C **
56834973-A-C **
56840659-T-C **
56844693-C-A **
56846080-ACCCTCT-A **
56849461-G-T **
9531236-GT-G 9693627-GT-G IR3_Prx **
3076069-CTTTTT-C 3208028-CTTTTT-C 25×T**
20479512-CTTTT-C 18317626-CTTTT-C P5_Dst 19×T**
4823716-C-T 4955675-C-T **
5049432-T-C 5181391-T-C **
5485984-A-C 5617943-A-C **
5965102-C-T 6097061-C-T FT36254 **
6114890-T-C 6246849-T-C **
9680748-A-T 9843139-A-T IR3_Prx **
15182355-T-C 13070441-T-C **
17898562-T-A 15786682-T-A **
15324344-TG-T 13212462-TG-T ***
13454529-C-A 11298853-C-A ***
10013170-TG-T 10175561-TG-T ***
10013175-C-G 10175566-C-G ***
6434962-C-T 6566921-C-T ***
8730940-TAAC-T 8862899-TAAC-T ***
13445361-AC-A 11289685-AC-A ***
14101342-TCTC-T 11980636-TCTC-T ***
14642451-G-T 12530520-G-T ***
17029465-G-A 14917585-G-A 15×A***
18708972-GTA-G 16597092-GTA-G ***
9903960-GACAC-G 10066351-GACAC-G 15×AC******
14564996-T-C 12453196-T-C FTA31009 ***
19226204-G-A 17114324-G-A ******
24362321-C-T 22216174-C-T ***
28788556-G-T 26642409-G-T ***
28788031-T-A 26641884-T-A ***
13437493-G-A 11281817-G-A ***
13846569-G-A 11725863-G-A FT288011 ***
6744516-C-A 6876475-C-A ***
8102680-C-A 8234639-C-A ******
13450428-CTATTCCATTCCATTCCATTCCATTCCATTCCA-C 11294752-CTATTCCATTCCATTCCATTCCATTCCATTCCA-C ***
13475230-C-A 11319554-C-A ***
13475249-G-C 11319573-G-C ***
13475265-C-A 11319589-C-A ***
22266564-T-C 20104678-T-C DYZ19 ***
24225900-A-G 22079753-A-G P3_b1 ***
24826958-A-G 22680811-A-G P3_b2 ***
16941513-C-A 14829633-C-A ***
10844201-T-A ***
10844207-C-T ***
10844260-T-G ***
8568501-A-T 8700460-A-T ***
56834454-A-ACTCCG ***
56834459-A-T ***
2860022-CT-C,CTT 2991981-CT-C,CTT 14×T***
6780751-A-G 6912710-A-G ***
15993671-G-A 13881791-G-A ***
15622702-C-A 13510822-C-A ***
23197360-CAAAA-C,CA 21035474-CAAAA-C,CA 17×A***
21146275-CT-C,CTT 18984389-CT-C,CTT 17×T***
13938863-C-A 11818157-C-A ***
10934827-C-T ***
13488247-G-A 11332571-G-A ***
10934812-T-G ***
10934842-C-G ***
10755466-C-A ***
10751046-T-C ***
18340489-TACACAC-T,TAC 16228609-TACACAC-T,TAC P6_Prx 12×AC***
10987858-C-A ***
10746897-C-A ***
10844219-A-T ***
2696399-C-T 2828358-C-T 12×T***
2948150-C-A 3080109-C-A ***
3279613-C-T 3411572-C-T Y81848 ***
4282473-C-A 4414432-C-A ***
4502853-T-C 4634812-T-C ***
4567234-C-A 4699193-C-A ***
4701229-G-T 4833188-G-T ***
6878039-T-A 7009998-T-A ***
7080585-G-T 7212544-G-T ***
7176076-C-A 7308035-C-A ***
7424034-A-G 7555993-A-G ***
8286776-C-A 8418735-C-A ***
8379318-C-A 8511277-C-A ***
8466185-C-A 8598144-C-A ***
8832732-C-A 8964691-C-A ***
8970151-T-C 9132542-T-C ***
8977948-C-T 9140339-C-T ***
9873040-G-T 10035431-G-T ***
9892575-C-A 10054966-C-A ***
10876891-TC-T ***
10934841-T-G ***
10956594-C-CGGATT ***
10992219-TC-T ***
10992752-C-A ***
10994373-ACTGCG-A,ATTGCA ***
11013197-C-A ***
11665914-G-T ***
14073633-C-A 11952927-C-A ***
14090725-C-A 11970019-C-A ***
14753933-CAA-C,CA 12642002-CAA-C,CA 12×A***
14823420-T-C 12711487-T-C ***
16320202-G-T 14208322-G-T ***
16430351-C-A 14318471-C-A ***
16889733-C-A 14777853-C-A ***
17581304-A-G 15469424-A-G ***
17997506-C-A 15885626-C-A P7_Gap ***
18261734-T-C 16149854-T-C ***
18382697-C-A 16270817-C-A P6_Gap ***
19037917-C-A 16926037-C-A ***
19077123-C-A 16965243-C-A ***
21738490-C-A 19576604-C-A ***
22018868-C-A 19856982-C-A ***
22127974-TC-T,TT 19966088-TC-T,TT ***
22538710-C-A 20376824-C-A ***
22768344-T-A 20606458-T-A ***
23377528-A-T 21215642-A-T ***
23471037-T-C 21309151-T-C ***
28808618-T-A,G 26662471-T-A,G ***
56827523-TTTCCTTTCCTTTCCATTCCA-T,TTTCCTTTCCTTTCCACTCCA ***
56831393-C-CCACTCCATTC,CCACTCCATTT ***
56833286-C-T ***
16612636-CT-C,CTT 14500756-CT-C,CTT 15×T***
3205858-CAAA-C 3337817-CAAA-C 15×A***
7195227-CAAAA-C,CAAA 7327186-CAAAA-C,CAAA 17×A***
22251945-C-A 20090059-C-A BY214103 DYZ19 ***
8751101-T-C 8883060-T-C ***
14564958-A-G 12453158-A-G ***
28613771-CTT-C,CT 26467624-CTT-C,CT 16×T***
14564979-A-G 12453179-A-G FTA31008 ***
22949878-CT-C,CTT 20787992-CT-C,CTT 23×T***
14784701-CTTTT-C,CTTT 12672771-CTTTT-C,CTTT 22×T***
13455741-T-A 11300065-T-A ***
13898366-CA-C,CAA 11777660-CA-C,CAA 15×A***
3119727-A-G 3251686-A-G ***
3119728-ATAC-A 3251687-ATAC-A ***
3307849-A-G 3439808-A-G ***
5435181-T-C 5567140-T-C ***
5924711-CA-C 6056670-CA-C ***
8102571-T-C 8234530-T-C ***
9420196-A-G 9582587-A-G ***
9903960-GACACAC-G,GAC 10066351-GACACAC-G,GAC 15×AC***
13467946-G-A,C 11312270-G-A,C ***
14101338-T-C 11980632-T-C ***
14101353-T-C 11980647-T-C ***
14564980-C-T 12453180-C-T ***
21362843-G-T 19200957-G-T ***
21639038-T-TAAA 19477152-T-TAAA 25×A***
22251946-C-T 20090060-C-T DYZ19 ***
24386848-C-CTA 22240701-C-CTA ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.