Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > Z195/S355 > Z198 > ZS312 > Z262 > M167 > Z264 > Z205 > ~22224168-A-C > Z206/S235 > Z208/S362 > Z207/S251 > CTS9762 > CTS4299 > FGC48569

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
UEJFD
Manual
Edits
16182235-C-T 14070355-C-T FGC48572 Y+
16756060-G-T 14644180-G-T FGC48573 YY+
18947607-C-T 16835727-C-T FGC48579 YY+
18946032-G-A 16834152-G-A FGC48578 YY+
18884891-C-T 16773011-C-T ZS10291 YY+
18163797-A-T 16051917-A-T FGC48577 YY+
7822740-A-G 7954699-A-G FGC48557 YY+
17491181-T-C 15379301-T-C FGC48576 YY+
17340453-C-T 15228573-C-T FGC48575 YY+
8072809-G-C 8204768-G-C FGC48558 Y+
16829893-G-A 14718013-G-A FGC48574 YY+
8730941-A-G 8862900-A-G FGC48559 YY+
21880880-C-A 19718994-C-A ZS9494 YY+
16044092-T-C 13932212-T-C FGC48571 YY+
15997891-A-G 13886011-A-G FGC48570 YY+
14802558-A-G 12690629-A-G FGC48568 YY+
14356114-G-A 12235409-G-A FGC48567 YY+
14085403-G-A 11964697-G-A FGC48566 YY+
14000441-G-A 11879735-G-A FGC48565 Y+
8776496-T-A 8908455-T-A FGC48560 YY+
13822764-A-T 11702058-A-T FGC48563 +
8821837-T-G 8953796-T-G FGC48561 YY+
9648405-C-T 9810796-C-T FGC48562 IR3_Prx +
19297240-A-G 17185360-A-G FGC48580 Y+
7805264-A-T 7937223-A-T FGC48556 YY+
6082218-G-A 6214177-G-A FGC48550 +
6796585-G-A 6928544-G-A FGC48552 YY+
3730232-G-A 3862191-G-A FGC48547 +
4467650-A-T 4599609-A-T FGC48548 +
3031888-C-A 3163847-C-A FGC48546 +
3025933-A-G 3157892-A-G FGC48545 +
22061001-G-A 19899115-G-A FGC48581 YY+
6787084-C-T 6919043-C-T FGC48551 YY+
24454573-C-G 22308426-C-G FGC48586 Y+
24425432-G-A 22279285-G-A FGC48585 Y+
23594445-C-G 21432559-C-G FGC48584 YY+
6947860-G-A 7079819-G-A FGC48554 YY+
22958722-C-T 20796836-C-T FGC48582 YY+
7678934-T-C 7810893-T-C FGC48555 YY+
3700118-A-T 3832077-A-T FGC34780 +
7899381-G-GC 8031340-G-GC +
13846986-A-C 11726280-A-C FGC48564 *
23465087-C-T 21303201-C-T FGC48583 Y*
5783891-C-A 5915850-C-A FGC48549 *
2888786-G-C 3020745-G-C FGC48544 YY*
13462511-G-A 11306835-G-A **
3604492-A-T 3736451-A-T **
5130732-T-C 5262691-T-C **
6010439-T-G 6142398-T-G **
7712531-T-C 7844490-T-C **
10020809-C-T 10183200-C-T **
59024398-G-GCACACACA 56878251-G-GCACACACA **
13471181-G-T 11315505-G-T **
26179515-G-A 24033368-G-A P1_Y1 **
16533402-AATATATGTATATTATCAATACAT-A 14421522-AATATATGTATATTATCAATACAT-A **
15479144-TA-T 13367264-TA-T **
13856303-A-AAATGGAATGGAATGGAATGGAATGGAATGG 11735597-A-AAATGGAATGGAATGGAATGGAATGGAATGG 15×AATGG**
8218013-T-TTTTCTTTCTTTC 8349972-T-TTTTCTTTCTTTC 15×TTTC**
6984784-TTAAAG-T 7116743-TTAAAG-T **
5180585-T-TATATATATAAGAA 5312544-T-TATATATATAAGAA **
2708411-CGA-C 2840370-CGA-C 23×GA**
4123943-A-AAAGG 4255902-A-AAAGG 8×AAGG**
28784908-A-G 26638761-A-G **
28432356-A-G 26286209-A-G P1_gr2 **
25565712-A-C 23419565-A-C P1_gr1 **
13703712-G-A 11548036-G-A **
23357838-C-T 21195952-C-T **
22779921-G-T 20618035-G-T **
22319298-G-C 20157412-G-C DYZ19 **
21999609-A-G 19837723-A-G **
17618732-C-A 15506852-C-A **
17124740-C-T 15012860-C-T **
59018723-C-G 56872576-C-G **
13923306-G-A 11802600-G-A **
13704529-C-G 11548853-C-G **
13704054-G-T 11548378-G-T **
22467550-G-A 20305664-G-A DYZ19 **
19437788-G-A 17325908-G-A **
22508548-A-G 20346662-A-G DYZ19 **
59010161-A-T 56864014-A-T **
59014835-T-C 56868688-T-C **
5962109-C-CATAT 6094068-C-CATAT 20×AT**
59014673-A-G 56868526-A-G **
59012878-G-A 56866731-G-A **
13474478-C-A 11318802-C-A **
59010319-G-T 56864172-G-T **
59018242-A-T 56872095-A-T **
13566993-T-A 11411317-T-A **
59018676-C-T 56872529-C-T **
59010184-T-C 56864037-T-C **
25497063-A-C 23350916-A-C P2_r2 ***
25717112-G-A 23570965-G-A P1_b3 ***
26243042-C-T 24096895-C-T P1_Y1 ***
22715144-TA-T 20553258-TA-T 23×A***
26123173-G-T 23977026-G-T P1_Y1 ***
26066378-G-T 23920231-G-T P1_Y1 ***
25095575-G-A 22949428-G-A g1 ***
25110687-A-T 22964540-A-T g1 ***
25812328-T-G 23666181-T-G P1_b3 ***
25723698-C-A 23577551-C-A P1_b3 ***
25145692-G-T 22999545-G-T g1 ***
25151745-T-G 23005598-T-G g1 ***
25164770-T-C 23018623-T-C g1 ***
25504479-C-A 23358332-C-A P1_gr1 ***
25688011-C-A 23541864-C-A P1_b3 ***
25604484-G-T 23458337-G-T P1_gr1 ***
22217976-A-T 20056090-A-T DYZ19 ***
25505182-G-A 23359035-G-A P1_gr1 ***
25182094-T-C 23035947-T-C g1 10×A***
26248180-C-T 24102033-C-T P1_Y1 ***
25245805-T-A 23099658-T-A P2_r1 ***
25505148-T-G 23359001-T-G P1_gr1 ***
25246490-A-T 23100343-A-T P2_r1 ***
25334990-A-G 23188843-A-G P2_r1 ***
25379519-G-A 23233372-G-A P2_r2 ***
13447563-CCATT-GCATG 11291887-CCATT-GCATG ***
26387090-G-A 24240943-G-A P1_Y1 ***
26344481-C-A 24198334-C-A P1_Y1 ***
27534695-C-A 25388548-C-A P1_Y2 ***
28263286-T-G 26117139-T-G P1_b4 ***
28239179-A-C 26093032-A-C P1_b4 ***
28237259-T-C 26091112-T-C P1_b4 ***
28123042-T-C 25976895-T-C P1_b4 ***
28122260-C-T 25976113-C-T P1_b4 ***
28022815-G-T 25876668-G-T P1_Y2 ***
28022788-C-G 25876641-C-G P1_Y2 ***
27860436-A-T 25714289-A-T P1_Y2 ***
27760265-A-C 25614118-A-C P1_Y2 ***
27714138-T-C 25567991-T-C P1_Y2 ***
27635842-C-T 25489695-C-T P1_Y2 ***
27633230-G-A 25487083-G-A P1_Y2 ***
27596138-G-A 25449991-G-A P1_Y2 ***
27505494-A-G 25359347-A-G P1_Y2 ***
26344563-G-T 24198416-G-T P1_Y1 ***
27332399-A-C 25186252-A-C P1_g3 ***
27328936-C-T 25182789-C-T P1_g3 ***
26971125-G-T 24824978-G-T P1_r4 ***
26736221-T-G 24590074-T-G P1_g2 ***
26733714-T-C 24587567-T-C P1_g2 ***
26671228-G-C 24525081-G-C P1_g2 ***
26632171-G-A 24486024-G-A P1_g2 ***
26597389-A-T 24451242-A-T P1_g2 ***
26552816-T-C 24406669-T-C P1_g2 ***
26516776-G-T 24370629-G-T P1_Y1 ***
26467782-T-A 24321635-T-A P1_Y1 ***
26419782-A-G 24273635-A-G P1_Y1 ***
25008407-G-T 22862260-G-T g1 ***
26358373-T-C 24212226-T-C P1_Y1 ***
25042845-T-C 22896698-T-C g1 ***
24932432-G-A 22786285-G-A g1 ***
24972279-A-T 22826132-A-T g1 ***
22484062-T-C 20322176-T-C DYZ19 ***
22471767-A-C 20309881-A-C ZS9982 DYZ19 ***
22854132-A-C 20692246-A-C ***
22854116-C-T 20692230-C-T ***
22838861-C-T 20676975-C-T ***
20500942-GA-G 18339056-GA-G P5_Dst 15×A***
22778554-G-T 20616668-G-T ***
22713427-T-G 20551541-T-G ***
22666189-G-A 20504303-G-A ***
22544675-G-T 20382789-G-T ***
22509286-G-T 20347400-G-T DYZ19 ***
22487512-G-A 20325626-G-A DYZ19 ***
22486780-C-A 20324894-C-A DYZ19 ***
22486637-T-A 20324751-T-A DYZ19 ***
22485365-G-A 20323479-G-A DYZ19 ***
22476654-A-C 20314768-A-C DYZ19 ***
23106439-C-A 20944553-C-A ***
22472822-G-C 20310936-G-C DYZ19 ***
22472804-G-C 20310918-G-C DYZ19 ***
22471310-T-C 20309424-T-C DYZ19 ***
22466220-A-C 20304334-A-C DYZ19 ***
22459949-A-T 20298063-A-T DYZ19 ***
22429333-G-C 20267447-G-C DYZ19 ***
22429248-A-C 20267362-A-C DYZ19 ***
22429245-A-G 20267359-A-G DYZ19 ***
22427221-G-A 20265335-G-A DYZ19 ***
22348398-C-A 20186512-C-A DYZ19 ***
22325289-A-T 20163403-A-T DYZ19 ***
22325277-G-A 20163391-G-A DYZ19 ***
4192995-G-T 4324954-G-T ***
22316796-T-C 20154910-T-C DYZ19 ***
22982378-A-G 20820492-A-G ***
23107643-C-T 20945757-C-T ***
24972268-T-G 22826121-T-G g1 ***
26433572-C-T 24287425-C-T P1_Y1 19×T***
8125062-GAGAGA-G 8257021-GAGAGA-G 12×AGAGA***
24870268-T-A 22724121-T-A P3_b2 ***
24768253-C-G 22622106-C-G P3_b2 ***
24750549-C-T 22604402-C-T P3_b2 ***
24745583-T-G 22599436-T-G P3_b2 ***
24707133-A-T 22560986-A-T P3_b2 ***
24671539-G-A 22525392-G-A P3_b2 ***
24658631-G-C 22512484-G-C P3_b2 ***
24658578-A-T 22512431-A-T P3_b2 ***
24652302-A-G 22506155-A-G P3_b2 ***
24588727-T-G 22442580-T-G P3_t2 ***
24491226-G-A 22345079-G-A ***
24486092-A-T 22339945-A-T ***
25246592-A-T 23100445-A-T P2_r1 ***
24341393-A-G 22195246-A-G P3_t1 ***
59021246-G-A 56875099-G-A ***
24332016-T-G 22185869-T-G P3_t1 ***
24204995-A-T 22058848-A-T P3_b1 ***
24181989-C-T 22035842-C-T P3_b1 ***
24171268-A-C 22025121-A-C P3_b1 ***
24171248-C-T 22025101-C-T P3_b1 ***
24150032-C-T 22003885-C-T P3_b1 ***
24121238-T-A 21975091-T-A P3_b1 ***
24081735-C-A 21935588-C-A P3_b1 ***
24045434-C-A 21899287-C-A ***
24044497-T-C 21898350-T-C ***
23728463-C-T 21566577-C-T ***
23601649-T-C 21439763-T-C ***
13451158-CACTCT-C 11295482-CACTCT-C ***
23425272-A-G 21263386-A-G ***
28333098-C-A 26186951-C-A P1_b4 ***
4973668-CA-C 5105627-CA-C 19×A***
28753590-C-A 26607443-C-A ***
15140891-CT-C 13028978-CT-C 11×T***
21992963-TAAAAAAA-T 19831077-TAAAAAAA-T 23×A***
21033701-AAC-A 18871815-AAC-A ***
20655022-ATGTGTGTGTGTGTGTGTGTG-A 18493136-ATGTGTGTGTGTGTGTGTGTG-A P4_Prx 23×TG***
19042178-GCAA-G 16930298-GCAA-G ***
18395723-T-TTA 16283843-T-TTA P6_Gap 27×TA***
17794260-C-CTTTT 15682380-C-CTTTT ***
17474932-A-AT 15363052-A-AT 12×T***
16767153-CTTTTT-C 14655273-CTTTTT-C 17×T***
22237713-C-T 20075827-C-T DYZ19 ***
16506766-CAAAAAA-C 14394886-CAAAAAA-C 19×A***
16336897-G-GT 14225017-G-GT 23×T***
15839959-TAAAAAA-T 13728079-TAAAAAA-T 17×A***
22237714-T-A 20075828-T-A DYZ19 ***
15336019-CA-C 13224137-CA-C 30×A***
15015255-CTTTTTT-C 12903343-CTTTTTTT-C 24×T***
22237712-ACT-GTA 20075826-ACT-GTA DYZ19 ***
14888076-C-CTT 12776142-C-CTT 17×T***
14496317-A-ATGGATGGG 12384522-A-ATGGATGGG ***
14418160-A-ATCTG ***
14379586-G-GATAA 12258882-G-GATAA ***
13869351-AATG-GATA 11748645-AATG-GATA ***
13869280-GAAT-AAAA 11748574-GAAT-AAAA ***
13856306-T-TGGAATGGAATGGAATGGAATGGAATGGAAA 11735600-T-TGGAATGGAATGGAATGGAATGGAATGGAAA ***
22486220-A-T 20324334-A-T DYZ19 ***
13845541-A-AAATGGAATGGAATGGAATGGAATGGAATGGAACGG 11724835-A-AAATGGAATGGAATGGAATGGAATGGAATGGAACGG 8×AATGG***
13725468-TGGAAT-AGAAAA 11569792-TGGAAT-AGAAAA ***
13725450-GAATGG-AAAAGA 11569774-GAATGG-AAAAGA ***
13707161-GGT-TGC 11551485-GGT-TGC ***
13705322-CATGT-AATGG 11549646-CATGT-AATGG ***
13688222-GCATGGAATGGAATGC-G 11532546-GCATGGAATGGAATGC-G ***
22229325-CT-GC 20067439-CT-GC DYZ19 ***
22237724-AGCTTT-CACGTC 20075838-AGCTTT-CACGTC DYZ19 ***
13468177-ACCC-CCCT 11312501-ACCC-CCCT ***
58979237-ATA-TTT 56833090-ATA-TTT ***
58994916-AATTTTGACAAATC-TATAGTGAAATATA 56848769-AATTTTGACAAATC-TATAGTGAAATATA ***
58983160-CTCCACT-ATCCGC 56837013-CTCCACT-ATCCGC ***
58982953-GTC-CTT 56836806-GTC-CTT ***
58982890-AA-CC 56836743-AA-CC ***
58982873-TTGCATTCTAC-T 56836726-TTGCATTCTAC-T ***
58982847-AGCTCA-CGTTCC 56836700-AGCTCA-CGTTCC ***
58982812-CTGTCACCAA-TTGAAACCCT 56836665-CTGTCACCAA-TTGAAACCCT ***
58982794-TTTAG-CCTCA 56836647-TTTAG-CCTCA ***
58982783-CC-AA 56836636-CC-AA ***
58982060-CCACTCAA-TCCCTCCG 56835913-CCACTCAA-TCCCTCCG ***
58980604-CCATTCCCTTCCATTA-C 56834457-CCATTCCCTTCCATTA-C ***
58979942-GGCAC-AGCA 56833795-GGCAC-AGCA ***
58979924-CCCAG-ACCAT 56833777-CCCAG-ACCAT ***
58979422-C-CCACCA 56833275-C-CCACCA ***
58979225-TTCTA-CTGCT 56833078-TTCTA-CTGCT ***
22241711-AA-CC 20079825-AA-CC DYZ19 ***
58905373-GTCGA-TTCGG 56685494-TCGAC-CCGAA ***
22427184-ATGAATGATGC-CTTAAAGTTGT 20265298-ATGAATGATGC-CTTAAAGTTGT DYZ19 ***
22429245-AGTA-GGTC 20267359-AGTA-GGTC DYZ19 ***
22477922-CTGTT-ATGGG 20316036-CTGTT-ATGGG DYZ19 ***
27127598-TTTTATTTCTTTCTTTC-T 24981451-TTTTATTTCTTTCTTTC-T P1_g3 ***
27423515-G-GTATATATATA 25277368-G-GTATATATATA P1_g3 24×TA***
58884052-ACG-TCA 56706817-CGT-TGA ***
58975804-A-AAGC 56829657-A-AAGC ***
58979209-GTTC-ATTA 56833062-GTTC-ATTA ***
58975807-GCACT-AC 56829660-GCACT-AC ***
58975853-CAATCCAC-TACTTCTG 56829706-CAATCCAC-TACTTCTG ***
58975873-AT-CA 56829726-AT-CA ***
58979141-ACTCTGTCAC-TCTGCGTCAA 56832994-ACTCTGTCAC-TCTGCGTCAA ***
58979155-GCTGG-TCGGA 56833008-GCTGG-TCGGA ***
58979167-TAT-AGG 56833020-TAT-AGG ***
13486814-TGG-ACA 11331138-TGG-ACA ***
13466380-CAGAG-TAGAT 11310704-CAGAG-TAGAT ***
22307548-C-G 20145662-C-G DYZ19 ***
58980061-C-G 56833914-C-G ***
58983172-C-T 56837025-C-T ***
58982908-C-A 56836761-C-A ***
58982849-C-T 56836702-C-T ***
58982847-A-C 56836700-A-C ***
58982816-C-A 56836669-C-A ***
58982815-T-A 56836668-T-A ***
58982812-C-T 56836665-C-T ***
58982798-G-A 56836651-G-A ***
58982795-T-C 56836648-T-C ***
58982784-C-A 56836637-C-A ***
58982783-C-A 56836636-C-A ***
58982074-T-G 56835927-T-G ***
58981825-C-T 56835678-C-T ***
58980076-C-T 56833929-C-T ***
58979942-G-C 56833795-G-C ***
59011964-G-T 56865817-G-T ***
58910312-C-T 56680559-G-A ***
58875274-C-T 56715597-G-A ***
58875324-C-A 56715547-G-T ***
58884052-A-T 56706819-T-A ***
58905117-A-T 56685754-T-A ***
58905467-A-T 56685404-T-A ***
58908349-C-G 56682522-G-C ***
58910335-T-G 56680536-A-C ***
58979904-G-C 56833757-G-C ***
58910401-T-C 56680470-A-G ***
58975798-C-A 56829651-C-A ***
58979159-G-A 56833012-G-A ***
58979399-A-T 56833252-A-T ***
58979878-T-G 56833731-T-G ***
58979879-G-A 56833732-G-A ***
59007576-T-A 56861429-T-A ***
59021457-G-T 56875310-G-T ***
13466351-CAA-C 11310675-CAA-C ***
7723948-CTT-C 7855907-CTT-C 25×T***
13466300-GGT-CGG 11310624-GGT-CGG ***
13457992-GTTCCGTTC-CTTTTGTAA 11302316-GTTCCGTTC-CTTTTGTAA ***
13457985-CCG-GCA 11302309-CCG-GCA ***
13453816-TCCA-CCCT 11298140-TCCA-CCCT ***
13450367-CCCATTT-GCCTTTC 11294691-CCCATTT-GCCTTTC ***
13448766-CC-TT 11293090-CC-TT ***
13446801-CGTGCCATTCCATTCCATTCCATT-TTTG 11291125-CGTGCCATTCCATTCCATTCCATT-TTTG ***
13446672-C-CTCCAT 11290996-C-CTCCAT 5×TCCAT***
13196193-AAA-CAT 11040517-AAA-CAT ***
9854343-CTTTTTTTT-C 10016734-CTTTTTTTT-C 19×T***
9218522-TTGTGTGTG-T 9380913-TTGTGTGTG-T 12×TG***
13489770-G-A 11334094-G-A ***
8057169-G-GTA 8189128-G-GTA 12×TA***
19720732-TG-T 17608852-TG-T P5_Prx ***
58979877-C-T 56833730-C-T ***
59013608-GTATA-G 56867461-GTATA-G 15×TA***
19045010-T-TA 16933130-T-TA 16×A***
13725379-A-T 11569703-A-T ***
4618500-C-CA 4750459-C-CA 13×A***
16598677-GA-G 14486797-GA-G 19×A***
16364058-CTATATATATATA-C 14252178-CTATATATATATA-C 27×TA***
8020219-AG-A 8152178-AG-A ***
14986616-TTCTCTC-T 12874684-TTCTCTC-T 17×TC***
58844610-C-G 56746261-G-C ***
6493953-CAAAAAA-C 6625912-CAAAAAA-C 19×A***
2950256-TATATATATATCACATATATACATATATAAGTATATATATGGC-T 3082215-TATATATATATCACATATATACATATATAAGTATATATATGGC-T ***
3539405-ACTT-A 3671364-ACTT-A ***
13263371-CAGC-TAGG 11107695-CAGC-TAGG ***
5792832-G-GA 5924791-G-GA ***
6286970-CACACAA-C 6418929-CACACAA-C IR3_Dst ***
6347776-A-AGGAAGGAAGGAG 6479735-A-AGGAAGGAAGGAG ***
22313689-G-T 20151803-G-T DYZ19 ***
22266638-G-A 20104752-G-A DYZ19 ***
22300704-T-G 20138818-T-G DYZ19 ***
9408944-G-T 9571335-G-T ***
9922767-A-G 10085158-A-G ***
9723357-T-C 9885748-T-C IR3_Prx ***
9677751-A-G 9840142-A-G IR3_Prx ***
9677727-C-T 9840118-C-T IR3_Prx ***
9677723-G-T 9840114-G-T IR3_Prx ***
9677714-A-G 9840105-A-G IR3_Prx ***
9677713-T-C 9840104-T-C IR3_Prx ***
3428687-GAT-G 3560646-GAT-G 22×AT***
9611141-G-T 9773532-G-T IR3_Prx ***
9605823-G-T 9768214-G-T IR3_Prx ***
9559820-C-A 9722211-C-A IR3_Prx ***
9501351-A-T 9663742-A-T ***
9410746-C-T 9573137-C-T ***
9322593-G-T 9484984-G-T ***
9990351-G-A 10152742-G-A ***
9238701-C-T 9401092-C-T ***
9199416-G-A 9361807-G-A ***
9199230-C-T 9361621-C-T ***
9199228-C-T 9361619-C-T ***
9191214-G-A 9353605-G-A ***
7545013-G-GC 7676972-G-GC ***
22226046-G-A 20064160-G-A DYZ19 ***
58985050-T-C 56838903-T-C ***
8724229-T-A 8856188-T-A ***
58985056-TCTTG-CCTTC 56838909-TCTTG-CCTTC ***
13486740-CATT-TATC 11331064-CATT-TATC ***
28442556-C-A 26296409-C-A P1_gr2 16×A***
7712898-A-G 7844857-A-G ***
59002250-CAAA-C 56856103-CAAA-C 14×A***
9990302-C-T 10152693-C-T ***
28022799-T-G 25876652-T-G P1_Y2 ***
7275391-G-T 7407350-G-T ***
15070614-CAAAAAA-C 12958705-CAAAAAA-C 20×A***
13489571-G-A 11333895-G-A ***
13489546-C-T 11333870-C-T ***
13489488-G-C 11333812-G-C ***
13481631-G-C 11325955-G-C ***
13480546-T-G 11324870-T-G ***
13471792-C-T 11316116-C-T ***
24910853-C-CATATAT 22764706-C-CATATAT g1 26×AT***
13468180-C-T 11312504-C-T ***
13468161-G-A 11312485-G-A ***
13466380-C-T 11310704-C-T ***
13466356-G-C 11310680-G-C ***
13466325-C-A 11310649-C-A ***
13466300-G-C 11310624-G-C ***
13463346-T-G 11307670-T-G ***
13461019-A-G 11305343-A-G ***
10032342-A-T 10194733-A-T ***
13460640-G-T 11304964-G-T ***
13460619-G-C 11304943-G-C ***
13460568-G-A 11304892-G-A ***
13458770-C-G 11303094-C-G ***
13458000-C-A 11302324-C-A ***
13457999-T-A 11302323-T-A ***
13457995-C-T 11302319-C-T ***
13457992-G-C 11302316-G-C ***
13457985-C-G 11302309-C-G ***
13453816-T-C 11298140-T-C ***
13451239-T-A 11295563-T-A ***
13222056-A-G 11066380-A-G ***
10094226-C-T 10256617-C-T ***
10046303-A-G 10208694-A-G ***
58912787-G-A 56678084-C-T ***
7016168-A-T 7148127-A-T ***
13489745-T-G 11334069-T-G ***
13340514-A-G 11184838-A-G ***
4117965-A-G 4249924-A-G ***
22471309-C-A 20309423-C-A DYZ19 ***
3543112-A-T 3675071-A-T ***
3334269-C-A 3466228-C-A ***
22473088-A-C 20311202-A-C DYZ19 ***
58985056-T-C 56838909-T-C ***
2775105-A-C 2907064-A-C ***
2758810-T-A 2890769-T-A ***
2670648-T-C 2802607-T-C ***
9922776-T-A 10085167-T-A ***
13486708-T-A 11331032-T-A ***
5963813-C-T 6095772-C-T ***
13340513-C-A 11184837-C-A ***
22237747-T-G 20075861-T-G DYZ19 ***
4192819-C-A 4324778-C-A ***
22307194-T-G 20145308-T-G DYZ19 ***
13466384-G-T 11310708-G-T ***
22429300-G-C 20267414-G-C DYZ19 ***
9204506-C-G 9366897-C-G ***
22486304-T-G 20324418-T-G DYZ19 ***
58979873-T-C 56833726-T-C ***
58996610-G-C 56850463-G-C ***
22713715-A-C 20551829-A-C ***
58979924-C-A 56833777-C-A ***
25505177-A-G 23359030-A-G P1_gr1 ***
26354179-T-G 24208032-T-G P1_Y1 ***
22487503-T-G 20325617-T-G DYZ19 ***
22285981-G-T 20124095-G-T DYZ19 ***
28795712-A-AG 26649565-A-AG ***
4123492-A-G 4255451-A-G ***
4269183-G-T 4401142-G-T ***
13468278-A-C 11312602-A-C ***
6194766-A-G 6326725-A-G IR3_Dst ***
6808208-C-G 6940167-C-G ***
17086602-C-CAT 14974722-C-CAT 22×AT***
13489607-G-A 11333931-G-A ***
6637919-G-T 6769878-G-T ***
6392526-T-A 6524485-T-A ***
6341242-G-A 6473201-G-A IR3_Dst ***
6337125-C-T 6469084-C-T IR3_Dst ***
6335917-C-T 6467876-C-T IR3_Dst ***
6311784-G-A 6443743-G-A IR3_Dst ***
6309448-G-A 6441407-G-A IR3_Dst ***
6296769-T-G 6428728-T-G IR3_Dst ***
6296709-T-A 6428668-T-A IR3_Dst ***
6260518-A-G 6392477-A-G IR3_Dst ***
6214118-T-A 6346077-T-A IR3_Dst ***
6170721-A-T 6302680-A-T IR3_Dst ***
15157856-GTC-G 13045943-GTC-G ***
6157432-T-C 6289391-T-C IR3_Dst ***
6106033-C-G 6237992-C-G ***
15037755-A-AGG 12925845-A-AGG ***
26539507-T-A 24393360-T-A P1_g2 ***
13466403-G-T 11310727-G-T ***
5624213-T-A 5756172-T-A ***
5255003-C-T 5386962-C-T ***
5254914-C-T 5386873-C-T ***
5254911-A-T 5386870-A-T ***
13466413-C-A 11310737-C-A ***
5088717-G-T 5220676-G-T ***
4949452-T-A 5081411-T-A ***
4841787-A-C 4973746-A-C ***
4727528-A-C 4859487-A-C ***
13489728-T-A 11334052-T-A ***
13489746-C-T 11334070-C-T ***
22292767-C-T 20130881-C-T DYZ19 ***
22255778-T-C 20093892-T-C DYZ19 ***
20104892-T-C 17993012-T-C P5_Dst ***
20023571-T-C 17911691-T-C P5_Prx ***
19848189-T-A 17736309-T-A P5_Prx ***
19829345-T-C 17717465-T-C P5_Prx ***
19829341-A-C 17717461-A-C P5_Prx ***
19759541-T-C 17647661-T-C P5_Prx ***
19604770-G-A 17492890-G-A P5_Prx ***
19554801-T-G 17442921-T-G ***
22237712-A-G 20075826-A-G DYZ19 ***
19428801-T-C 17316921-T-C ***
19325622-A-G 17213742-A-G ***
16210731-T-A 14098851-T-A ***
19019300-T-C 16907420-T-C ***
22479109-G-C 20317223-G-C DYZ19 ***
20212643-T-C 18050757-T-C P5_Dst ***
18932191-T-C 16820311-T-C ***
22509170-C-T 20347284-C-T DYZ19 ***
18702890-G-T 16591010-G-T ***
18647638-G-T 16535758-G-T ***
18577612-T-A 16465732-T-A ***
18518347-G-T 16406467-G-T P6_Dst ***
18518322-A-T 16406442-A-T P6_Dst ***
18468873-G-T 16356993-G-T P6_Dst ***
18454807-G-T 16342927-G-T P6_Dst ***
18366926-G-A 16255046-G-A P6_Prx ***
18317417-G-T 16205537-G-T P6_Prx ***
18307645-A-C 16195765-A-C P6_Prx ***
22509228-T-A 20347342-T-A DYZ19 ***
18058654-C-A 15946774-C-A ***
20105820-C-T 17993940-C-T P5_Dst ***
20420167-G-T 18258281-G-T P5_Dst ***
17849041-A-G 15737161-A-G ***
9824984-TAC-T 9987375-TAC-T 9×AC***
22286278-C-T 20124392-C-T DYZ19 ***
22276850-G-T 20114964-G-T DYZ19 ***
22276845-T-C 20114959-T-C DYZ19 ***
22267869-T-C 20105983-T-C DYZ19 ***
13447596-TTGC-CTGT 11291920-TTGC-CTGT ***
22241699-T-A 20079813-T-A DYZ19 ***
22237727-T-G 20075841-T-G DYZ19 ***
22237725-G-A 20075839-G-A DYZ19 ***
22237724-A-C 20075838-A-C DYZ19 ***
22227639-A-T 20065753-A-T DYZ19 ***
22226121-G-A 20064235-G-A DYZ19 ***
22224606-C-T 20062720-C-T DYZ19 ***
22218807-C-T 20056921-C-T DYZ19 ***
22217954-C-T 20056068-C-T DYZ19 ***
13705832-T-C 11550156-T-C ***
20455191-C-T 18293305-C-T P5_Dst ***
21708722-A-G 19546836-A-G ***
21708720-C-T 19546834-C-T ***
21630136-T-C 19468250-T-C ***
21475222-T-G 19313336-T-G ***
21475130-A-T 19313244-A-T ***
21416856-T-C 19254970-T-C ***
21328792-C-A 19166906-C-A ***
21325534-A-G 19163648-A-G ***
21120164-A-G 18958278-A-G ***
20985694-T-G 18823808-T-G P4_Dst ***
20875262-C-A 18713376-C-A P4_Dst ***
20748260-A-G 18586374-A-G P4_Prx ***
20632354-G-T 18470468-G-T P4_Prx ***
20604302-T-A 18442416-T-A P5_Dst ***
17849042-C-T 15737162-C-T ***
17849024-A-C 15737144-A-C ***
13489752-C-A 11334076-C-A ***
13737578-G-C 11581902-G-C ***
14721731-C-T 12609799-C-T ***
14625934-G-T ***
14610519-T-C 12498721-T-C ***
59017244-C-T 56871097-C-T ***
14292275-C-T 12171569-C-T ***
14181001-T-G 12060295-T-G ***
14180569-A-T 12059863-A-T ***
14118676-T-A 11997970-T-A ***
59017324-A-T 56871177-A-T ***
59017328-A-G 56871181-A-G ***
13971500-A-G 11850794-A-G ***
13878164-A-C 11757458-A-C ***
59021219-T-G 56875072-T-G ***
13742829-T-G 11587153-T-G ***
13728050-G-A 11572374-G-A ***
15098442-A-C 12986530-A-C ***
13725501-A-T 11569825-A-T ***
13725421-A-C 11569745-A-C ***
13706187-G-A 11550511-G-A ***
13706154-G-A 11550478-G-A ***
13706104-G-A 11550428-G-A ***
13705276-G-A 11549600-G-A ***
13733865-AC-TG 11578189-AC-TG ***
13704446-A-G 11548770-A-G ***
13489555-C-A 11333879-C-A ***
13471806-AC-GT 11316130-AC-GT ***
13699555-C-G 11543879-C-G ***
13697790-C-A 11542114-C-A ***
13611435-C-T 11455759-C-T ***
13599383-A-G 11443707-A-G ***
14986598-C-A 12874666-C-A ***
15103253-A-C 12991341-A-C ***
17849013-G-A 15737133-G-A ***
17153864-A-C 15041984-A-C ***
17849000-C-T 15737120-C-T ***
17825918-G-T 15714038-G-T ***
17824338-C-A 15712458-C-A ***
17728478-G-A 15616598-G-A ***
17628057-T-A 15516177-T-A ***
58866388-C-T 56724483-G-A ***
17545673-G-T 15433793-G-T ***
17523567-G-A 15411687-G-A ***
58980522-CTCTAT-C 56834375-CTCTAT-C ***
17483335-G-A 15371455-G-A ***
59007631-C-T 56861484-C-T ***
17270479-T-C 15158599-T-C ***
17270224-G-T 15158344-G-T ***
17258428-G-A 15146548-G-A ***
17002716-G-C 14890836-G-C ***
15119301-G-T 13007388-G-T ***
16729244-A-T 14617364-A-T ***
16710227-A-G 14598347-A-G ***
16709566-C-A 14597686-C-A ***
16540913-C-A 14429033-C-A ***
16540343-C-T 14428463-C-T ***
59014682-AAT-A 56868535-AAT-A ***
15922990-A-C 13811110-A-C ***
15922019-G-A 13810139-G-A ***
15891202-T-A 13779322-T-A ***
15858116-G-T 13746236-G-T ***
15498017-G-T 13386137-G-T ***
15479146-T-C 13367266-T-C ***
15291077-G-A 13179176-G-A ***
15242742-C-A 13130828-C-A ***
22446152-A-T 20284266-A-T Z18134Z18135 DYZ19 ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Mutation Notes:

Kit POSITION-REF-ALT (hg19) POSITION-REF-ALT (hg38) Note
Manual8739154-A-AAAT20 reads cover the necessary region. The hg19 reference sequence has 13 copies of AAT. The BAM file has 2 reads with 12 copies, 3 reads with 13 copies, 13 reads with 14 copies and 2 reads with 15 copies.

Haplotype Progression

The data below reveals the progression of changes in the haplotype. The bottom row is the haplotype for this man and above him are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are very much a work in progress, and any suggested modifications are appreciated. I think we can use our vast collection of haplotype data to refine these haplotypes. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
P312/S1161324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123315916122626191211131210912121011113012132413101020151913241712152412231810141791211
Beaman1324141111-14121211131329189-1011112415193215-15-17-18111119-231515171738-38121211915-1681010810101223-241610121015812222013131113111112113515917122626191211121210912121011113012122413111022152113241712142412241910141791211

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: UEJFD1610414696335328435805
Used in age calculations1610414696335328435805
Counts of SNPs3229
Variant counts last updated 2017-12-13 11:43:24.



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