Tree Position

R-P312/S116 > Z40481 > ZZ11 > U152/S28 > L2/S139 > Z41150 > Z49 > Z142/S211 > Z51 > Z50 > Z57 > S1491 > Y23961

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
392206
BigY3
392206
BigY2
392206
22216862-G-A 20054976-G-A Y77992 DYZ19 **A+
3861981-A-C 3993940-A-C A+
20596740-T-C 18434854-T-C P5_Dst A*
6241411-G-A 6373370-G-A IR3_Dst ***A*A*
26251454-G-T 24105307-G-T P1_Y1 ***A*A*
26115310-C-T 23969163-C-T P1_Y1 ***A*A*
19583033-A-G 17471153-A-G P5_Prx Y***A*A*
18453670-T-C 16341790-T-C P6_Dst A*
20918447-G-A 18756561-G-A P4_Dst A*
6309526-A-C 6441485-A-C IR3_Dst A*
19973549-A-G 17861669-A-G P5_Prx ***A*
20725728-C-T 18563842-C-T P4_Prx ***A*A*
26349551-G-C 24203404-G-C P1_Y1 A*
22346252-T-C 20184366-T-C DYZ19 ***A*
22344974-T-G 20183088-T-G DYZ19 A*
14676813-G-A 12564879-G-A FT96509 Y+
22470229-T-G 20308343-T-G BY43953 DYZ19 +**+
15263618-C-T 13151708-C-T FT96555 YY+**
26707404-A-C 24561257-A-C P1_g2 +
28666137-G-T 26519990-G-T FT93488 +
11001171-C-T +
10664441-C-G FT165215 +
9511791-T-A 9674182-T-A FT93123 +
4395871-G-A 4527830-G-A FT92823 +
11016861-ATTCCATTCCATTTTG-A +**
3916388-G-A 4048347-G-A FT95199 +
3738605-A-G 3870564-A-G FT95137 +
3731162-T-C 3863121-T-C FT92745 +
2937117-T-C 3069076-T-C FT94861 +
18382119-C-G 16270239-C-G P6_Gap +**
5914220-T-C 6046179-T-C FT93028 +**
19476524-G-C 17364644-G-C FT93360 YY+**
5763603-C-T 5895562-C-T FT93006 +
3907549-A-G 4039508-A-G FT95196 +
21834456-G-A 19672570-G-A Y77226 Y+++
17686216-C-G 15574336-C-G BY116662 YY+++
21343331-T-C 19181445-T-C Y76292 YY+++
2700803-C-G 2832762-C-G Y60149 YY+++
2838059-C-G 2970018-C-G Y60365 YY+++
7513446-G-A 7645405-G-A Y62076 Y+++
7740570-G-T 7872529-G-T Y62477 YY+++
8249277-C-A 8381236-C-A Y63385 YY+++
8315061-G-A 8447020-G-A A18366 YY+++
15173274-A-G 13061360-A-G Y67828 YY+++
16405285-G-T 14293405-G-T Y69829 YY++**
16856073-C-T 14744193-C-T BY15370 YY+++
17554172-G-A 15442292-G-A BY115665 YY+++
17507240-C-T 15395360-C-T Y71796 YY+++
18064776-T-C 15952896-T-C Y72957 YY+++
21082606-G-T 18920720-G-T Y75776 YY+++
18290099-G-C 16178219-G-C BY121409 P6_Prx +++
18572664-G-C 16460784-G-C Y73660 YY+++
18887603-T-C 16775723-T-C Y74213 YY+++
19284843-C-A 17172963-C-A Y75041 YY+++
21464176-A-C 19302290-A-C YY+
19412048-GAA-G 17300168-GAA-G *
22316662-C-G 20154776-C-G DYZ19 *******
5497443-A-T 5629402-A-T *
3662762-C-T 3794721-C-T *
22340971-T-G 20179085-T-G DYZ19 ****
13275136-A-G 11119460-A-G **
15423258-G-C 13311378-G-C **
15402612-C-T 13290732-C-T **
13487839-G-C 11332163-G-C **
11644544-A-G **
13604745-T-C 11449069-T-C **
13605866-A-G 11450190-A-G **
13633011-C-A 11477335-C-A **
13605854-T-C 11450178-T-C **
13605868-C-T 11450192-C-T **
13205450-G-C 11049774-G-C **
13605855-G-A 11450179-G-A **
13605859-T-C 11450183-T-C **
13205466-G-A 11049790-G-A **
10993927-C-A **
13205442-G-A 11049766-G-A **
13205438-T-C 11049762-T-C **
13205433-T-C 11049757-T-C **
13205397-C-G 11049721-C-G **
11037823-C-G **
11028321-C-T **
11023113-A-G **
13871415-G-A 11750709-G-A **
10987723-TCATTC-T **
10986904-C-A **
10979892-C-A **
10978682-T-C **
10977099-A-ACTCCT **
10976763-T-A **
15570816-T-C 13458936-T-C **
11654080-T-C **
14178186-G-T 12057480-G-T **
13872102-A-G 11751396-A-G **
14458306-C-A 12337579-C-A **
15285892-A-G 13173991-A-G **
15260067-T-C 13148151-T-C **
15212649-G-C 13100735-G-C **
15081507-G-C 12969597-G-C **
14802562-A-G 12690633-A-G **
14774246-C-T 12662315-C-T **
14700920-C-A 12588986-C-A **
10961230-C-A **
14660522-C-A 12548587-C-A **
14562389-G-A 12450589-G-A **
15368657-C-A 13256777-C-A **
14559266-G-T 12447467-G-T **
14511384-T-C 12399589-T-C **
14457549-C-A 12336822-C-A **
13880297-A-T 11759591-A-T **
14457387-CAAAA-C 12336660-CAAAA-C 18×A**
14233473-T-C 12112767-T-C **
14212167-T-G 12091461-T-G **
14212118-A-C 12091412-A-C **
14159720-C-A 12039014-C-A **
14153262-A-G 12032556-A-G **
14142419-T-C 12021713-T-C **
14142401-C-T 12021695-C-T **
14101265-TTTTC-T 11980559-TTTTC-T **
14047195-C-A 11926489-C-A **
15394407-C-T 13282527-C-T **
13961781-C-T 11841075-C-T **
13911611-T-G 11790905-T-G **
13890936-T-A 11770230-T-A **
10971711-C-T **
10860934-T-C **
10958514-TC-T **
10762648-A-T **
10798646-C-A **
10788764-A-G **
10788371-C-A **
10784985-C-A **
10782971-C-T **
10782332-T-C **
10775338-C-G **
10774857-G-A FT91673 **
10772912-C-A **
10767472-C-A **
10766050-C-T **
10765183-A-G **
10762716-C-A **
10762677-C-T **
10751905-A-T **
10800867-T-G **
10654062-T-C **
9890320-G-T 10052711-G-T **
9925134-C-A 10087525-C-A **
9932159-C-A 10094550-C-A **
9975061-T-A 10137452-T-A **
10032448-C-A 10194839-C-A **
10060672-C-A 10223063-C-A **
10659935-A-G **
10751433-C-T **
10668877-C-T **
10682903-C-G **
10682974-C-T **
10688692-C-A **
10748017-A-ATTTAT **
10748037-A-ACTTGTGTAGG **
10800866-A-G **
10800871-A-T **
10955601-C-A **
10939371-C-T **
10907289-G-T **
10918138-C-G **
10921150-C-CAA **
10921179-T-A **
10924303-A-G **
10936105-T-G **
10940546-C-G **
10901786-CCGTTG-C **
10940554-TC-T **
10940560-C-CCTTTCGAATG **
10940580-G-A **
10940789-T-C **
10942978-G-A **
10947040-C-A **
10901798-A-T **
10901784-A-T **
10802203-T-G **
10852493-C-G **
10804374-C-A **
10811828-C-A **
10812764-C-A **
10832108-C-G **
10849490-C-G **
10849902-C-A **
15630068-A-G 13518188-A-G **
10901781-T-C **
10862967-C-T **
10884336-A-ATTC **
10888186-G-T **
10892479-ACTC-A **
10892483-TTTTCCAC-T **
10901474-C-A **
15629785-G-T 13517905-G-T **
17967298-A-G 15855418-A-G **
15632016-T-C 13520136-T-C **
23475670-C-A 21313784-C-A **
27467350-A-C 25321203-A-C P1_Y2 **
27423642-C-T 25277495-C-T P1_g3 **
26152134-C-G 24005987-C-G P1_Y1 **
26117816-C-T 23971669-C-T P1_Y1 **
26117802-T-G 23971655-T-G P1_Y1 **
26117781-C-G 23971634-C-G P1_Y1 **
24666412-C-A 22520265-C-A P3_b2 **
24525867-A-AT 22379720-A-AT P3_t2 **
24376210-T-G 22230063-T-G **
24002985-C-T 21856838-C-T **
23953941-C-A 21807794-C-A **
23885231-A-G 21723345-A-G **
23875363-G-A 21713477-G-A **
23786642-T-C 21624756-T-C **
23259213-A-G 21097327-A-G **
27908041-T-C 25761894-T-C P1_Y2 **
22962199-T-G 20800313-T-G **
22548104-A-G 20386218-A-G **
22592340-T-C 20430454-T-C **
22614001-A-G 20452115-A-G **
22624839-A-G 20462953-A-G **
22756811-T-A 20594925-T-A **
22804029-A-T 20642143-A-T **
22962219-A-AG 20800333-A-AG **
23188459-C-A 21026573-C-A **
22994928-C-T 20833042-C-T **
23019799-C-A 20857913-C-A **
23039603-C-A 20877717-C-A **
23045938-A-G 20884052-A-G **
23094924-T-A 20933038-T-A **
23137531-C-G 20975645-C-G **
27584628-T-C 25438481-T-C P1_Y2 **
27917374-A-G 25771227-A-G P1_Y2 **
22173527-T-G 20011641-T-G **
3461198-T-C 3593157-T-C **
28449637-C-CT 26303490-C-CT P1_gr2 17×T**
28449577-C-A 26303430-C-A P1_gr2 **
26089087-G-T 23942940-G-T P1_Y1 **
25864035-T-A 23717888-T-A P1_Y1 **
25615310-G-T 23469163-G-T P1_gr1 **
18361451-A-T 16249571-A-T P6_Prx **
18356227-T-C 16244347-T-C P6_Prx **
17455075-G-A 15343195-G-A **
17455072-G-A 15343192-G-A **
16979277-T-A 14867397-T-A **
16096914-T-A 13985034-T-A **
15963274-A-G 13851394-A-G **
7578391-G-A 7710350-G-A **
4164290-C-T 4296249-C-T **
26101391-C-A 23955244-C-A P1_Y1 **
28113197-A-AT 25967050-A-AT P1_Y2 **
28677424-T-C 26531277-T-C **
28520521-G-A 26374374-G-A **
28587169-A-G 26441022-A-G **
28625725-C-A 26479578-C-A **
28646588-C-A 26500441-C-A **
28661578-C-A 26515431-C-A **
28677372-C-A 26531225-C-A **
28707792-C-A 26561645-C-A **
16096758-A-C 13984878-A-C **
28754267-C-A 26608120-C-A **
28755689-C-A 26609542-C-A **
28772016-G-A 26625869-G-A **
28798491-GA-G 26652344-GA-G **
56850612-C-A **
56858396-A-AG **
22548048-G-A 20386162-G-A **
22173456-T-G 20011570-T-G **
15653608-T-C 13541728-T-C **
16881587-A-T 14769707-A-T **
18256239-A-T 16144359-A-T **
18187438-C-T 16075558-C-T **
18158757-A-G 16046877-A-G **
18053500-C-A 15941620-C-A **
9628231-A-G 9790622-A-G IR3_Prx **
17953690-A-C 15841810-A-C **
17929658-T-C 15817778-T-C **
17379661-C-A 15267781-C-A **
17250147-C-A 15138267-C-A **
17227719-A-G 15115839-A-G **
17218300-CTTTTTTTTT-C 15106420-CTTTTTTTTT-C 16×T**
17159693-T-C 15047813-T-C **
17064902-A-G 14953022-A-G **
16993489-G-T 14881609-G-T **
16675804-T-A 14563924-T-A **
18504851-A-T 16392971-A-T P6_Dst **
16063548-T-C 13951668-T-C **
15742234-G-T 13630354-G-T **
15769138-A-T 13657258-A-T **
15937142-C-A 13825262-C-A **
16047260-A-G 13935380-A-G **
16048883-C-A 13937003-C-A **
16063544-G-T 13951664-G-T **
16111078-T-TAC 13999198-T-TAC P8_Prx **
16432668-C-A 14320788-C-A **
16177255-C-A 14065375-C-A **
16214662-C-T 14102782-C-T **
16305897-C-T 14194017-C-T **
16316622-A-T 14204742-A-T **
16342265-G-T 14230385-G-T **
16425780-A-T 14313900-A-T **
18480339-T-G 16368459-T-G P6_Dst **
18707776-A-G 16595896-A-G **
22090213-G-C 19928327-G-C **
20962579-T-TA 18800693-T-TA P4_Dst **
22000632-C-G 19838746-C-G **
21969153-G-T 19807267-G-T **
21949938-C-A 19788052-C-A **
21939711-G-A 19777825-G-A **
21884434-A-G 19722548-A-G **
21828457-C-A 19666571-C-A **
21596997-G-A 19435111-G-A **
21576575-C-A 19414689-C-A **
21526902-C-A 19365016-C-A **
21499007-G-T 19337121-G-T **
21435133-TA-T 19273247-TA-T **
21320358-A-G 19158472-A-G **
21320097-G-A 19158211-G-A **
21154020-T-C 18992134-T-C **
20962572-T-G 18800686-T-G P4_Dst **
18780526-C-T 16668646-C-T **
19310897-C-A 17199017-C-A **
18818053-G-T 16706173-G-T **
18873988-C-A 16762108-C-A **
18880043-A-C 16768163-A-C **
18933971-T-G 16822091-T-G **
19052187-G-T 16940307-G-T **
19302796-T-C 17190916-T-C **
19379482-C-A 17267602-C-A **
20809850-T-G 18647964-T-G FT150243 P4_Gap **
19393151-C-A 17281271-C-A **
19412678-G-A 17300798-G-A **
19460364-CT-C 17348484-CT-C **
19460632-C-A 17348752-C-A **
19529546-C-CA 17417666-C-CA ****
19741094-G-T 17629214-G-T P5_Prx **
9765867-C-A 9928258-C-A **
18040350-A-ATATTAT 15928470-A-ATATTAT 13×TAT**
9426758-C-A 9589149-C-A **
14142418-T-C 12021712-T-C **
23137529-C-G 20975643-C-G **
21946459-G-T 19784573-G-T **
10921147-ATT-A **
10921135-C-T **
21363158-C-A 19201272-C-A **
9764214-G-C 9926605-G-C **
2833178-CTTTTTTTT-C 2965137-CTTTTTTTT-C 19×T**
27584619-C-T 25438472-C-T P1_Y2 **
10921165-C-T **
12631481-C-CT 13×T**
3531987-G-T 3663946-G-T **
13597309-C-A 11441633-C-A **
16648219-C-T 14536339-C-T **
16481062-G-A 14369182-G-A **
7935806-C-A 8067765-C-A **
5084675-C-A 5216634-C-A **
10773426-A-T **
11663151-G-A **
28818113-A-T 26671966-A-T **
14517645-C-A 12405846-C-A **
18190630-C-A 16078750-C-A **
17722673-A-C 15610793-A-C **
28521760-C-A 26375613-C-A **
13472205-G-T 11316529-G-T **
2718950-T-C 2850909-T-C **
4159629-C-A 4291588-C-A **
10667384-C-A **
14261534-C-A 12140828-C-A **
10940548-G-T **
7188244-C-A 7320203-C-A **
14832189-G-A 12720256-G-A **
10762717-T-G **
4805238-C-A 4937197-C-A **
9123320-G-T **
13936390-C-A 11815684-C-A **
8279764-C-A 8411723-C-A **
10802830-C-A **
8988120-G-T 9150511-G-T **
13571953-C-A 11416277-C-A **
22613868-A-G 20451982-A-G **
7277598-C-A 7409557-C-A **
26248366-G-T 24102219-G-T P1_Y1 **
22215038-A-G 20053152-A-G **
15860247-G-A 13748367-G-A **
10782311-C-A **
18191978-G-T 16080098-G-T **
16048029-C-A 13936149-C-A **
10866352-T-A **
17002641-C-A 14890761-C-A **
13205417-CA-C 11049741-CA-C **
24283408-T-A 22137261-T-A P3_t1 **
7360753-C-A 7492712-C-A **
2719041-C-A 2851000-C-A **
17380736-C-A 15268856-C-A **
16245218-C-A 14133338-C-A **
10662116-C-A **
7414252-T-G 7546211-T-G **
10947268-C-A **
22855001-A-C 20693115-A-C **
20352261-C-A 18190375-C-A P5_Dst **
15769159-T-C 13657279-T-C **
17716739-C-A 15604859-C-A **
18127888-C-A 16016008-C-A **
13644101-C-T 11488425-C-T **
6454749-C-A 6586708-C-A **
10762643-A-T **
18880054-G-A 16768174-G-A **
10693046-C-A **
22521166-C-A 20359280-C-A **
6829754-C-A 6961713-C-A **
10994215-C-A **
15379396-C-A 13267516-C-A **
13297835-C-A 11142159-C-A **
10942603-T-A **
19302967-G-T 17191087-G-T **
6155268-C-A 6287227-C-A IR3_Dst **
10801431-T-G **
10801425-T-A **
10801414-A-G **
10677000-C-A **
20376539-C-A 18214653-C-A P5_Dst **
11024368-C-A **
27216732-G-T 25070585-G-T P1_g3 **
19557572-C-A 17445692-C-A **
15926784-C-A 13814904-C-A **
15280766-C-A 13168865-C-A **
3622236-C-A 3754195-C-A **
2718907-C-T 2850866-C-T **
10954248-A-T **
5650798-G-T 5782757-G-T **
7362106-C-A 7494065-C-A **
19340415-C-A 17228535-C-A **
13205453-G-A 11049777-G-A **
59003743-A-G 56857596-A-G **
58996402-G-T 56850255-G-T **
22244084-C-T 20082198-C-T DYZ19 **
17663115-AGAC-A 15551235-AGAC-A **
17030757-A-T 14918877-A-T 24×T**
16052140-C-A 13940260-C-A **
10808010-GCATTC-G **
11022194-G-T **
2833221-C-A 2965180-C-A **
10940573-T-C **
28481205-C-A 26335058-C-A **
13860694-C-A 11739988-C-A **
17561424-C-A 15449544-C-A **
10942612-T-C **
10762664-C-A **
7783351-C-A 7915310-C-A **
20943477-C-CTA 18781591-C-CTA P4_Dst 12×TG**
59003835-C-T 56857688-C-T **
22820356-A-T 20658470-A-T **
15358754-G-T 13246873-G-T **
2775368-C-A 2907327-C-A **
10986872-C-A **
15278943-C-A 13167042-C-A **
6693009-C-A 6824968-C-A **
17953836-C-A 15841956-C-A **
8712102-C-A 8844061-C-A **
23176939-C-A 21015053-C-A **
10765713-C-A **
13488217-A-G 11332541-A-G **
22079709-C-A 19917823-C-A **
56846948-G-A **
13944529-C-A 11823823-C-A **
14510030-C-A 12398235-C-A **
3467618-C-A 3599577-C-A **
15593164-C-A 13481284-C-A **
13605849-A-G 11450173-A-G **
16063531-C-G 13951651-C-G **
16063535-C-G 13951655-C-G **
13896252-C-A 11775546-C-A **
19043728-C-A 16931848-C-A **
6090500-C-A 6222459-C-A **
10762737-G-T **
56842388-T-C **
5684597-C-A 5816556-C-A **
5274814-C-A 5406773-C-A **
5299436-C-A 5431395-C-A **
5380439-A-T 5512398-A-T **
5484013-G-T 5615972-G-T **
5495298-A-T 5627257-A-T **
5620821-T-A 5752780-T-A **
5784360-C-A 5916319-C-A **
5172404-T-C 5304363-T-C **
6064218-A-G 6196177-A-G **
6354366-C-G 6486325-C-G **
6514197-C-A 6646156-C-A **
6580511-C-A 6712470-C-A **
6593575-A-G 6725534-A-G **
6637360-C-A 6769319-C-A **
5200927-T-A 5332886-T-A **
5015025-A-G 5146984-A-G **
6697150-G-T 6829109-G-T **
4680729-A-G 4812688-A-G **
4259622-C-A 4391581-C-A **
4416766-G-A 4548725-G-A **
4472422-C-A 4604381-C-A **
4473555-A-G 4605514-A-G **
4555320-G-T 4687279-G-T **
4680713-C-A 4812672-C-A **
4863412-T-C 4995371-T-C **
5011768-C-A 5143727-C-A **
4873771-T-A 5005730-T-A **
4873947-C-A 5005906-C-A FT4110 **
4919656-C-A 5051615-C-A **
4930253-A-G 5062212-A-G **
4957707-C-A 5089666-C-A **
4975051-T-G 5107010-T-G **
4975177-A-T 5107136-A-T **
6697144-A-C 6829103-A-C **
6771493-A-C 6903452-A-C **
4171798-T-C 4303757-T-C **
8279708-T-A 8411667-T-A **
7821198-C-T 7953157-C-T **
7821311-T-C 7953270-T-C **
7873804-A-G 8005763-A-G **
7935779-T-A 8067738-T-A **
7970338-G-A 8102297-G-A **
8061866-G-A 8193825-G-A **
8279711-G-A 8411670-G-A **
7710502-G-T 7842461-G-T **
8387564-G-C 8519523-G-C **
24388225-CTA-C 22242078-CTA-C **
8740014-G-A 8871973-G-A **
9119987-C-A **
8973603-T-A 9135994-T-A **
8987005-G-A 9149396-G-A **
9047496-A-G 9209887-A-G **
7755197-A-G 7887156-A-G **
7664827-C-T 7796786-C-T **
6776297-G-A 6908256-G-A **
7098678-A-G 7230637-A-G **
6806887-A-G 6938846-A-G **
6892390-T-G 7024349-T-G **
6892481-A-G 7024440-A-G **
6992553-C-CTTT 7124512-C-CTTT 17×T**
7001702-C-A 7133661-C-A **
7083063-G-T 7215022-G-T **
7099083-A-T 7231042-A-T **
7590626-A-C 7722585-A-C **
7100563-C-A 7232522-C-A **
7132230-T-C 7264189-T-C **
7138149-T-C 7270108-T-C **
7138196-A-T 7270155-A-T **
7155656-G-A 7287615-G-A **
7275125-C-A 7407084-C-A **
7532281-T-TATATATATAC 7664240-T-TATATATATAC **
4229955-C-A 4361914-C-A **
4975033-T-C 5106992-T-C **
8389777-GTGTTAGCCAGGA-G 8521736-GTGTTAGCCAGGA-G **
2729819-C-A 2861778-C-A **
3272584-C-A 3404543-C-A **
3131328-T-C 3263287-T-C **
3115794-C-A 3247753-C-A **
2948201-T-A 3080160-T-A **
2947799-A-T 3079758-A-T **
2900639-C-A 3032598-C-A **
16342256-AGAAGGAAG-A 14230376-AGAAGGAAG-A 7×GAAG**
10935866-C-A **
15940254-C-A 13828374-C-A **
2792982-A-G 2924941-A-G **
2775324-C-T 2907283-C-T **
2719025-C-A 2850984-C-A **
3328831-G-A 3460790-G-A **
2718948-G-T 2850907-G-T **
2718940-A-G 2850899-A-G **
2718938-G-C 2850897-G-C **
2669919-G-C 2801878-G-C **
10762623-CCATTT-C **
16094315-C-A 13982435-C-A **
11015036-G-T **
17374456-C-T 15262576-C-T FT99461 **
23304396-C-A 21142510-C-A **
7898768-C-A 8030727-C-A **
10786925-G-A **
3328716-C-T 3460675-C-T **
56841428-T-C **
3960980-C-A 4092939-C-A **
4002551-C-G 4134510-C-G **
13205409-T-C 11049733-T-C **
4046598-C-A 4178557-C-A **
3814919-G-T 3946878-G-T **
3705062-G-C 3837021-G-C **
3680835-G-T 3812794-G-T **
15107102-C-A 12995189-C-A **
3621322-A-G 3753281-A-G **
3599527-C-A 3731486-C-A **
10617729-C-A **
3437400-C-A 3569359-C-A **
4047693-G-T 4179652-G-T **
4070169-G-A 4202128-G-A **
3346634-A-G 3478593-A-G **
4110602-C-A 4242561-C-A **
3346568-C-A 3478527-C-A **
4063746-C-A 4195705-C-A **
4065057-A-T 4197016-A-T **
3328958-G-A 3460917-G-A **
3328856-C-T 3460815-C-T **
19517433-C-A 17405553-C-A ***
14639340-G-T 12527409-G-T ***
15874319-CA-C,CAA 13762439-CA-C,CAA 15×A***
15565939-CAA-C,CAAAA 13454059-CAA-C,CAAAA 16×A***
8126382-AT-A 8258341-AT-A ***
13485713-T-C 11330037-T-C ***
13485734-T-A 11330058-T-A ***
21416775-A-G 19254889-A-G ***
13414818-G-T 11259142-G-T ***
13838447-G-A 11717741-G-A ***
19663298-CGTGTGTGT-C 17551418-CGTGTGTGT-C P5_Prx 17×GT***
4076728-GTATA-G 4208687-GTATA-G 10×TA***
8973561-C-A 9135952-C-A ***
25188753-AC-A 23042606-AC-A g1 ***
24826447-ATAGT-A 22680300-ATAGT-A P3_b2 ***
22476656-G-T 20314770-G-T DYZ19 ***
22425252-G-T 20263366-G-T DYZ19 ***
22363581-G-C 20201695-G-C DYZ19 ***
7717616-T-TTTCC 7849575-T-TTTCC ***
13718874-C-A 11563198-C-A ***
22264100-T-C 20102214-T-C DYZ19 ******
22237231-T-C 20075345-T-C DYZ19 ***
19699229-CT-C 17587349-CT-C P5_Prx ***
19138577-C-T 17026697-C-T ***
18775551-AT-A 16663671-AT-A 9×T***
14023238-C-A 11902532-C-A ***
10766574-C-A ***
3407686-C-A 3539645-C-A ***
10764607-TTCCAT-T,TTCCAC ***
13431533-T-TA 11275857-T-TA 11×A***
16060065-C-A 13948185-C-A ***
19412050-A-AAGAAAG 17300170-A-AAGAAAG ***
13644736-C-A 11489060-C-A ***
18872180-C-G 16760300-C-G ***
14916783-C-T 12804850-C-T Y92525 ***
5761222-C-A 5893181-C-A ***
18533934-T-C 16422054-T-C P6_Dst ***
7436324-C-A 7568283-C-A ***
18191816-C-A 16079936-C-A ***
24421740-G-A 22275593-G-A ***
18085103-T-C 15973223-T-C ***
14916824-A-G 12804891-A-G ***
7608436-CCTCT-C,CCT 7740395-CCTCT-C,CCT 15×CT***
10971194-G-T ***
13485611-A-C 11329935-A-C ***
7591181-T-A 7723140-T-A ***
17074613-A-C 14962733-A-C ***
9426611-C-A 9589002-C-A ***
14422936-G-A 12302211-G-A ***
11655741-C-A ***
21125180-G-T 18963294-G-T ***
26593205-A-G 24447058-A-G P1_g2 ***
21457442-T-A 19295556-T-A ***
10787542-C-A ***
10831576-C-G ***
14916813-A-C 12804880-A-C ***
14916816-G-A 12804883-G-A FT21698 ***
14916818-A-G 12804885-A-G ***
13487748-ACC-A 11332072-ACC-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 3922061081627378562947937684
Kit: 392206983054180079117889899
Kit: 3922061506802994182478342005
Used in age calculations1506802994182478342005
Counts of SNPs2420
Variant counts last updated 2019-11-11 02:36:12.



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