Martin
FTDNA: 428489, BigY2: 428489Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 428489 | BigY2 428489 | Manual Edits |
---|---|---|---|---|---|---|---|---|---|---|
6213946-C-T | 6345905-C-T | IR3_Dst | *** | A* | ||||||
19691258-G-A | 17579378-G-A | P5_Prx | *** | A* | ||||||
19729922-G-A | 17618042-G-A | P5_Prx | *** | A* | ||||||
19956103-G-C | 17844223-G-C | P5_Prx | *** | A* | ||||||
20661725-T-C | 18499839-T-C | P4_Prx | *** | A* | ||||||
24274822-T-C | 22128675-T-C | P3_b1 | *** | A* | ||||||
24281807-G-T | 22135660-G-T | P3_t1 | *** | A* | ||||||
25942452-C-G | 23796305-C-G | P1_Y1 | *** | A* | ||||||
24553426-AAAAT-A | 22407279-AAAAT-A | P3_t2 | 4×AAAT | + | ||||||
6226003-T-C | 6357962-T-C | BY209231 | IR3_Dst | ** | + | |||||
8360632-C-G | 8492591-C-G | Y63581 | Y | Y | + | + | ||||
13843188-C-T | 11722482-C-T | Y65631 | + | + | ||||||
16283169-C-T | 14171289-C-T | Y69591 | Y | Y | + | + | ||||
16403740-C-T | 14291860-C-T | YP4851 | Y | Y | + | + | ||||
16924120-C-T | 14812240-C-T | Y70747 | Y | Y | + | + | ||||
17471870-G-T | 15359990-G-T | Y71731 | Y | Y | + | + | ||||
18129348-C-A | 16017468-C-A | Y73129 | Y | Y | + | + | ||||
21666065-C-T | 19504179-C-T | Y76933 | Y | Y | + | + | ||||
22192865-C-T | 20030979-C-T | Y77929 | Y | Y | + | + | ||||
22423667-A-G | 20261781-A-G | DYZ19 | + | |||||||
22484233-G-T | 20322347-G-T | BY53278 | DYZ19 | + | + | |||||
28812928-A-T | 26666781-A-T | BY152107 | *** | + | ||||||
15942760-G-GTAGA | 13830880-G-GTAGA | 7×TAGA | *** | * | ||||||
22275169-A-G | 20113283-A-G | DYZ19 | *** | * | ||||||
22314314-G-A | 20152428-G-A | BY217128 | DYZ19 | *** | * | |||||
22255516-G-T | 20093630-G-T | DYZ19 | * | |||||||
13550778-C-A | 11395102-C-A | ** | ||||||||
21515812-G-A | 19353926-G-A | ** | ||||||||
13456019-GATTCCATTCCATTCC-G | 11300343-GATTCCATTCCATTCC-G | 11×ATTCC | ** | |||||||
16077541-AGC-A | 13965661-AGC-A | ** | ||||||||
17474838-C-T | 15362958-C-T | ** | ||||||||
21133538-C-A | 18971652-C-A | ** | ||||||||
14326500-C-A | 12205794-C-A | FGC42958 | FGC42963 | ** | ||||||
7362048-T-A | 7494007-T-A | Y30429 | 10×TA | ** | ||||||
22252137-A-T | 20090251-A-T | DYZ19 | ** | |||||||
15115305-C-A | 13003392-C-A | ** | ||||||||
15931853-G-T | 13819973-G-T | ** | ** | |||||||
21515732-G-A | 19353846-G-A | FGC59662 | ** | |||||||
10748113-C-A | ** | |||||||||
7621950-C-A | 7753909-C-A | ** | ||||||||
10927883-C-G | ** | |||||||||
23434518-C-A | 21272632-C-A | ** | ||||||||
17081319-AT-A | 14969439-AT-A | ** | ||||||||
10961403-C-T | ** | |||||||||
15342650-C-A | 13230769-C-A | ** | ||||||||
11030260-GT-G | ** | |||||||||
15340471-A-T | 13228590-A-T | ** | ||||||||
5359083-G-T | 5491042-G-T | ** | ||||||||
21155229-C-A | 18993343-C-A | ** | ||||||||
6795262-C-A | 6927221-C-A | ** | ||||||||
17676463-T-TAA | 15564583-T-TAA | 11×A | ** | |||||||
10666689-CATTGTA-C | ** | |||||||||
15252787-G-A | 13140873-G-A | ** | ||||||||
4983800-G-T | 5115759-G-T | ** | ||||||||
10851002-C-A | ** | |||||||||
10851027-C-A | ** | |||||||||
10851036-A-C | ** | |||||||||
10851052-C-G | ** | |||||||||
10851053-T-C | ** | |||||||||
10825237-T-G | ** | |||||||||
7363940-C-A | 7495899-C-A | ** | ||||||||
10666700-C-CA | ** | |||||||||
10832991-G-T | ** | |||||||||
15358739-C-A | 13246858-C-A | ** | ||||||||
10805536-G-T | ** | |||||||||
13935589-C-A | 11814883-C-A | ** | ||||||||
2772512-C-CA | 2904471-C-CA | 25×A | ** | |||||||
18688500-CA-C | 16576620-CA-C | 20×A | ** | |||||||
17306321-C-A | 15194441-C-A | ** | ||||||||
14488596-C-T | 12367865-C-T | ** | ||||||||
10666651-C-CA | ** | |||||||||
28754846-C-A | 26608699-C-A | ** | ||||||||
10667725-C-T | FT91511 | ** | ||||||||
10667742-G-C | ** | |||||||||
20602134-T-TC | 18440248-T-TC | P5_Dst | ** | |||||||
10763153-T-TTCCATTCCACTCCACTCCAC | ** | |||||||||
17310923-A-T | 15199043-A-T | FT181015 | ** | |||||||
28788055-A-G | 26641908-A-G | ** | ||||||||
27971754-C-CA | 25825607-C-CA | P1_Y2 | ** | |||||||
22048581-C-A | 19886695-C-A | ** | ||||||||
3285845-C-A | 3417804-C-A | ** | ||||||||
16702142-C-A | 14590262-C-A | ** | ||||||||
13233532-C-A | 11077856-C-A | ** | ||||||||
28461593-C-A | 26315446-C-A | ** | ||||||||
6403521-C-T | 6535480-C-T | ** | ||||||||
13887463-G-A | 11766757-G-A | ** | ||||||||
17081313-A-T | 14969433-A-T | ** | ||||||||
7087911-T-G | 7219870-T-G | ** | ||||||||
19745476-T-TC | 17633596-T-TC | P5_Prx | ** | |||||||
10758368-C-A | ** | |||||||||
13871372-C-A | 11750666-C-A | ** | ||||||||
21446257-C-A | 19284371-C-A | ** | ||||||||
7000382-T-C | 7132341-T-C | ** | ||||||||
3385176-C-A | 3517135-C-A | ** | ||||||||
11030288-A-G | ** | |||||||||
11030291-T-TTACTTCAG | ** | |||||||||
11030296-TCAC-T | ** | |||||||||
13224516-C-A | 11068840-C-A | ** | ||||||||
17224424-C-A | 15112544-C-A | ** | ||||||||
19448172-C-A | 17336292-C-A | ** | ||||||||
19206734-C-CA | 17094854-C-CA | ** | ||||||||
8806893-C-A | 8938852-C-A | ** | ||||||||
17504953-C-A | 15393073-C-A | ** | ||||||||
20424848-A-G | 18262962-A-G | BY212172 | P5_Dst | ** | ||||||
15212442-C-A | 13100528-C-A | ** | ||||||||
25974655-C-A | 23828508-C-A | P1_Y1 | ** | |||||||
10666667-G-GC | ** | |||||||||
8715062-C-A | 8847021-C-A | ** | ||||||||
16033388-C-A | 13921508-C-A | ** | ||||||||
20022445-T-TA | 17910565-T-TA | P5_Prx | ** | |||||||
18948023-C-A | 16836143-C-A | ** | ||||||||
23779743-C-A | 21617857-C-A | ** | ||||||||
10951073-T-C | FT437872 | ** | ||||||||
6461565-C-A | 6593524-C-A | ** | ||||||||
10951100-C-T | ** | |||||||||
10951120-A-C | ** | |||||||||
10951126-C-T | ** | |||||||||
10973804-C-A | ** | |||||||||
15131652-C-A | 13019739-C-A | ** | ||||||||
10667814-C-A | ** | |||||||||
17898219-A-G | 15786339-A-G | ** | ||||||||
10769645-C-T | FT430414 | ** | ||||||||
21515733-G-C | 19353847-G-C | ** | ||||||||
21515734-G-A | 19353848-G-A | ** | ||||||||
21515780-G-T | 19353894-G-T | ** | ||||||||
21515787-C-T | 19353901-C-T | ** | ||||||||
21515799-C-G | 19353913-C-G | ** | ||||||||
19464045-G-T | 17352165-G-T | ** | ||||||||
14694866-C-A | 12582932-C-A | ** | ||||||||
5613507-C-A | 5745466-C-A | ** | ||||||||
15364054-CGT-C | 13252174-CGT-C | ** | ||||||||
13567221-C-A | 11411545-C-A | ** | ||||||||
19143125-A-T | 17031245-A-T | 17×T | ** | |||||||
7105161-C-A | 7237120-C-A | ** | ||||||||
10987768-C-G | ** | |||||||||
3345715-C-A | 3477674-C-A | ** | ||||||||
14538708-C-A | 12426909-C-A | ** | ||||||||
9082361-C-A | 9244752-C-A | ** | ||||||||
26563254-G-A | 24417107-G-A | P1_g2 | ** | |||||||
10780590-G-A | ** | |||||||||
10769650-T-C | ** | |||||||||
15684744-C-A | 13572864-C-A | ** | ||||||||
28758118-C-A | 26611971-C-A | ** | ||||||||
28755833-C-A | 26609686-C-A | ** | ||||||||
23742343-C-A | 21580457-C-A | ** | ||||||||
7163153-C-A | 7295112-C-A | ** | ||||||||
10666659-C-A | ** | |||||||||
14912901-C-A | 12800968-C-A | ** | ||||||||
15753250-C-A | 13641370-C-A | ** | ||||||||
15220974-C-A | 13109060-C-A | ** | ||||||||
14366784-C-A | 12246079-C-A | ** | ||||||||
16021338-C-A | 13909458-C-A | ** | ||||||||
18707986-C-A | 16596106-C-A | ** | ||||||||
17580864-C-A | 15468984-C-A | ** | ||||||||
28505176-C-A | 26359029-C-A | ** | ||||||||
10657421-A-G | ** | |||||||||
4449217-C-A | 4581176-C-A | ** | ||||||||
6767774-C-CA | 6899733-C-CA | 8×A | ** | |||||||
21296568-C-A | 19134682-C-A | ** | ||||||||
6926264-C-A | 7058223-C-A | ** | ||||||||
8279956-C-A | 8411915-C-A | ** | ||||||||
2979555-C-A | 3111514-C-A | ** | ||||||||
17676431-C-A | 15564551-C-A | ** | ||||||||
7333140-C-A | 7465099-C-A | ** | ||||||||
14152184-C-A | 12031478-C-A | ** | ||||||||
21515777-G-C | 19353891-G-C | ** | ||||||||
17616792-C-A | 15504912-C-A | ** | ||||||||
26153567-T-TC | 24007420-T-TC | P1_Y1 | ** | |||||||
10667787-A-C | ** | |||||||||
10667791-A-G | ** | |||||||||
6917059-C-A | 7049018-C-A | ** | ||||||||
14459802-C-A | 12339075-C-A | ** | ||||||||
10032226-C-A | 10194617-C-A | ** | ||||||||
13929323-T-C | 11808617-T-C | ** | ||||||||
14757944-C-A | 12646013-C-A | ** | ||||||||
15346949-C-A | 13235068-C-A | ** | ||||||||
9461926-G-T | 9624317-G-T | ** | ||||||||
18050465-C-A | 15938585-C-A | ** | ||||||||
14021518-G-A | 11900812-G-A | Y65777 | ** | |||||||
11016302-C-A | ** | |||||||||
18847935-C-A | 16736055-C-A | ** | ||||||||
28481262-C-A | 26335115-C-A | ** | ||||||||
10653497-T-C | ** | |||||||||
3057024-C-A | 3188983-C-A | ** | ||||||||
22615248-C-A | 20453362-C-A | ** | ||||||||
16505071-C-A | 14393191-C-A | ** | ||||||||
9953336-G-T | 10115727-G-T | ** | ||||||||
14504634-C-A | 12392839-C-A | ** | ||||||||
16410212-C-A | 14298332-C-A | ** | ||||||||
16481106-C-A | 14369226-C-A | ** | ||||||||
7821358-C-A | 7953317-C-A | ** | ||||||||
10813541-C-A | ** | |||||||||
11029304-C-A | ** | |||||||||
23802403-AAG-A | 21640517-AAG-A | ** | ||||||||
26391530-A-T | 24245383-A-T | P1_Y1 | ** | |||||||
7100621-C-A | 7232580-C-A | ** | ||||||||
17567433-C-A | 15455553-C-A | ** | ||||||||
7243190-C-A | 7375149-C-A | ** | ||||||||
3218712-T-A | 3350671-T-A | ** | ||||||||
3304973-C-A | 3436932-C-A | ** | ||||||||
3347011-G-A | 3478970-G-A | ** | ||||||||
3386709-T-C | 3518668-T-C | FT38330 | ** | |||||||
3390046-T-C | 3522005-T-C | ** | ||||||||
3641282-T-A | 3773241-T-A | ** | ||||||||
3650615-G-A | 3782574-G-A | ** | ||||||||
3763528-T-C | 3895487-T-C | ** | ||||||||
3782105-G-T | 3914064-G-T | ** | ||||||||
3817320-C-A | 3949279-C-A | ** | ||||||||
3836362-C-A | 3968321-C-A | ** | ||||||||
3864612-C-A | 3996571-C-A | ** | ||||||||
3881750-A-T | 4013709-A-T | ** | ||||||||
4064086-A-G | 4196045-A-G | ** | ||||||||
4270450-C-A | 4402409-C-A | ** | ||||||||
4408843-C-A | 4540802-C-A | ** | ||||||||
4430419-C-A | 4562378-C-A | ** | ||||||||
4474005-G-T | 4605964-G-T | ** | ||||||||
4920323-A-G | 5052282-A-G | ** | ||||||||
4995579-A-T | 5127538-A-T | ** | ||||||||
5185061-C-A | 5317020-C-A | ** | ||||||||
5270849-A-G | 5402808-A-G | ** | ||||||||
5285587-T-C | 5417546-T-C | ** | ||||||||
5292852-G-A | 5424811-G-A | ** | ||||||||
5424712-C-A | 5556671-C-A | ** | ||||||||
5440099-C-A | 5572058-C-A | ** | ||||||||
5502254-CAAAA-C | 5634213-CAAAA-C | 16×A | ** | |||||||
5537801-A-C | 5669760-A-C | ** | ||||||||
5612070-G-T | 5744029-G-T | ** | ||||||||
5644534-C-A | 5776493-C-A | ** | ||||||||
5838042-A-C | 5970001-A-C | FT136802 | ** | |||||||
5905563-A-G | 6037522-A-G | ** | ||||||||
5926824-G-T | 6058783-G-T | ** | ||||||||
5986372-G-A | 6118331-G-A | ** | ||||||||
6084054-C-T | 6216013-C-T | ** | ||||||||
6357998-C-T | 6489957-C-T | ** | ||||||||
6359154-G-T | 6491113-G-T | ** | ||||||||
6402694-C-T | 6534653-C-T | ** | ||||||||
6451738-T-A | 6583697-T-A | ** | ||||||||
6471433-C-A | 6603392-C-A | ** | ||||||||
6491998-C-A | 6623957-C-A | ** | ||||||||
6646293-C-A | 6778252-C-A | ** | ||||||||
6648455-C-T | 6780414-C-T | ** | ||||||||
6648560-C-T | 6780519-C-T | ** | ||||||||
6747980-G-A | 6879939-G-A | ** | ||||||||
6770772-T-G | 6902731-T-G | ** | ||||||||
6793612-A-T | 6925571-A-T | ** | ||||||||
6793642-C-A | 6925601-C-A | ** | ||||||||
6917503-T-C | 7049462-T-C | ** | ||||||||
6926647-G-T | 7058606-G-T | FGC59148 | ** | |||||||
7081064-A-T | 7213023-A-T | ** | ||||||||
7138461-G-A | 7270420-G-A | ** | ||||||||
7164466-TC-T | 7296425-TC-T | ** | ||||||||
7422910-A-G | 7554869-A-G | ** | ||||||||
7423766-A-G | 7555725-A-G | ** | ||||||||
7436333-C-A | 7568292-C-A | ** | ||||||||
7442083-AT-A | 7574042-AT-A | ** | ||||||||
7829437-A-G | 7961396-A-G | ** | ||||||||
7868082-C-T | 8000041-C-T | ** | ||||||||
8074252-C-A | 8206211-C-A | ** | ||||||||
8078863-A-G | 8210822-A-G | ** | ||||||||
8078974-C-A | 8210933-C-A | ** | ||||||||
8181214-G-TTTT | 8313173-G-TTTT | ** | ||||||||
8290829-T-A | 8422788-T-A | ** | ||||||||
8325329-G-A | 8457288-G-A | ** | ||||||||
8674152-A-C | 8806111-A-C | ** | ||||||||
8698723-C-A | 8830682-C-A | ** | ||||||||
8811380-G-A | 8943339-G-A | ** | ||||||||
8851800-C-T | 8983759-C-T | ** | ||||||||
9427633-G-T | 9590024-G-T | ** | ||||||||
9462087-C-A | 9624478-C-A | ** | ||||||||
9731751-G-A | 9894142-G-A | IR3_Prx | ** | |||||||
9761183-G-A | 9923574-G-A | ** | ||||||||
9937734-C-A | 10100125-C-A | ** | ||||||||
9953314-T-A | 10115705-T-A | ** | ||||||||
10014956-C-A | 10177347-C-A | ** | ||||||||
10040159-A-G | 10202550-A-G | ** | ||||||||
10660312-C-T | ** | |||||||||
10667693-A-T | ** | |||||||||
10667719-T-G | ** | |||||||||
10667727-A-G | ** | |||||||||
10667734-C-T | ** | |||||||||
10667752-C-T | ** | |||||||||
10667757-G-A | ** | |||||||||
10667795-AT-A | ** | |||||||||
10678185-T-C | ** | |||||||||
10689453-C-T | ** | |||||||||
10757969-G-A | ** | |||||||||
10779325-C-A | ** | |||||||||
10794339-G-A | ** | |||||||||
10809018-C-G | ** | |||||||||
10809028-C-G | ** | |||||||||
10809030-T-A | ** | |||||||||
10812522-C-A | ** | |||||||||
10831324-TC-T | ** | |||||||||
10840779-C-A | ** | |||||||||
10851045-C-A | ** | |||||||||
10861632-C-A | ** | |||||||||
10880173-A-G | ** | |||||||||
10911718-GC-G | ** | |||||||||
10930029-C-A | ** | |||||||||
10976975-T-G | ** | |||||||||
10999629-C-A | ** | |||||||||
11003745-C-CTAAAATCCATTCTGT | ** | |||||||||
11022835-C-T | ** | |||||||||
13202502-C-A | 11046826-C-A | ** | ||||||||
13269886-T-C | 11114210-T-C | ** | ||||||||
13280717-A-G | 11125041-A-G | ** | ||||||||
13283270-C-A | 11127594-C-A | ** | ||||||||
13463092-C-A | 11307416-C-A | FT443948 | ** | |||||||
13466504-T-A | 11310828-T-A | ** | ||||||||
13482005-C-A | 11326329-C-A | ** | ||||||||
13490466-C-A | 11334790-C-A | ** | ||||||||
13585335-C-A | 11429659-C-A | ** | ||||||||
13594715-C-A | 11439039-C-A | ** | ||||||||
13725972-A-G | 11570296-A-G | ** | ||||||||
11659025-T-A | ** | |||||||||
11663209-A-T | ** | |||||||||
11671527-A-G | ** | |||||||||
11674396-A-G | ** | |||||||||
13811072-T-A | 11690366-T-A | ** | ||||||||
13925409-A-G | 11804703-A-G | ** | ||||||||
13940816-G-A | 11820110-G-A | ** | ||||||||
13961682-G-A | 11840976-G-A | ** | ||||||||
14031952-G-T | 11911246-G-T | ** | ||||||||
14142979-C-A | 12022273-C-A | ** | ||||||||
14284085-C-A | 12163379-C-A | ** | ||||||||
14324352-A-G | 12203646-A-G | FT138382 | ** | |||||||
14377712-T-C | 12257008-T-C | ** | ||||||||
14379452-A-C | 12258748-A-C | ** | ||||||||
14488586-A-T | 12367855-A-T | ** | ||||||||
14488587-CA-G | 12367856-CA-G | ** | ||||||||
14488614-AAG-T | 12367883-AAG-T | ** | ||||||||
14495735-A-G | 12383932-A-G | ** | ||||||||
14518516-C-A | 12406717-C-A | ** | ||||||||
14518884-T-C | 12407085-T-C | ** | ||||||||
14549161-T-C | 12437362-T-C | ** | ||||||||
14566606-C-A | 12454806-C-A | ** | ||||||||
14569825-T-A | 12458025-T-A | ** | ||||||||
14569829-C-A | 12458029-C-A | ** | ||||||||
14600059-C-A | 12488259-C-A | ** | ||||||||
14661448-C-G | 12549513-C-G | ** | ||||||||
14721623-C-A | 12609691-C-A | ** | ||||||||
14933867-A-G | 12821932-A-G | Y67467 | ** | |||||||
14948839-G-A | 12836913-G-A | ** | ||||||||
15081313-T-C | 12969403-T-C | ** | ||||||||
15151497-T-A | 13039584-T-A | ** | ||||||||
15168381-C-A | 13056467-C-A | ** | ||||||||
15202304-T-A | 13090390-T-A | ** | ||||||||
15239086-A-G | 13127172-A-G | FT21885 | ** | |||||||
15260710-G-TT | 13148794-G-TT | ** | ||||||||
15332255-C-T | 13220373-C-T | ** | ||||||||
15530261-T-A | 13418381-T-A | ** | ||||||||
15533227-A-G | 13421347-A-G | ** | ||||||||
15616657-C-A | 13504777-C-A | ** | ||||||||
15745655-A-G | 13633775-A-G | ** | ||||||||
15756406-C-T | 13644526-C-T | ** | ||||||||
15792906-G-A | 13681026-G-A | ** | ||||||||
15969839-T-C | 13857959-T-C | ** | ||||||||
16058987-A-G | 13947107-A-G | ** | ||||||||
16464662-C-G | 14352782-C-G | ** | ||||||||
16474851-C-A | 14362971-C-A | ** | ||||||||
16485855-T-G | 14373975-T-G | ** | ||||||||
16528337-G-A | 14416457-G-A | ** | ||||||||
16539637-C-A | 14427757-C-A | ** | ||||||||
16581311-C-A | 14469431-C-A | ** | ||||||||
16607762-C-A | 14495882-C-A | ** | ||||||||
16620074-G-T | 14508194-G-T | ** | ||||||||
16640140-C-A | 14528260-C-A | ** | ||||||||
16702324-C-A | 14590444-C-A | ** | ||||||||
16707613-T-A | 14595733-T-A | ** | ||||||||
16932089-C-A | 14820209-C-A | ** | ||||||||
16944772-A-G | 14832892-A-G | ** | ||||||||
17085673-T-C | 14973793-T-C | ** | ||||||||
17095444-G-T | 14983564-G-T | ** | ||||||||
17095604-G-T | 14983724-G-T | ** | ||||||||
17104201-T-C | 14992321-T-C | Y71071 | ** | |||||||
17158967-A-ACT | 15047087-A-ACT | ** | ||||||||
17363269-A-G | 15251389-A-G | ** | ||||||||
17376665-A-T | 15264785-A-T | ** | ||||||||
17428333-T-C | 15316453-T-C | ** | ||||||||
17446801-C-CTTTTT | 15334921-C-CTTTTT | ** | ||||||||
17545918-G-T | 15434038-G-T | ** | ||||||||
17548103-C-A | 15436223-C-A | ** | ||||||||
17634608-C-A | 15522728-C-A | ** | ||||||||
17654867-T-C | 15542987-T-C | ** | ||||||||
17740050-C-A | 15628170-C-A | ** | ||||||||
17788880-C-A | 15677000-C-A | ** | ||||||||
17916464-C-A | 15804584-C-A | ** | ||||||||
18022459-C-A | 15910579-C-A | ** | ||||||||
18071576-C-A | 15959696-C-A | ** | ||||||||
18078022-G-A | 15966142-G-A | BY119776 | ** | |||||||
18263788-G-A | 16151908-G-A | ** | ||||||||
18692643-T-C | 16580763-T-C | ** | ||||||||
18702352-A-G | 16590472-A-G | ** | ||||||||
18791383-C-A | 16679503-C-A | ** | ||||||||
18863122-C-A | 16751242-C-A | ** | ||||||||
18905417-A-C | 16793537-A-C | ** | ||||||||
19067994-A-T | 16956114-A-T | ** | ||||||||
19244695-A-G | 17132815-A-G | ** | ||||||||
19389736-AAAAG-A | 17277856-AAAAG-A | ** | ||||||||
19427638-G-T | 17315758-G-T | ** | ||||||||
19544593-C-A | 17432713-C-A | ** | ||||||||
19853845-C-A | 17741965-C-A | P5_Prx | ** | |||||||
20424813-G-A | 18262927-G-A | P5_Dst | ** | |||||||
20602097-A-G | 18440211-A-G | P5_Dst | ** | |||||||
20815696-G-A | 18653810-G-A | P4_Gap | ** | |||||||
21068344-C-A | 18906458-C-A | ** | ||||||||
21072345-G-A | 18910459-G-A | ** | ||||||||
21116867-C-A | 18954981-C-A | ** | ||||||||
21211217-TG-T | 19049331-TG-T | ** | ||||||||
21278961-C-A | 19117075-C-A | ** | ||||||||
21296680-T-C | 19134794-T-C | ** | ||||||||
21377717-T-C | 19215831-T-C | ** | ||||||||
21381967-T-C | 19220081-T-C | ** | ||||||||
21503128-G-A | 19341242-G-A | ** | ||||||||
21515736-G-C | 19353850-G-C | ** | ||||||||
21515755-T-A | 19353869-T-A | ** | ||||||||
21515765-A-T | 19353879-A-T | ** | ||||||||
21515774-A-T | 19353888-A-T | ** | ||||||||
21515805-G-C | 19353919-G-C | ** | ||||||||
21515818-C-T | 19353932-C-T | ** | ||||||||
21515841-C-T | 19353955-C-T | ** | ||||||||
21836209-C-A | 19674323-C-A | ** | ||||||||
21863892-C-A | 19702006-C-A | ** | ||||||||
21875835-CCA-C | 19713949-CCA-C | ** | ||||||||
22017943-C-A | 19856057-C-A | ** | ||||||||
22055439-A-G | 19893553-A-G | ** | ||||||||
22086062-C-G | 19924176-C-G | ** | ||||||||
22113743-C-A | 19951857-C-A | ** | ||||||||
22189103-A-G | 20027217-A-G | ** | ||||||||
22598743-C-A | 20436857-C-A | ** | ||||||||
22775424-C-A | 20613538-C-A | ** | ||||||||
22776899-C-A | 20615013-C-A | ** | ||||||||
23137497-T-C | 20975611-T-C | ** | ||||||||
23138602-C-A | 20976716-C-A | ** | ||||||||
23143157-C-A | 20981271-C-A | ** | ||||||||
23143169-T-C | 20981283-T-C | ** | ||||||||
23317711-AAC-A | 21155825-AAC-A | ** | ||||||||
23345910-G-A | 21184024-G-A | ** | ||||||||
23425178-C-A | 21263292-C-A | ** | ||||||||
23439898-T-C | 21278012-T-C | ** | ||||||||
23514208-T-A | 21352322-T-A | ** | ||||||||
23564660-T-G | 21402774-T-G | ** | ||||||||
23655434-A-T | 21493548-A-T | ** | ||||||||
23655468-A-C | 21493582-A-C | ** | ||||||||
23655469-G-A | 21493583-G-A | ** | ||||||||
23831448-T-A | 21669562-T-A | ** | ||||||||
23953292-A-G | 21807145-A-G | FTB20984 | ** | |||||||
24389484-G-T | 22243337-G-T | ** | ||||||||
24404044-C-A | 22257897-C-A | ** | ||||||||
24513211-G-A | 22367064-G-A | ** | ||||||||
25889840-TA-T | 23743693-TA-T | P1_Y1 | ** | |||||||
25967686-T-TTG | 23821539-T-TTG | P1_Y1 | ** | |||||||
26133130-T-C | 23986983-T-C | P1_Y1 | ** | |||||||
27616350-T-C | 25470203-T-C | P1_Y2 | ** | |||||||
27616512-G-T | 25470365-G-T | P1_Y2 | ** | |||||||
28465291-C-T | 26319144-C-T | ** | ||||||||
28512425-C-A | 26366278-C-A | ** | ||||||||
28547351-T-C | 26401204-T-C | ** | ||||||||
28548692-C-T | 26402545-C-T | ** | ||||||||
28566276-G-C | 26420129-G-C | ** | ||||||||
28597317-C-T | 26451170-C-T | ** | ||||||||
28605996-C-A | 26459849-C-A | ** | ||||||||
28687959-A-T | 26541812-A-T | ** | ||||||||
28697996-G-A | 26551849-G-A | ** | ||||||||
28727705-A-T | 26581558-A-T | ** | ||||||||
56841925-T-G | ** | |||||||||
56845040-G-T | ** | |||||||||
58983082-C-G | 56836935-C-G | *** | ||||||||
13827112-A-C | 11706406-A-C | *** | ||||||||
10059872-TA-T | 10222263-TA-T | 10×A | *** | |||||||
14168640-TAA-T | 12047934-TAA-T | 12×A | *** | *** | ||||||
18806044-CTTTTT-C | 16694164-CTTTTT-C | 19×T | *** | |||||||
13819656-G-T | 11698950-G-T | *** | ||||||||
7304086-AT-A | 7436045-AT-A | b38:7436045AT>A | 10×T | *** | ||||||
7447452-A-G | 7579411-A-G | IR1_L | *** | |||||||
22249865-G-C | 20087979-G-C | DYZ19 | *** | |||||||
22262434-G-GAA | 20100548-G-GAA | DYZ19 | *** | |||||||
22425092-G-C | 20263206-G-C | DYZ19 | *** | |||||||
22498579-A-T | 20336693-A-T | DYZ19 | *** | |||||||
7608540-TAAA-T | 7740499-TAAA-T | 17×A | *** | |||||||
10885131-C-T | *** | |||||||||
16519316-CAAA-C | 14407436-CAAA-C | 15×A | *** | |||||||
10746944-A-G | *** | |||||||||
15677505-CAAA-C | 13565625-CAAA-C | 16×A | *** | |||||||
23741940-G-T | 21580054-G-T | BY164112 | *** | |||||||
13478241-G-A,C | 11322565-G-A,C | *** | ||||||||
11001447-A-T | *** | |||||||||
11001465-T-G | *** | |||||||||
6953202-TACAC-T,TAC | 7085161-TACAC-T,TAC | 17×AC | *** | |||||||
16913422-CAAAAAA-C | 14801542-CAAAAAA-C | 21×A | *** | |||||||
24417006-AAAAGAAAGAAAG-A,AAAAG | 22270859-AAAAGAAAGAAAG-A,AAAAG | 18×AAAG | *** | |||||||
10796671-C-G | *** | |||||||||
56830286-T-G | *** | |||||||||
28788034-A-T | 26641887-A-T | *** | ||||||||
28788040-A-ATGGAG | 26641893-A-ATGGAG | *** | ||||||||
13446546-A-G | 11290870-A-G | *** | ||||||||
11001438-A-T | *** | |||||||||
10916017-G-T | *** | |||||||||
14960444-G-A | 12848519-G-A | FT281788 | *** | |||||||
16719742-C-A | 14607862-C-A | *** | ||||||||
8085760-A-C | 8217719-A-C | *** | ||||||||
7142010-C-A | 7273969-C-A | *** | ||||||||
16245948-G-T | 14134068-G-T | *** | ||||||||
10746943-C-T | *** | |||||||||
11672608-GA-G | *** | |||||||||
7166815-C-A | 7298774-C-A | *** | ||||||||
14356890-CTTTTTT-C | 12236185-CTTTTTT-C | 17×T | *** | |||||||
10958343-C-A | *** | |||||||||
56752211-G-T | *** | |||||||||
6948123-TGG-T,TTGG | 7080082-TGG-T,TTGG | *** | ||||||||
3074007-GAA-G | 3205966-GAA-G | 13×A | *** | |||||||
15497364-C-A | 13385484-C-A | *** | ||||||||
5586856-G-T | 5718815-G-T | *** | ||||||||
10657315-C-T | *** | |||||||||
10961198-C-T | *** | |||||||||
10961203-C-T | *** | |||||||||
10980752-TCCATT-T,TCCATC | *** | |||||||||
13488582-A-AC | 11332906-A-AC | *** | ||||||||
11656977-T-G | *** | |||||||||
14266305-GTA-G,GTATA | 12145599-GTA-G,GTATA | 14×TA | *** | |||||||
14285947-T-C | 12165241-T-C | *** | ||||||||
16180489-C-A | 14068609-C-A | *** | ||||||||
16342384-G-T | 14230504-G-T | Z33124 AM00660 | *** | |||||||
17951721-C-A | 15839841-C-A | *** | ||||||||
21201035-C-A | 19039149-C-A | *** | ||||||||
22040979-C-A | 19879093-C-A | *** | ||||||||
22649645-C-A | 20487759-C-A | *** | ||||||||
23741960-G-T | 21580074-G-T | *** | ||||||||
27527436-A-T | 25381289-A-T | P1_Y2 | *** | |||||||
56838301-G-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Mutation Notes:
Kit | POSITION-REF-ALT (hg19) | POSITION-REF-ALT (hg38) | Note |
---|---|---|---|
Manual | 15770622-G-T | 13658742-G-T | 1T |