Phillips

FTDNA: 259349, BigY2: 259349, BigY3: 259349

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF63/S522 > BY592 > CTS5454 > Z16245 > Z16246 > BY3070 > FT72783 > FGC36423

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
259349		BigY2
259349		BigY3
259349
26418917-G-A 24272770-G-A P1_Y1 A+
19725205-A-AC 17613325-A-AC P5_Prx A*
20776894-C-T 18615008-C-T P4_Prx ***A*A*
26012933-T-C 23866786-T-C P1_Y1 ***A*A*
26043716-C-G 23897569-C-G P1_Y1 ***A*A*
13698521-T-C 11542845-T-C DYZ17 A*A*
28817313-G-T 26671166-G-T A*A*
18281506-C-T 16169626-C-T P6_Prx A*
19808353-A-T 17696473-A-T P5_Prx A*
20247690-G-A 18085804-G-A P5_Dst A*
9880202-T-G 10042593-T-G BY49427 YY+++
4212862-G-A 4344821-G-A BY53517 **++
6825228-C-T 6957187-C-T FT81724 YY+++
7213010-A-G 7344969-A-G BY63939 YY+++
7555940-C-T 7687899-C-T BY65876 YY+++
8499473-G-A 8631432-G-A BY73443 YY+++
13197355-G-A 11041679-G-A BY84246 +++
14208080-C-G 12087374-C-G BY93884 YY+++
14577565-G-C 12465765-G-C BY96552 YY+++
14823098-C-T 12711165-C-T BY97798 YY+++
15203430-G-A 13091516-G-A BY100154 YY+++
17232237-G-A 15120357-G-A BY113144 YY+++
17674083-T-C 15562203-T-C BY116543 YY+++
18392451-A-G 16280571-A-G BY121615 P6_Gap +++
18423113-C-G 16311233-C-G BY121905 P6_Gap +++
18700349-G-A 16588469-G-A BY123242 YY+++
19122836-T-C 17010956-T-C BY126490 YY+++
19197784-G-A 17085904-G-A BY127141 YY+++
21653423-A-C 19491537-A-C BY134492 YY+++
22467269-C-T 20305383-C-T BY221884 DYZ19 ++**
23631659-C-T 21469773-C-T YY+++
23842933-C-A 21681047-C-A BY148267 Y+++
24477597-G-A 22331450-G-A BY150244 Y+++
7434885-G-A 7566844-G-A FT81748 Y**+
17444814-A-G 15332934-A-G FT82043 YY**+
17807252-CTT-C 15695372-CTT-C **+
19078909-C-A 16967029-C-A FT82118 YY**+
23044192-C-A 20882306-C-A FT82231 YY**+
23983813-G-A 21837666-G-A FT82257 Y**+
10688058-T-C FT429069 +
3369311-T-C 3501270-T-C FT81180 +
3529786-G-A 3661745-G-A FT81212 +
4092559-T-C 4224518-T-C FT81312 +
5032215-G-A 5164174-G-A FT81463 +
5989296-T-A 6121255-T-A FT81643 +
6093486-G-T 6225445-G-T FT81663 +
10865283-A-C FT434642 +
13528581-G-A 11372905-G-A FT444796 +
21863310-C-T 19701424-C-T FT82189 Y+
17794253-G-GTTCTTTCT 15682373-G-GTTCTTTCT 10×TTCT**
18472830-ATATTT-A 16360950-ATATTT-A P6_Dst 6×TATTT**
15402322-C-A 13290442-C-A ZS3357 **
16045780-C-A 13933900-C-A **
18838495-T-C 16726615-T-C Z10929 **
22219626-C-A 20057740-C-A CTS10893FGC17839 DYZ19 **
13460518-C-A 11304842-C-A **
21746260-C-T 19584374-C-T **
13640874-T-G 11485198-T-G ****
13640908-C-T 11485232-C-T **
22362484-G-C 20200598-G-C DYZ19 **
28168143-A-G 26021996-A-G P1_b4 **
9849751-C-G 10012142-C-G BY21404BY21409 ****
13745533-T-C 11589857-T-C DYZ17 **
10921086-C-A **
10921089-TTCACAGCACC-T **
10921132-A-C **
11001995-C-A **
5190916-C-A 5322875-C-A **
16550983-C-A 14439103-C-A **
5358648-C-A 5490607-C-A **
10921208-C-T **
16645864-C-A 14533984-C-A **
15995578-C-A 13883698-C-A **
28726605-C-A 26580458-C-A **
4129673-C-A 4261632-C-A **
11021372-C-T **
18707211-C-A 16595331-C-A **
24671180-T-C 22525033-T-C P3_b2 **
23096696-C-T 20934810-C-T **
14694788-C-A 12582854-C-A **
21262718-C-A 19100832-C-A **
10658130-T-C **
17095330-C-A 14983450-C-A **
3367144-C-A 3499103-C-A **
14245199-A-T 12124493-A-T **
13902887-C-A 11782181-C-A **
20954342-A-AG 18792456-A-AG P4_Dst **
6458343-C-A 6590302-C-A **
10829013-C-A **
4223350-C-A 4355309-C-A **
10682552-C-A **
26029762-T-TA 23883615-T-TA P1_Y1 **
17707375-T-A 15595495-T-A **
22614241-C-A 20452355-C-A **
10764141-T-C **
10849650-C-G **
8043338-A-G 8175297-A-G FT248490 **
7172614-C-A 7304573-C-A **
19950226-G-T 17838346-G-T P5_Prx **
2979311-T-G 3111270-T-G F14732 *****
20557620-G-T 18395734-G-T P5_Dst **
6634258-C-A 6766217-C-A **
10969962-T-TCTACTCCCA **
7042698-C-A 7174657-C-A **
22808746-C-A 20646860-C-A **
10921152-A-C **
11037808-C-A **
14589264-C-A 12477464-C-A **
28700881-C-A 26554734-C-A **
15921228-C-A 13809348-C-A **
14332569-C-A 12211863-C-A **
21162837-C-A 19000951-C-A **
3051896-C-A 3183855-C-A **
17707363-C-G 15595483-C-G **
19510332-C-A 17398452-C-A **
16648368-C-T 14536488-C-T **
17274232-C-A 15162352-C-A **
19351393-G-T 17239513-G-T **
23262768-C-A 21100882-C-A **
13469450-G-A 11313774-G-A **
13469461-T-A 11313785-T-A **
22423424-A-C 20261538-A-C DYZ19 **
14390001-C-A 12269297-C-A **
3995154-C-A 4127113-C-A **
21115820-C-A 18953934-C-A **
10686543-T-C **
21582498-G-T 19420612-G-T **
18340732-T-G 16228852-T-G P6_Prx **
6040165-C-A 6172124-C-A **
8673822-C-A 8805781-C-A FT146047 **
3603268-C-A 3735227-C-A **
17053223-C-A 14941343-C-A **
21371615-C-A 19209729-C-A **
5577460-C-A 5709419-C-A **
10780171-C-A **
3990949-C-A 4122908-C-A **
9123134-G-T **
10764154-T-C **
25995096-A-AATAT 23848949-A-AATAT P1_Y1 9×AT**
14771749-G-C 12659818-G-C **
11643811-A-G DYZ17 **
5409885-G-T 5541844-G-T **
18098901-C-A 15987021-C-A **
10851810-T-C **
19873502-C-A 17761622-C-A P5_Prx **
14181806-G-T 12061100-G-T **
13521645-C-A 11365969-C-A **
18812066-C-A 16700186-C-A **
2888857-C-G 3020816-C-G **
15712345-C-A 13600465-C-A **
4861866-C-A 4993825-C-A **
13973228-C-A 11852522-C-A **
17213111-C-A 15101231-C-A **
56842076-T-A **
10658142-T-A **
23026697-C-A 20864811-C-A **
6775994-C-A 6907953-C-A **
14355485-T-C 12234780-T-C **
14355486-G-A 12234781-G-A **
18879967-A-G 16768087-A-G **
10921157-A-C FT436613 **
14351225-C-A 12230520-C-A **
15682892-C-A 13571012-C-A **
8911569-C-A 9043528-C-A **
6765937-C-A 6897896-C-A **
2684061-C-T 2816020-C-T **
2789192-G-T 2921151-G-T **
3051910-C-A 3183869-C-A **
3092769-A-T 3224728-A-T **
3101326-AT-A 3233285-AT-A 9×T**
3140954-A-G 3272913-A-G **
3148066-C-A 3280025-C-A **
3186733-CTCTG-C 3318692-CTCTG-C **
3274108-A-G 3406067-A-G **
3330340-A-G 3462299-A-G **
3368205-C-A 3500164-C-A **
3437095-G-T 3569054-G-T **
3473601-C-A 3605560-C-A **
3546580-C-A 3678539-C-A **
3782896-G-T 3914855-G-T **
3804376-T-C 3936335-T-C **
3831020-A-T 3962979-A-T **
4050158-C-A 4182117-C-A FTA4114 **
4052724-C-A 4184683-C-A **
4093301-C-A 4225260-C-A **
4100864-C-T 4232823-C-T **
4114822-C-T 4246781-C-T **
4469987-C-G 4601946-C-G **
4479893-C-A 4611852-C-A **
4526387-G-T 4658346-G-T **
4540348-C-A 4672307-C-A **
4626892-C-A 4758851-C-A **
4741079-A-G 4873038-A-G **
4757660-C-G 4889619-C-G **
4840181-C-A 4972140-C-A **
4865314-G-T 4997273-G-T **
4893674-C-A 5025633-C-A **
5183241-A-T 5315200-A-T **
5187183-C-A 5319142-C-A **
5199517-C-A 5331476-C-A **
5323346-C-A 5455305-C-A **
5394344-G-T 5526303-G-T **
5494362-C-A 5626321-C-A **
5524147-T-C 5656106-T-C **
5524163-A-G 5656122-A-G **
5524168-A-G 5656127-A-G **
5524172-A-T 5656131-A-T **
5613540-C-A 5745499-C-A **
5617368-G-T 5749327-G-T **
5777891-C-A 5909850-C-A **
5799785-T-C 5931744-T-C **
5824654-T-C 5956613-T-C **
5829674-C-A 5961633-C-A **
5904902-C-A 6036861-C-A **
5911472-G-A 6043431-G-A **
5982717-T-A 6114676-T-A **
6051510-A-G 6183469-A-G **
6063393-C-A 6195352-C-A **
6461462-C-G 6593421-C-G **
6613232-C-G 6745191-C-G **
6699427-C-CTCTT 6831386-C-CTCTT 5×TCTT**
6830535-T-C 6962494-T-C **
6930646-C-A 7062605-C-A **
7011454-A-G 7143413-A-G **
7011459-A-ATT 7143418-A-ATT **
7021771-C-A 7153730-C-A **
7054012-C-G 7185971-C-G **
7110633-C-T 7242592-C-T **
7123495-C-A 7255454-C-A **
7128258-C-A 7260217-C-A **
7152959-C-A 7284918-C-A **
7166956-C-A 7298915-C-A **
7176994-C-A 7308953-C-A **
7235085-C-A 7367044-C-A **
7257998-C-A 7389957-C-A **
7303581-C-A 7435540-C-A **
7308380-G-A 7440339-G-A **
7311622-C-A 7443581-C-A **
7312629-G-A 7444588-G-A **
7334073-G-T 7466032-G-T **
7358314-C-A 7490273-C-A BY181133 **
7363314-C-A 7495273-C-A 10×A**
7425124-C-A 7557083-C-A **
7519067-T-G 7651026-T-G **
8119295-T-C 8251254-T-C **
8173698-G-T 8305657-G-T **
8344239-A-G 8476198-A-G **
8525378-C-A 8657337-C-A **
8671242-G-T 8803201-G-T **
8720196-G-A 8852155-G-A **
8735530-G-T 8867489-G-T **
8761838-G-T 8893797-G-T **
8848364-C-A 8980323-C-A **
8848483-C-A 8980442-C-A **
9040803-G-T 9203194-G-T **
9046993-G-T 9209384-G-T **
9427648-G-T 9590039-G-T **
9442282-T-C 9604673-T-C **
9603142-G-T 9765533-G-T IR3_Prx **
9926849-C-G 10089240-C-G **
9940006-C-A 10102397-C-A **
9942488-A-G 10104879-A-G **
9942952-G-T 10105343-G-T **
9962781-C-A 10125172-C-A **
9967081-C-A 10129472-C-A **
10045356-C-A 10207747-C-A **
10652329-C-A **
10658060-C-G **
10658141-C-A **
10658160-T-G **
10658164-C-T **
10658175-T-C **
10683186-T-C **
10761781-CTTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCA-C **
10764133-C-A **
10764139-C-A **
10812040-C-A **
10823667-C-G **
10824116-C-T **
10850205-T-A **
10857835-A-G **
10876896-T-C **
10878264-C-T **
10882631-C-A **
10884097-C-T **
10884485-T-A **
10888508-T-G **
10889088-C-A **
10895959-TC-T **
10921220-C-G **
10921221-A-T **
10921235-C-T **
10921242-A-G **
10925023-C-A **
10938228-G-A FT437340 **
10938236-A-C **
10946173-C-A **
10969964-C-CG **
10971178-T-A FT438629 **
10985028-C-G **
10992731-G-A **
10997337-C-G **
11012055-C-A **
11019476-C-A **
11022443-C-A **
13212528-G-A 11056852-G-A **
13267376-C-G 11111700-C-G **
13290698-A-T 11135022-A-T **
13294696-C-A 11139020-C-A **
13298535-TC-T 11142859-TC-T **
13325360-C-A 11169684-C-A **
13328825-C-A 11173149-C-A **
13330232-G-A 11174556-G-A **
13441563-C-A 11285887-C-A **
13443052-C-A 11287376-C-A **
13460451-G-C 11304775-G-C **
13460470-G-C 11304794-G-C **
13460514-C-G 11304838-C-G **
13463747-C-A 11308071-C-A **
13463919-A-AT 11308243-A-AT **
13478308-G-C 11322632-G-C **
13522287-G-T 11366611-G-T **
11658577-C-G DYZ17 **
11668039-C-A DYZ17 **
11675190-T-A DYZ17 **
13860619-CGAA-C 11739913-CGAA-C DYZ17 **
13860624-G-T 11739918-G-T DYZ17 **
13860626-A-AAAT 11739920-A-AAAT DYZ17 **
13898820-A-G 11778114-A-G **
13930563-G-T 11809857-G-T **
13939998-C-A 11819292-C-A **
13941725-C-A 11821019-C-A **
13973163-C-A 11852457-C-A **
13977042-C-A 11856336-C-A **
14032437-C-A 11911731-C-A **
14033914-C-A 11913208-C-A **
14047326-C-A 11926620-C-A **
14052013-C-A 11931307-C-A **
14059156-C-A 11938450-C-A **
14101059-G-T 11980353-G-T **
14123214-A-G 12002508-A-G **
14123288-C-A 12002582-C-A **
14142326-C-A 12021620-C-A **
14181582-A-G 12060876-A-G **
14228635-T-C 12107929-T-C **
14232976-C-A 12112270-C-A **
14283652-C-A 12162946-C-A **
14299876-C-A 12179170-C-A **
14355475-G-C 12234770-G-C **
14355503-T-C 12234798-T-C **
14355508-T-C 12234803-T-C **
14401935-G-T 12281232-G-T **
14431610-G-T 12310883-G-T **
14432002-C-A 12311275-C-A **
14432128-T-C 12311401-T-C **
14446962-A-C 12326235-A-C **
14451293-C-A 12330566-C-A **
14456165-A-G 12335438-A-G **
14546775-G-A 12434976-G-A **
14551647-C-T 12439848-C-T **
14561367-C-A 12449568-C-A **
14561814-C-A 12450015-C-A **
14571254-C-A 12459454-C-A **
14589205-C-A 12477405-C-A **
14621588-C-A 12509786-C-A **
14639006-C-A 12527075-C-A **
14639010-C-A 12527079-C-A **
14715148-G-T 12603215-G-T **
14725221-G-A 12613289-G-A **
14764946-C-T 12653015-C-T **
14771732-T-C 12659801-T-C **
14771739-C-CA 12659808-C-CA **
14771741-AG-A 12659810-AG-A **
14771750-G-A 12659819-G-A **
14953605-CAAAA-C 12841679-CAAAA-C 14×A**
14992601-C-G 12880686-C-G **
15060788-C-A 12948880-C-A **
15104880-C-A 12992968-C-A **
15151004-C-A 13039091-C-A **
15179240-A-G 13067326-A-G **
15193654-C-A 13081740-C-A **
15221761-C-T 13109847-C-T **
15221762-T-A 13109848-T-A **
15323608-C-A 13211726-C-A **
15378245-T-A 13266365-T-A **
15386450-G-T 13274570-G-T **
15468488-C-T 13356608-C-T **
15566723-A-G 13454843-A-G **
15619010-T-C 13507130-T-C **
15650592-G-T 13538712-G-T **
15679911-C-A 13568031-C-A **
15735415-C-A 13623535-C-A **
15904088-T-A 13792208-T-A **
15926743-G-T 13814863-G-T **
16021107-C-A 13909227-C-A **
16039327-T-G 13927447-T-G **
16075905-G-A 13964025-G-A **
16179793-C-A 14067913-C-A **
16180476-T-A 14068596-T-A **
16240696-C-A 14128816-C-A **
16351747-G-A 14239867-G-A **
16520925-G-A 14409045-G-A FTA39929 ****
16640204-T-A 14528324-T-A **
16692750-C-A 14580870-C-A **
16842590-G-C 14730710-G-C **
16847773-C-A 14735893-C-A **
17095555-G-T 14983675-G-T **
17104172-C-A 14992292-C-A **
17175434-G-T 15063554-G-T **
17201773-T-C 15089893-T-C **
17225838-C-A 15113958-C-A **
17474873-C-A 15362993-C-A **
17512623-C-A 15400743-C-A **
17518597-C-A 15406717-C-A **
17548037-C-A 15436157-C-A **
17561367-G-T 15449487-G-T **
17702444-C-A 15590564-C-A **
18007454-C-A 15895574-C-A P7_Gap **
18020784-C-A 15908904-C-A **
18101995-C-A 15990115-C-A **
18138212-A-C 16026332-A-C **
18183301-C-A 16071421-C-A **
18184659-A-G 16072779-A-G **
18186197-C-A 16074317-C-A **
18381705-C-A 16269825-C-A P6_Gap **
18539176-C-A 16427296-C-A **
18577131-C-A 16465251-C-A **
18619048-AG-A 16507168-AG-A **
18647581-C-T 16535701-C-T 56×T**
18756274-C-A 16644394-C-A **
18766736-T-C 16654856-T-C **
18848952-T-G 16737072-T-G **
18963849-G-A 16851969-G-A **
18993391-C-A 16881511-C-A **
19052101-C-T 16940221-C-T **
19112549-T-A 17000669-T-A **
19248284-C-A 17136404-C-A **
19297649-G-T 17185769-G-T **
19303019-G-T 17191139-G-T **
19382327-CTA-C 17270447-CTA-C 11×TAT**
19436829-G-T 17324949-G-T **
19558258-C-A 17446378-C-A **
19847626-A-G 17735746-A-G P5_Prx **
20458328-C-G 18296442-C-G P5_Dst **
20458861-T-C 18296975-T-C P5_Dst **
20685001-C-T 18523115-C-T P4_Prx **
20685340-C-A 18523454-C-A P4_Prx **
21061687-A-G 18899801-A-G **
21106899-G-T 18945013-G-T **
21245031-C-A 19083145-C-A **
21269388-G-T 19107502-G-T **
21340306-C-A 19178420-C-A **
21383361-A-G 19221475-A-G **
21394389-C-A 19232503-C-A **
21394446-C-A 19232560-C-A **
21428674-C-A 19266788-C-A **
21555453-C-A 19393567-C-A **
21556977-C-A 19395091-C-A **
21604072-C-A 19442186-C-A **
21709240-C-A 19547354-C-A **
21747655-C-A 19585769-C-A **
21885976-T-C 19724090-T-C **
22093000-A-G 19931114-A-G **
22168904-T-A 20007018-T-A **
22241663-G-T 20079777-G-T DYZ19 **
22281953-T-TGCAGAC 20120067-T-TGCAGAC DYZ19 **
22345766-C-A 20183880-C-A DYZ19 **
22602268-G-A 20440382-G-A **
22775411-C-A 20613525-C-A **
22791010-A-T 20629124-A-T **
22820321-C-A 20658435-C-A **
22965127-G-T 20803241-G-T **
22997484-G-A 20835598-G-A **
23008928-G-T 20847042-G-T **
23061859-C-A 20899973-C-A **
23111752-C-T 20949866-C-T Y33070 **
23199890-C-A 21038004-C-A **
23200291-A-C 21038405-A-C **
23345844-C-A 21183958-C-A **
23768770-G-T 21606884-G-T **
24290716-A-G 22144569-A-G P3_t1 **
24403758-A-G 22257611-A-G **
24446743-T-A 22300596-T-A **
24512481-C-A 22366334-C-A **
24512512-C-A 22366365-C-A **
24588060-C-T 22441913-C-T P3_t2 **
25927841-T-TC 23781694-T-TC P1_Y1 **
27029643-T-C 24883496-T-C P1_r4 **
27484466-G-T 25338319-G-T P1_Y2 **
27610056-T-G 25463909-T-G P1_Y2 **
28474690-G-T 26328543-G-T **
28481077-G-T 26334930-G-T **
28531027-A-C 26384880-A-C **
28574673-A-T 26428526-A-T **
28577952-C-G 26431805-C-G **
28608448-T-A 26462301-T-A **
28614091-C-A 26467944-C-A **
28659592-G-A 26513445-G-A **
28689212-T-C 26543065-T-C **
28712167-G-T 26566020-G-T **
28742308-T-G 26596161-T-G **
28802632-A-C 26656485-A-C **
28815228-G-A 26669081-G-A **
56842087-T-A **
56842097-G-T **
56842101-A-T **
56842106-T-A **
56842118-T-C **
56842121-G-A **
56858472-GGAAGGAAAGAAA-G **
10682529-T-G **
14416585-A-G 12295882-A-G **
10682503-A-ATAATATTACG **
10682507-C-CACATG **
5177102-C-A 5309061-C-A FTA44190 **
13574695-A-C 11419019-A-C FTA48373 **
21322251-GA-G 19160365-GA-G **
27903180-G-T 25757033-G-T P1_Y2 **
28707918-C-T 26561771-C-T **
16003058-G-T 13891178-G-T ******
13478336-C-A 11322660-C-A ***
13698396-T-C 11542720-T-C DYZ17 ***
13698397-G-T 11542721-G-T DYZ17 ***
13701757-T-C 11546081-T-C DYZ17 ***
13701758-G-T 11546082-G-T DYZ17 ***
22254649-C-A 20092763-C-A DYZ19 ***
22262475-G-C 20100589-G-C DYZ19 ***
22283343-G-C 20121457-G-C DYZ19 ***
22321560-G-C 20159674-G-C DYZ19 ***
22428121-C-A 20266235-C-A DYZ19 ***
24913655-AT-A 22767508-AT-A g1 ***
25122169-G-A 22976022-G-A g1 ***
25352883-G-A 23206736-G-A P2_r1 ***
13838490-T-A 11717784-T-A DYZ17 ***
14701054-C-A 12589120-C-A ***
10980635-G-T ***
13463967-C-G 11308291-C-G ***
11672576-C-A DYZ17 ***
10682558-A-C ***
13465928-G-T 11310252-G-T ***
18593424-C-A 16481544-C-A ***
14704700-C-A 12592766-C-A ***
10801714-T-G ***
10677528-G-C,T ***
3334493-G-A 3466452-G-A ***
6012749-T-A 6144708-T-A ***
7704820-G-T 7836779-G-T ***
7928079-G-T 8060038-G-T ***
8344233-C-T 8476192-C-T ***
10032927-C-A 10195318-C-A ***
10801756-C-G ***
10802357-A-T ***
10824196-C-A ***
10951250-C-A ***
10997773-C-G ***
13454223-TTTCCATTCCATTCCATTCCATTCCA-T 11298547-TTTCCATTCCATTCCATTCCATTCCA-T 12×TTCCA***
13463922-C-G 11308246-C-G ***
13466533-GC-G 11310857-GC-G ***
13556856-G-T 11401180-G-T ***
13922374-C-A 11801668-C-A ***
14397879-T-G 12277175-T-G ***
16046175-CT-C 13934295-CT-C 9×T***
16458366-C-A 14346486-C-A ***
16507566-C-A 14395686-C-A ***
19517415-C-A 17405535-C-A ***
21068483-T-C 18906597-T-C ***
22176687-G-A 20014801-G-A ***
23440146-G-T 21278260-G-T ***
26526566-GTT-G 24380419-GTT-G P1_Y1 16×T***
56832980-T-A ***
2752415-TAAAA-T,TAAAAA 2884374-TAAAA-T,TAAAAA 23×A***
13449764-TATTCCATTCT-T,TATTCCATTCC 11294088-TATTCCATTCT-T,TATTCCATTCC ***
3229154-CAAAA-C,CAAA 3361113-CAAAA-C,CAAA 20×A***
6040811-AC-A,AA 6172770-AC-A,AA ***
7255428-G-A 7387387-G-A ***
8170035-T-C 8301994-T-C ***
9956419-T-C 10118810-T-C ***
11008933-C-T ***
13222382-A-G 11066706-A-G ***
13222392-G-GCA 11066716-G-GCA ***
15449013-G-GA 13337133-G-GA 8×A***
24415530-A-G 22269383-A-G ***
24509447-A-G 22363300-A-G ***
56861812-CAAAAAAAAAAA-C,CA 26×A***
56880400-G-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.