Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > L1335/S530 > L1065 > Z16325 > S744 > S691 > S695 > FGC19633 > FGC32575 > BY11747

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
KGC4Y
9950035-C-T 10112426-C-T FGC50079 Y+
22462348-G-A 20300462-G-A FGC14867 DYZ19 +
6642212-G-A 6774171-G-A FGC50078 Y+
23958703-T-C 21812556-T-C FGC50082 Y+
22686643-TCTAGGG-T 20524757-TCTAGGG-T *
2897248-T-C 3029207-T-C FGC50077 Y*
13345990-A-G 11190314-A-G FGC50080 *
17971368-C-T 15859488-C-T FGC50081 YY*
5235518-C-T 5367477-C-T **
28682338-A-G 26536191-A-G **
4098787-C-T 4230746-C-T **
23095114-G-A 20933228-G-A **
15315461-CA-C 13203566-CAA-C 18×A***
59010483-A-C 56864336-A-C **
24387061-CTA-C 22240914-CTA-C **
3931076-G-A 4063035-G-A **
22841400-T-G 20679514-T-G **
59027751-G-A 56881604-G-A **
59027886-G-A 56881739-G-A **
58855194-A-G 56735677-T-C **
18825629-CAAAAA-C 16713749-CAAAAA-C 20×A**
3540836-C-A 3672795-C-A **
22841383-A-C 20679497-A-C **
6929132-CTTTTTTTTT-C 7061091-CTTTTTTTTT-C 26×T**
18652767-G-T 16540887-G-T **
7438122-T-C 7570081-T-C **
58992073-C-A 56845926-C-A **
4098815-G-A 4230774-G-A **
17794143-CTCTT-C 15682263-CTCTT-C 4×TCTT**
3702819-T-TAC 3834778-T-TAC 16×AC**
5066264-T-C 5198223-T-C **
28162762-G-A 26016615-G-A FGC18656 P1_b4 **
28162759-T-C 26016612-T-C P1_b4 **
15404216-C-A 13292336-C-A **
58991999-C-T 56845852-C-T **
28162780-C-A 26016633-C-A P1_b4 **
5066251-G-T 5198210-G-T **
28544517-C-A 26398370-C-A **
28619147-T-C 26473000-T-C **
22274125-C-A 20112239-C-A DYZ19 ***
22274093-G-A 20112207-G-A DYZ19 ***
25524661-C-A 23378514-C-A P1_gr1 ***
22274092-T-A 20112206-T-A DYZ19 ***
22359969-G-T 20198083-G-T DYZ19 ***
22274081-G-A 20112195-G-A DYZ19 ***
25075340-C-A 22929193-C-A g1 ***
22274114-T-G 20112228-T-G DYZ19 ***
22252510-G-T 20090624-G-T DYZ19 ***
22266137-C-A 20104251-C-A DYZ19 ***
22367580-A-C 20205694-A-C DYZ19 ***
22214699-A-G 20052813-A-G ***
22214698-G-A 20052812-G-A ***
25866752-C-T 23720605-C-T P1_Y1 ***
22214696-G-A 20052810-G-A ***
22214689-A-G 20052803-A-G ***
22214685-G-A 20052799-G-A ***
22059700-C-A 19897814-C-A ***
21965426-T-G 19803540-T-G ***
25877498-G-T 23731351-G-T P1_Y1 ***
22366142-T-C 20204256-T-C DYZ19 ***
23373091-A-G 21211205-A-G ***
24922217-C-G 22776070-C-G g1 ***
24329459-C-T 22183312-C-T P3_t1 ***
23120977-A-G 20959091-A-G ***
23100271-C-T 20938385-C-T ***
23095133-A-T 20933247-A-T ***
23373117-C-A 21211231-C-A ***
23373120-G-A 21211234-G-A ***
23373123-G-C 21211237-G-C ***
23649019-C-T 21487133-C-T ***
23006135-T-A 20844249-T-A ***
22883086-A-T 20721200-A-T ***
22870889-G-A 20709003-G-A ***
22491715-G-T 20329829-G-T DYZ19 ***
22841409-T-G 20679523-T-G ***
24354570-T-C 22208423-T-C P3_t1 ***
24759348-C-T 22613201-C-T P3_b2 ***
24911528-G-A 22765381-G-A g1 ***
24920659-T-C 22774512-T-C g1 ***
22729924-A-G 20568038-A-G ***
24920668-T-C 22774521-T-C g1 ***
23373092-C-T 21211206-C-T ***
22652399-G-A 20490513-G-A ***
22970191-G-A 20808305-G-A ***
23036678-CA-C 20874792-CA-C 21×A***
21950006-G-A 19788120-G-A ***
16909445-G-C 14797565-G-C ***
17617491-T-C 15505611-T-C ***
17482730-C-T 15370850-C-T ***
17323464-T-G 15211584-T-G ***
17300615-T-C 15188735-T-C ***
17300614-A-G 15188734-A-G ***
17146556-A-C 15034676-A-C ***
17056748-A-T 14944868-A-T ***
17006364-G-A 14894484-G-A ***
17006352-C-G 14894472-C-G ***
17006347-A-G 14894467-A-G ***
16997077-A-G 14885197-A-G ***
16997071-G-A 14885191-G-A ***
16909456-C-G 14797576-C-G ***
16909450-G-A 14797570-G-A ***
16909444-G-A 14797564-G-A ***
17617524-C-T 15505644-C-T ***
16628653-T-A 14516773-T-A ***
16383858-A-C 14271978-A-C ***
16383861-T-A 14271981-T-A ***
16402034-G-T 14290154-G-T ***
16480507-A-T 14368627-A-T ***
16560066-T-C 14448186-T-C ***
16605497-T-C 14493617-T-C ***
16648444-T-C 14536564-T-C ***
16909439-C-G 14797559-C-G ***
16658380-G-T 14546500-G-T ***
16658388-G-T 14546508-G-T ***
16726041-T-C 14614161-T-C ***
16909422-G-T 14797542-G-T ***
16909427-A-T 14797547-A-T ***
16909437-T-A 14797557-T-A ***
17617504-T-A 15505624-T-A ***
17617525-A-G 15505645-A-G ***
21805759-T-C 19643873-T-C ***
21078291-T-C 18916405-T-C ***
19878874-C-T 17766994-C-T P5_Prx ***
20458557-G-T 18296671-G-T P5_Dst ***
20612421-A-C 18450535-A-C P4_Prx ***
20958406-T-C 18796520-T-C P4_Dst ***
21072617-A-T 18910731-A-T ***
21078287-G-A 18916401-G-A ***
21322070-A-G 19160184-A-G ***
19332296-C-A 17220416-C-A ***
25878020-G-T 23731873-G-T P1_Y1 ***
21575310-C-A 19413424-C-A ***
21690211-A-G 19528325-A-G ***
21745716-T-C 19583830-T-C Z4673 ***
21805754-C-A 19643868-C-A ***
21805758-T-G 19643872-T-G ***
19422118-T-A 17310238-T-A ***
19325966-G-A 17214086-G-A ***
17617527-A-T 15505647-A-T ***
18462816-A-T 16350936-A-T P6_Dst ***
17617531-A-C 15505651-A-C ***
17617550-C-T 15505670-C-T ***
17617555-C-T 15505675-C-T ***
17822943-G-C 15711063-G-C ***
17822949-G-T 15711069-G-T ***
18390072-A-T 16278192-A-T P6_Gap ***
18562648-G-T 16450768-G-T ***
19209861-G-C 17097981-G-C ***
18801891-T-A 16690011-T-A ***
18819046-G-C 16707166-G-C ***
18876208-A-T 16764328-A-T ***
18892520-G-A 16780640-G-A ***
18980276-C-A 16868396-C-A ***
18980469-T-C 16868589-T-C ***
21322075-T-A 19160189-T-A ***
28162739-G-A 26016592-G-A P1_b4 ***
26494493-G-A 24348346-G-A P1_Y1 ***
5886175-C-CTT 6018134-C-CTT 19×T***
15364059-CAAAA-C 13252179-CAAAA-C 21×A***
14101331-TTTCTTCTTCTTCTCC-T 11980625-TTTCTTCTTCTTCTCC-T ***
13513253-AAT-A 11357577-AAT-A ***
13482103-CA-AC 11326427-CA-AC ***
13482065-AAAA-CAAT 11326389-AAAA-CAAT ***
13468070-TA-CT 11312394-TA-CT ***
13455969-AAG-CAT 11300293-AAG-CAT ***
13449696-CTCCATTCCAT-C 11294020-CTCCATTCCAT-C 11×TCCAT***
9472117-C-CAA 9634508-C-CAA ***
9433779-CA-C 9596170-CA-C ***
9422955-C-CA 9585346-C-CA ***
7174497-CT-C 7306456-CT-C ***
7174490-A-AAT 7306449-A-AAT ***
5261758-CAAAC-AAAAA 5393717-CAAAC-AAAAA ***
15733731-A-AT 13621851-A-AT ***
5066184-CT-C 5198143-CT-C 22×T***
4853215-GTA-G 4985174-GTA-G ***
4654832-C-CAA 4786791-C-CAA 15×A***
4511163-C-CA 4643122-C-CA 26×A***
4189603-CT-TC 4321562-CT-TC ***
3909109-CA-C 4041068-CA-C 22×A***
3720173-ACCCG-CCCCC 3852132-ACCCG-CCCCC ***
3709199-GTT-G 3841158-GTT-G 17×T***
3702852-A-ACT 3834811-A-ACT ***
3640528-TTTCT-CTTCC 3772487-TTTCT-CTTCC ***
3172320-TG-T 3304279-TG-T ***
2759997-TAAA-CAAG 2891956-TAAA-CAAG ***
13140446-AT-TC 10629932-AT-TC ***
15593273-TC-T 13481393-TC-T ***
16352456-CAA-C 14240576-CAA-C 21×A***
9429480-T-TA 9591871-T-TA 18×A***
23373091-AC-GT 21211205-AC-GT ***
59013760-AGT-GTA 56867613-AGT-GTA ***
58985113-AGTGA-GGTGT 56838966-AGTGA-GGTGT ***
58982891-AATTCC-TATTTA 56836744-AATTCC-TATTTA ***
58981560-CTCCA-TTCCC 56835413-CTCCA-TTCCC ***
58980422-C-CTACAT 56834275-C-CTACAT ***
58866779-TTC-CTG 56724090-GAA-CAG ***
58853562-CCATTCCATTCCA-TCATTCCT 56737297-TGGAATGGAATGG-AGGAATGA ***
28500806-CTT-C 26354659-CTT-C 18×T***
28482797-GCTTTGG-ACTT 26336650-GCTTTGG-ACTT ***
28457747-TCA-T 26311600-TCA-T ***
28162797-CT-C 26016650-CT-C P1_b4 ***
28162759-TTTG-CTTA 26016612-TTTG-CTTA P1_b4 ***
25471938-G-GCCTTCCTT 23325791-G-GCCTTCCTT P2_r2 18×CCTT***
23040157-TAAA-T 20878271-TAAA-T 17×A***
16726021-A-AG 14614141-A-AG ***
23006116-ATAGTAGT-GTGGTATC 20844230-ATAGTAGT-GTGGTATC ***
22252506-TTGTG-ATGTT 20090620-TTGTG-ATGTT DYZ19 ***
22252478-GTCT-CTCA 20090592-GTCT-CTCA DYZ19 ***
22252452-AGTGG-GCTGC 20090566-AGTGG-GCTGC DYZ19 ***
22237029-CTCT-GTCA 20075143-CTCT-GTCA DYZ19 ***
22197915-CA-C 20036029-CA-C ***
22185855-CTTTTT-C 20023969-CTTTTT-C 25×T***
21502782-CT-C 19340896-CT-C 16×T***
21274827-GG-CA 19112941-GG-CA ***
21274820-TTA-ATT 19112934-TTA-ATT ***
20865487-GTATA-G 18703601-GTATA-G P4_Dst 9×TA***
17006371-ATGC-CTGA 14894491-ATGC-CTGA ***
16729172-GTTT-G 14617292-GTTT-G 22×T***
22058321-CA-C 19896435-CA-C 11×A***
4021929-TC-T 4153888-TC-T ***
26500002-A-G 24353855-A-G P1_Y1 ***
28477937-C-G 26331790-C-G ***
58854886-T-A 56735985-A-T ***
58854858-C-T 56736013-G-A ***
58850793-C-A 56740078-G-T ***
58836997-G-A 56753874-C-T ***
58834321-T-C 56756550-A-G ***
58834227-C-A 56756644-G-T ***
28696803-G-A 26550656-G-A ***
28696801-A-C 26550654-A-C ***
28696800-G-C 26550653-G-C ***
28625848-T-A 26479701-T-A ***
28620378-G-A 26474231-G-A ***
28620376-A-T 26474229-A-T ***
28482781-T-C 26336634-T-C ***
28356797-G-A 26210650-G-A P1_gr2 ***
58870294-C-T 56720577-G-A ***
28356796-T-C 26210649-T-C P1_gr2 ***
28356792-G-C 26210645-G-C P1_gr2 ***
28356779-G-T 26210632-G-T P1_gr2 ***
16079297-G-C 13967417-G-C ***
28095598-T-G 25949451-T-G P1_Y2 ***
28054639-G-T 25908492-G-T P1_Y2 ***
27964611-T-C 25818464-T-C P1_Y2 ***
26834642-A-C 24688495-A-C P1_g2 ***
26761193-C-T 24615046-C-T P1_g2 ***
26761190-C-T 24615043-C-T P1_g2 ***
26637149-T-C 24491002-T-C P1_g2 ***
26635724-A-T 24489577-A-T P1_g2 ***
26630415-C-T 24484268-C-T P1_g2 ***
58862663-C-G 56728208-G-C ***
58874792-T-C 56716079-A-G ***
4571069-CA-C 4703028-CA-C 13×A***
59011816-T-C 56865669-T-C ***
5400468-CT-C 5532427-CT-C 19×T***
58991999-CG-TC 56845852-CG-TC ***
13365795-AT-A 11210119-AT-A 16×T***
13454807-TAC-CAT 11299131-TAC-CAT ***
17942617-T-TA 15830737-T-TA 14×A***
17432010-C-CT 15320130-C-CT 21×T***
16059028-C-CT 13947148-C-CT 19×T***
4537586-CT-C 4669545-CT-C 21×T***
6451957-GT-G 6583916-GT-G 17×T***
59032147-C-A 56886000-C-A ***
59030289-G-A 56884142-G-A ***
59017524-G-T 56871377-G-T ***
59011838-G-A 56865691-G-A ***
59009532-G-A 56863385-G-A ***
58874799-C-G 56716072-G-C ***
58985209-C-T 56839062-C-T ***
58985157-G-A 56839010-G-A ***
58985156-T-C 56839009-T-C ***
58985152-A-T 56839005-A-T ***
58982961-C-T 56836814-C-T ***
58982951-C-G 56836804-C-G ***
58981527-A-T 56835380-A-T ***
58908692-T-C 56682179-A-G ***
58903131-A-T 56687740-T-A ***
58903113-T-A 56687758-A-T ***
58893745-C-A 56697126-G-T ***
58892504-A-T 56698367-T-A ***
58883327-C-A 56707544-G-T ***
58875036-A-T 56715835-T-A ***
16344942-C-G 14233062-C-G ***
15233778-C-T 13121864-C-T ***
15733739-G-T 13621859-G-T ***
2676309-C-A 2808268-C-A ***
2772369-C-T 2904328-C-T ***
2772348-C-A 2904307-C-A ***
2772341-A-G 2904300-A-G ***
2772340-C-T 2904299-C-T ***
2772324-T-C 2904283-T-C ***
2772322-A-G 2904281-A-G ***
2772314-T-C 2904273-T-C ***
2772310-G-A 2904269-G-A ***
2772309-T-C 2904268-T-C ***
2772303-G-A 2904262-G-A ***
2753059-T-C 2885018-T-C ***
2729970-C-T 2861929-C-T ***
2708757-G-T 2840716-G-T ***
8907434-C-A 9039393-C-A ***
2905868-T-G 3037827-T-G ***
22359923-G-T 20198037-G-T DYZ19 ***
15231027-T-C 13119113-T-C ***
13452080-T-C 11296404-T-C ***
24446980-A-G 22300833-A-G ***
9502518-A-G 9664909-A-G ***
13958488-T-C 11837782-T-C ***
59033031-C-A 56886884-C-A ***
7438104-A-T 7570063-A-T ***
5903799-T-A 6035758-T-A ***
17056747-T-C 14944867-T-C ***
5261767-C-A 5393726-C-A ***
13448836-C-CTCCAT 11293160-C-CTCCAT ***
28492932-AT-A 26346785-AT-A 22×T***
5354792-AT-A 5486751-AT-A 16×T***
2783640-C-A 2915599-C-A ***
2971503-A-G 3103462-A-G ***
22309934-GCAC-TCAT 20148048-GCAC-TCAT DYZ19 ***
4189610-A-T 4321569-A-T ***
4821259-T-C 4953218-T-C ***
4768378-C-A 4900337-C-A ***
4690286-T-C 4822245-T-C ***
4684861-C-T 4816820-C-T ***
4652440-A-G 4784399-A-G ***
4618956-C-T 4750915-C-T ***
4618943-A-T 4750902-A-T ***
4618939-G-C 4750898-G-C ***
4618931-C-G 4750890-C-G ***
4503364-G-A 4635323-G-A ***
4430893-A-G 4562852-A-G ***
4410157-A-G 4542116-A-G ***
4307803-T-A 4439762-T-A ***
4220978-C-A 4352937-C-A ***
4098913-C-G 4230872-C-G ***
2981062-G-A 3113021-G-A ***
4021957-A-G 4153916-A-G ***
4021934-T-C 4153893-T-C ***
4000449-G-A 4132408-G-A ***
3993727-A-G 4125686-A-G ***
3964620-A-G 4096579-A-G ***
3957460-G-A 4089419-G-A ***
3870283-T-C 4002242-T-C ***
3664519-C-A 3796478-C-A ***
3635030-A-G 3766989-A-G ***
3567126-T-C 3699085-T-C ***
3409608-T-C 3541567-T-C ***
3123058-T-C 3255017-T-C ***
3084170-G-T 3216129-G-T ***
3082199-C-A 3214158-C-A ***
7440033-G-A 7571992-G-A ***
22309937-C-T 20148051-C-T DYZ19 ***
4848647-A-G 4980606-A-G ***
13529581-C-A 11373905-C-A ***
13457755-C-T 11302079-C-T ***
13375898-T-C 11220222-T-C ***
13375881-A-G 11220205-A-G ***
13375879-G-A 11220203-G-A ***
20574944-GT-G 18413058-GT-G P5_Dst 19×T***
13701988-A-C 11546312-A-C ***
59018114-T-G 56871967-T-G ***
13140491-TC-CA 10629977-TC-CA ***
14680794-GA-G 12568860-GA-G 15×A***
59027918-G-A 56881771-G-A ***
58834218-G-T 56756653-C-A ***
28539171-G-A 26393024-G-A M9413 ***
17597154-C-T 15485274-C-T 20×T***
13346004-C-T 11190328-C-T ***
13457761-C-A 11302085-C-A ***
13286874-G-A 11131198-G-A ***
13265579-C-CTCTT 11109903-C-CTCTT ***
5862539-CAT-C 5994498-CAT-C ***
5832456-C-T 5964415-C-T ***
5570323-G-A 5702282-G-A ***
5261762-C-A 5393721-C-A ***
5261758-C-A 5393717-C-A ***
5179577-CAT-C 5311536-CAT-C ***
4583052-T-A 4715011-T-A ***
3086544-CA-C 3218503-CA-C 18×A***
5486154-TATATTATA-T 5618113-TATATTATA-T ***
6928535-CT-C 7060494-CT-C 14×T***
14457387-CA-C 12336660-CA-C 18×A***
59010794-T-C 56864647-T-C ***
13457760-C-G 11302084-C-G ***
14101357-T-C 11980651-T-C ***
21700595-GAA-G 19538709-GAA-G 17×A***
17006374-C-A 14894494-C-A ***
8020221-CAA-C 8152180-CAA-C 22×A***
58854819-T-G 56736052-A-C ***
58862295-A-G 56728576-T-C ***
58859115-T-C 56731756-A-G ***
58986545-CTG-TTC 56840398-CTG-TTC ***
58869715-A-C 56721156-T-G ***
58837369-T-C 56753502-A-G ***
17821825-GA-G 15709945-GA-G 17×A***
58870601-A-C 56720270-T-G ***
22237266-C-T 20075380-C-T DYZ19 ***
22237264-T-G 20075378-T-G DYZ19 ***
58910689-CATATT-C 56680176-CAATAT-C ***
58910709-A-T 56680162-T-A ***
58985078-GGGGC-AGGGA 56838931-GGGGC-AGGGA ***
22481555-T-G 20319669-T-G DYZ19 ***
16819978-T-A 14708098-T-A ***
13265370-CGT-AGA 11109694-CGT-AGA ***
19059747-CT-C 16947867-CT-C 25×T***
22341706-G-A 20179820-G-A DYZ19 ***
23350626-C-CT 21188740-C-CT 21×T***
59029429-G-A 56883282-G-A ***
59015193-C-A 56869046-C-A ***
59012205-T-A 56866058-T-A ***
59011846-C-A 56865699-C-A ***
59011789-C-G 56865642-C-G ***
59011687-T-A 56865540-T-A ***
59006023-TTTATA-T 56859876-TTTATA-T ***
28605190-GAAAT-G 26459043-GAAAT-G 6×AAAT***
18075561-C-T 15963681-C-T ***
17300616-A-C 15188736-A-C ***
4821316-G-A 4953275-G-A ***
4848672-G-A 4980631-G-A ***
15674184-G-T 13562304-G-T ***
13458182-A-T 11302506-A-T ***
13958496-A-G 11837790-A-G ***
13958495-C-T 11837789-C-T ***
13958491-G-T 11837785-G-T ***
13958489-G-A 11837783-G-A ***
13924970-C-A 11804264-C-A 20×A***
13924944-T-G 11804238-T-G ***
13731576-C-A 11575900-C-A ***
13708636-A-T 11552960-A-T ***
13701986-C-G 11546310-C-G ***
13468580-A-T 11312904-A-T ***
13468575-G-A 11312899-G-A ***
13468071-A-T 11312395-A-T ***
13468033-G-T 11312357-G-T ***
13455853-C-G 11300177-C-G ***
14031943-G-A 11911237-G-A ***
13452085-T-A 11296409-T-A ***
13371203-G-A 11215527-G-A ***
13371200-A-G 11215524-A-G ***
13351239-A-T 11195563-A-T ***
13276343-C-T 11120667-C-T ***
13236510-G-T 11080834-G-T ***
13110047-C-A 10599533-C-A ***
13110043-G-A 10599529-G-A ***
13110042-G-A 10599528-G-A ***
13110034-C-T 10599520-C-T ***
13110005-G-C 10599491-G-C ***
13110000-T-C 10599486-T-C ***
10044527-G-T 10206918-G-T ***
9959827-G-C 10122218-G-C ***
14025702-G-A 11904996-G-A ***
14075599-G-A 11954893-G-A 38×A***
9912385-C-T 10074776-C-T ***
15186713-C-T 13074799-C-T ***
15499475-A-G 13387595-A-G ***
15492022-T-A 13380142-T-A ***
15410633-C-A 13298753-C-A 28×A***
15276827-C-T 13164916-C-T ***
15245328-A-G 13133414-A-G ***
15245327-C-T 13133413-C-T ***
58833713-T-C 56757158-A-G ***
15231033-G-A 13119119-G-A ***
15231028-G-A 13119114-G-A ***
15212650-G-T 13100736-G-T ***
15208675-A-G 13096761-A-G ***
15186726-A-T 13074812-A-T ***
15186725-G-A 13074811-G-A ***
15186714-A-G 13074800-A-G ***
15092419-G-A 12980508-G-A ***
14099277-A-T 11978571-A-T ***
14819820-T-C 12707887-T-C ***
14819810-A-T 12707877-A-T ***
14819797-G-T 12707864-G-T ***
14819796-T-C 12707863-T-C ***
14760811-G-A 12648880-G-A ***
14748054-G-C 12636123-G-C ***
14748053-C-T 12636122-C-T ***
14748034-G-C 12636103-G-C ***
14696769-T-C 12584835-T-C ***
14505734-C-T 12393939-C-T ***
14365703-A-C 12244998-A-C ***
14341918-T-G 12221213-T-G ***
14213129-A-T 12092423-A-T ***
14128964-C-A 12008258-C-A ***
9959822-C-T 10122213-C-T ***
9912379-G-T 10074770-G-T ***
4976775-T-A 5108734-T-A ***
5643778-A-C 5775737-A-C ***
6177622-C-T 6309581-C-T IR3_Dst ***
6177616-C-T 6309575-C-T IR3_Dst ***
6177614-A-G 6309573-A-G IR3_Dst ***
6177611-C-T 6309570-C-T IR3_Dst ***
6177607-A-G 6309566-A-G IR3_Dst ***
6177606-C-T 6309565-C-T IR3_Dst ***
6163907-C-T 6295866-C-T IR3_Dst ***
6163905-C-T 6295864-C-T IR3_Dst ***
5911688-A-G 6043647-A-G ***
5899333-C-T 6031292-C-T ***
5899332-A-G 6031291-A-G ***
5899327-C-T 6031286-C-T ***
5831688-T-G 5963647-T-G ***
5772816-G-T 5904775-G-T ***
5576662-T-C 5708621-T-C ***
6698981-A-G 6830940-A-G ***
5576643-T-G 5708602-T-G ***
5570465-C-A 5702424-C-A ***
5378096-T-G 5510055-T-G ***
5253219-C-A 5385178-C-A ***
5244148-G-T 5376107-G-T ***
5218558-C-G 5350517-C-G ***
5218554-A-C 5350513-A-C ***
5155625-C-A 5287584-C-A ***
5116241-G-A 5248200-G-A ***
5116235-T-A 5248194-T-A ***
5093986-C-T 5225945-C-T ***
5088928-T-C 5220887-T-C ***
5073441-T-A 5205400-T-A ***
4976782-C-T 5108741-C-T ***
6592404-T-A 6724363-T-A ***
6750437-C-T 6882396-C-T ***
9716445-G-C 9878836-G-C IR3_Prx ***
7725027-T-A 7856986-T-A ***
9716434-A-C 9878825-A-C IR3_Prx ***
9713890-G-A 9876281-G-A IR3_Prx ***
9706925-A-G 9869316-A-G IR3_Prx ***
9702994-G-A 9865385-G-A IR3_Prx ***
9541717-C-A 9704108-C-A IR3_Prx ***
9472120-T-G 9634511-T-G ***
9433764-G-A 9596155-G-A ***
8827257-A-C 8959216-A-C ***
8662518-T-A 8794477-T-A ***
8282642-G-T 8414601-G-T ***
8176651-G-A 8308610-G-A ***
7986045-A-T 8118004-A-T ***
7985313-G-A 8117272-G-A ***
7898822-C-A 8030781-C-A ***
7459164-T-C 7591123-T-C IR1_L ***
6918483-T-C 7050442-T-C ***
7313399-G-A 7445358-G-A ***
7241778-T-A 7373737-T-A ***
7197464-A-G 7329423-A-G ***
7197463-C-T 7329422-C-T ***
7197453-C-G 7329412-C-G ***
7197431-C-A 7329390-C-A ***
7197430-T-C 7329389-T-C ***
7197417-A-T 7329376-A-T ***
7197413-C-G 7329372-C-G ***
7197412-G-T 7329371-G-T ***
7197399-C-T 7329358-C-T 12×T***
7139160-G-T 7271119-G-T ***
7076538-G-A 7208497-G-A ***
6981405-C-T 7113364-C-T ***
59029363-TG-CA 56883216-TG-CA ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: KGC4Y16902656101446268269184
Used in age calculations16902656101446268269184
Counts of SNPs42
Variant counts last updated 2017-12-16 19:34:30.



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