Donohue
FTDNA: B9394, BigY3: B9394, BigY2: B9394MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA B9394 | BigY3 B9394 | BigY2 B9394 |
---|---|---|---|---|---|---|---|---|---|---|
13451789-C-G | 11296113-C-G | A* | ||||||||
25894460-A-T | 23748313-A-T | P1_Y1 | A* | |||||||
18451310-A-G | 16339430-A-G | P6_Dst | A* | |||||||
20559466-T-C | 18397580-T-C | P5_Dst | A* | |||||||
56836894-C-T | A* | |||||||||
7833462-C-T | 7965421-C-T | BY11467 | Y | Y | + | + | + | |||
16178476-TAATC-T | 14066596-TAATC-T | BY11475 | + | + | + | |||||
22460178-A-T | 20298292-A-T | BY220486 | DYZ19 | *** | + | + | ||||
22490400-C-G | 20328514-C-G | BY11480 | DYZ19 | + | ||||||
22225800-C-A | 20063914-C-A | BY17088 | DYZ19 | *** | * | |||||
13690110-A-C | 11534434-A-C | * | ||||||||
3836805-G-A | 3968764-G-A | * | ||||||||
17633685-AC-A | 15521805-AC-A | ** | ||||||||
15626670-G-T | 13514790-G-T | Z45116 | ** | |||||||
26415706-G-T | 24269559-G-T | P1_Y1 | ** | |||||||
9990547-C-T | 10152938-C-T | 9×T | ** | |||||||
27423515-G-GTATATATA | 25277368-G-GTATATATA | P1_g3 | 24×TA | ** | ||||||
22247199-C-A | 20085313-C-A | DYZ19 | *** | ** | ||||||
22441948-G-C | 20280062-G-C | DYZ19 | *** | ** | ||||||
14111710-G-T | 11991004-G-T | ** | ||||||||
10660986-C-A | ** | |||||||||
26415902-G-T | 24269755-G-T | P1_Y1 | ** | |||||||
23638675-C-A | 21476789-C-A | ** | ||||||||
16938200-G-T | 14826320-G-T | ** | ||||||||
3829204-C-A | 3961163-C-A | ** | ||||||||
9990432-T-A | 10152823-T-A | Z2926 | ** | |||||||
21890869-G-A | 19728983-G-A | ** | ||||||||
10881602-C-A | ** | |||||||||
15366004-G-T | 13254124-G-T | ** | ||||||||
7333041-C-A | 7465000-C-A | ** | ||||||||
10898393-T-A | ** | |||||||||
10943066-C-T | ** | |||||||||
10943069-A-ATTCTCTCGTCTCTAT | ** | |||||||||
10943079-C-T | ** | |||||||||
10943084-C-T | ** | |||||||||
10943124-C-T | ** | |||||||||
10943126-G-C | ** | |||||||||
10940320-C-A | ** | |||||||||
13898852-G-T | 11778146-G-T | ** | ||||||||
17157574-T-TA | 15045694-T-TA | 10×A | ** | |||||||
10940318-T-A | ** | |||||||||
23311253-C-T | 21149367-C-T | M7164 | ** | |||||||
16277908-C-A | 14166028-C-A | ** | ||||||||
2738761-TTC-T | 2870720-TTC-T | ** | ||||||||
18378960-T-TC | 16267080-T-TC | P6_Prx | ** | |||||||
18925472-C-A | 16813592-C-A | ** | ||||||||
5673148-C-A | 5805107-C-A | ** | ||||||||
21780426-G-C | ** | |||||||||
10940326-C-T | ** | |||||||||
17372072-C-A | 15260192-C-A | ** | ||||||||
10850534-C-A | ** | |||||||||
10767847-A-ATTATACTGCG | ** | |||||||||
10767865-G-A | ** | |||||||||
10767878-T-C | ** | |||||||||
27757819-A-T | 25611672-A-T | P1_Y2 | ** | |||||||
10936423-C-A | ** | |||||||||
14712007-C-A | 12600074-C-A | ** | ||||||||
23007203-CT-C | 20845317-CT-C | 8×T | ** | |||||||
21783783-C-A | ** | |||||||||
15202434-T-G | 13090520-T-G | ** | ||||||||
27902197-CTTTTT-C | 25756050-CTTTTT-C | P1_Y2 | 34×T | ** | ||||||
10996150-C-A | ** | |||||||||
28724366-C-T | 26578219-C-T | ** | ||||||||
5905371-C-A | 6037330-C-A | ** | ||||||||
6881529-C-A | 7013488-C-A | ** | ||||||||
4064256-C-A | 4196215-C-A | ** | ||||||||
10940338-C-T | ** | |||||||||
10907774-T-C | ** | |||||||||
22101030-C-CT | 19939144-C-CT | ** | ||||||||
14050056-C-A | 11929350-C-A | ** | ||||||||
26181958-T-C | 24035811-T-C | P1_Y1 | ** | |||||||
28724258-G-C | 26578111-G-C | ** | ||||||||
4123668-C-A | 4255627-C-A | ** | ||||||||
10940273-C-A | ** | |||||||||
10940276-A-G | ** | |||||||||
10940282-T-G | ** | |||||||||
10940295-C-G | ** | |||||||||
10940339-TCCACG-T | ** | |||||||||
6540931-C-A | 6672890-C-A | ** | ||||||||
10976925-T-C | ** | |||||||||
13226300-C-A | 11070624-C-A | ** | ||||||||
28724333-C-T | 26578186-C-T | ** | ||||||||
21367673-A-T | 19205787-A-T | ** | ||||||||
13461511-A-C | 11305835-A-C | ** | ||||||||
4235610-TA-T | 4367569-TA-T | 9×A | ** | |||||||
9990447-A-G | 10152838-A-G | ** | ||||||||
9990458-T-C | 10152849-T-C | ** | ||||||||
9990474-C-T | 10152865-C-T | ** | ||||||||
9990475-C-G | 10152866-C-G | ** | ||||||||
9990477-A-G | 10152868-A-G | ** | ||||||||
9990478-T-C | 10152869-T-C | ** | ||||||||
23603284-C-A | 21441398-C-A | ** | ||||||||
10898386-T-C | ** | |||||||||
3804729-T-C | 3936688-T-C | ** | ||||||||
10804731-G-T | ** | |||||||||
19529219-C-A | 17417339-C-A | ** | ||||||||
16092880-G-A | 13981000-G-A | ** | ||||||||
13461493-C-T | 11305817-C-T | ** | ||||||||
56869670-C-A | ** | |||||||||
21713455-C-A | 19551569-C-A | ** | ||||||||
15626537-G-T | 13514657-G-T | ** | ||||||||
10887947-C-A | ** | |||||||||
19143125-ATTTTT-A | 17031245-ATTTTT-A | 17×T | ** | |||||||
10943031-G-C | ** | |||||||||
11672943-C-A | ** | |||||||||
3334828-G-T | 3466787-G-T | ** | ||||||||
2768355-A-G | 2900314-A-G | ** | ||||||||
2860013-TCTCTC-T | 2991972-TCTCTC-T | ** | ||||||||
3122549-A-T | 3254508-A-T | ** | ||||||||
3148061-A-G | 3280020-A-G | ** | ||||||||
3187030-G-A | 3318989-G-A | ** | ||||||||
3252502-G-T | 3384461-G-T | ** | ||||||||
3286498-C-A | 3418457-C-A | ** | ||||||||
3429302-A-T | 3561261-A-T | ** | ||||||||
3444798-T-A | 3576757-T-A | ** | ||||||||
3449840-G-T | 3581799-G-T | ** | ||||||||
3501385-C-A | 3633344-C-A | ** | ||||||||
3501418-T-G | 3633377-T-G | ** | ||||||||
3551553-C-A | 3683512-C-A | ** | ||||||||
3561854-G-T | 3693813-G-T | ** | ||||||||
3592772-T-A | 3724731-T-A | ** | ||||||||
3645268-T-A | 3777227-T-A | ** | ||||||||
3651359-CT-C | 3783318-CT-C | ** | ||||||||
3651409-G-T | 3783368-G-T | ** | ||||||||
3696683-A-C | 3828642-A-C | ** | ||||||||
3835194-C-A | 3967153-C-A | ** | ||||||||
3837994-T-TAA | 3969953-T-TAA | 9×A | ** | |||||||
3891543-A-G | 4023502-A-G | ** | ||||||||
3908811-G-T | 4040770-G-T | ** | ||||||||
3921352-A-G | 4053311-A-G | ** | ||||||||
3921386-G-T | 4053345-G-T | ** | ||||||||
4035435-C-A | 4167394-C-A | ** | ||||||||
4088485-C-A | 4220444-C-A | ** | ||||||||
4110514-C-T | 4242473-C-T | ** | ||||||||
4124088-T-G | 4256047-T-G | ** | ||||||||
4222610-C-A | 4354569-C-A | ** | ||||||||
4306172-G-A | 4438131-G-A | ** | ||||||||
4306346-G-T | 4438305-G-T | ** | ||||||||
4320410-C-A | 4452369-C-A | ** | ||||||||
4382531-C-A | 4514490-C-A | ** | ||||||||
4393895-A-T | 4525854-A-T | ** | ||||||||
4396321-C-A | 4528280-C-A | ** | ||||||||
4412078-A-T | 4544037-A-T | ** | ||||||||
4423437-C-A | 4555396-C-A | ** | ||||||||
4423485-A-G | 4555444-A-G | ** | ||||||||
4423655-C-A | 4555614-C-A | ** | ||||||||
4485048-A-G | 4617007-A-G | ** | ||||||||
4503121-C-A | 4635080-C-A | ** | ||||||||
4540055-T-C | 4672014-T-C | ** | ||||||||
4580523-T-C | 4712482-T-C | ** | ||||||||
4616458-C-A | 4748417-C-A | ** | ||||||||
4634148-T-A | 4766107-T-A | ** | ||||||||
4709774-A-G | 4841733-A-G | ** | ||||||||
4709876-T-C | 4841835-T-C | ** | ||||||||
4761842-C-A | 4893801-C-A | ** | ||||||||
4784172-T-C | 4916131-T-C | ** | ||||||||
4823202-C-A | 4955161-C-A | ** | ||||||||
4851636-C-A | 4983595-C-A | ** | ||||||||
4872659-C-T | 5004618-C-T | ** | ||||||||
4880144-C-A | 5012103-C-A | ** | ||||||||
4900663-G-T | 5032622-G-T | ** | ||||||||
4916832-A-G | 5048791-A-G | ** | ||||||||
4951649-T-A | 5083608-T-A | ** | ||||||||
4964608-C-A | 5096567-C-A | ** | ||||||||
4968233-C-A | 5100192-C-A | ** | ||||||||
5082827-G-T | 5214786-G-T | ** | ||||||||
5098599-G-T | 5230558-G-T | ** | ||||||||
5099975-C-A | 5231934-C-A | ** | ||||||||
5190397-C-A | 5322356-C-A | ** | ||||||||
5191397-C-A | 5323356-C-A | ** | ||||||||
5212786-T-A | 5344745-T-A | ** | ||||||||
5212824-T-A | 5344783-T-A | ** | ||||||||
5244917-G-T | 5376876-G-T | ** | ||||||||
5337265-T-C | 5469224-T-C | ** | ||||||||
5337311-A-C | 5469270-A-C | ** | ||||||||
5358849-C-A | 5490808-C-A | ** | ||||||||
5372281-T-C | 5504240-T-C | ** | ||||||||
5411908-C-A | 5543867-C-A | ** | ||||||||
5557159-A-G | 5689118-A-G | ** | ||||||||
5606657-A-T | 5738616-A-T | ** | ||||||||
5630051-G-T | 5762010-G-T | ** | ||||||||
5630264-G-T | 5762223-G-T | ** | ||||||||
5658147-A-G | 5790106-A-G | ** | ||||||||
5673057-C-A | 5805016-C-A | ** | ||||||||
5708973-T-C | 5840932-T-C | ** | ||||||||
5785352-C-A | 5917311-C-A | 9×A | ** | |||||||
5796766-A-C | 5928725-A-C | ** | ||||||||
5800548-C-A | 5932507-C-A | ** | ||||||||
5805969-G-T | 5937928-G-T | ** | ||||||||
5859158-G-T | 5991117-G-T | ** | ||||||||
5859297-G-A | 5991256-G-A | ** | ||||||||
5918711-G-T | 6050670-G-T | ** | ||||||||
6422464-G-C | 6554423-G-C | ** | ||||||||
6476803-T-A | 6608762-T-A | ** | ||||||||
6505226-A-G | 6637185-A-G | ** | ||||||||
6505252-A-G | 6637211-A-G | ** | ||||||||
6510828-C-T | 6642787-C-T | FTA34323 | ** | |||||||
6510854-T-C | 6642813-T-C | ** | ||||||||
6634284-C-A | 6766243-C-A | ** | ||||||||
6654078-C-A | 6786037-C-A | ** | ||||||||
6827088-G-T | 6959047-G-T | ** | ||||||||
6911290-C-A | 7043249-C-A | ** | ||||||||
6916088-C-A | 7048047-C-A | ** | ||||||||
6997973-C-A | 7129932-C-A | ** | ||||||||
7029715-GT-G | 7161674-GT-G | ** | ||||||||
7038409-G-C | 7170368-G-C | ** | ||||||||
7094351-C-T | 7226310-C-T | FTB75401 | ** | |||||||
7094396-C-T | 7226355-C-T | ** | ||||||||
7110478-C-A | 7242437-C-A | ** | ||||||||
7166959-A-T | 7298918-A-T | ** | ||||||||
7170819-A-T | 7302778-A-T | ** | ||||||||
7196442-C-A | 7328401-C-A | ** | ||||||||
7210069-C-T | 7342028-C-T | ** | ||||||||
7224281-C-A | 7356240-C-A | ** | ||||||||
7256278-G-T | 7388237-G-T | ** | ||||||||
7320339-C-A | 7452298-C-A | ** | ||||||||
7383876-G-A | 7515835-G-A | ** | ||||||||
7383877-G-A | 7515836-G-A | ** | ||||||||
7578998-A-G | 7710957-A-G | ** | ||||||||
7645481-C-A | 7777440-C-A | ** | ||||||||
7650528-T-G | 7782487-T-G | ** | ||||||||
7996332-G-A | 8128291-G-A | ** | ||||||||
8074838-T-C | 8206797-T-C | ** | ||||||||
8166944-A-T | 8298903-A-T | ** | ||||||||
8295358-C-A | 8427317-C-A | ** | ||||||||
8660378-T-C | 8792337-T-C | ** | ||||||||
9371575-C-A | 9533966-C-A | ** | ||||||||
9509343-G-T | 9671734-G-T | ** | ||||||||
9675067-A-C | 9837458-A-C | IR3_Prx | ** | |||||||
9891013-C-A | 10053404-C-A | ** | ||||||||
9911301-G-A | 10073692-G-A | ** | ||||||||
9952159-C-T | 10114550-C-T | ** | ||||||||
9956429-A-G | 10118820-A-G | ** | ||||||||
9990559-T-A | 10152950-T-A | ** | ||||||||
9990561-T-TC | 10152952-T-TC | ** | ||||||||
10645972-A-G | ** | |||||||||
10655774-T-C | ** | |||||||||
10656372-C-T | FT99768 | ** | ||||||||
10656377-C-T | ** | |||||||||
10658905-A-T | ** | |||||||||
10660785-C-A | ** | |||||||||
10666291-C-A | ** | |||||||||
10668960-T-C | ** | |||||||||
10691943-C-A | ** | |||||||||
10746488-T-A | ** | |||||||||
10752050-C-A | ** | |||||||||
10780415-A-G | ** | |||||||||
10786841-G-A | ** | |||||||||
10796026-T-C | ** | |||||||||
10796782-C-A | ** | |||||||||
10816220-A-C | ** | |||||||||
10816223-A-G | ** | |||||||||
10844516-T-C | ** | |||||||||
10845483-C-A | ** | |||||||||
10861839-C-T | ** | |||||||||
10862650-C-A | ** | |||||||||
10869813-G-T | ** | |||||||||
10869822-G-A | ** | |||||||||
10869838-A-C | ** | |||||||||
10869844-C-G | ** | |||||||||
10873714-T-C | ** | |||||||||
10876683-C-G | ** | |||||||||
10876690-C-G | ** | |||||||||
10876710-C-G | ** | |||||||||
10881692-C-A | ** | |||||||||
10906086-G-T | ** | |||||||||
10907740-C-A | ** | |||||||||
10907768-T-A | ** | |||||||||
10917956-C-A | ** | |||||||||
10927903-C-T | ** | |||||||||
10936416-C-A | ** | |||||||||
10936419-C-G | ** | |||||||||
10941360-T-G | ** | |||||||||
10941566-G-T | ** | |||||||||
10943037-C-T | ** | |||||||||
10943048-ACTTTT-A | ** | |||||||||
10944546-C-A | ** | |||||||||
10951081-C-A | ** | |||||||||
10974078-A-G | ** | |||||||||
10982334-T-C | ** | |||||||||
10984067-G-T | ** | |||||||||
10988851-A-G | ** | |||||||||
10989091-C-A | ** | |||||||||
11009954-A-C | ** | |||||||||
11034593-G-T | ** | |||||||||
13208076-C-A | 11052400-C-A | ** | ||||||||
13252515-G-T | 11096839-G-T | ** | ||||||||
13252519-C-A | 11096843-C-A | ** | ||||||||
13255187-C-T | 11099511-C-T | ** | ||||||||
13290952-T-C | 11135276-T-C | ** | ||||||||
13321601-T-A | 11165925-T-A | ** | ||||||||
13434919-G-C | 11279243-G-C | ** | ||||||||
13460230-T-A | 11304554-T-A | ** | ||||||||
13461536-C-A | 11305860-C-A | ** | ||||||||
13484907-C-A | 11329231-C-A | ** | ||||||||
13556903-G-C | 11401227-G-C | ** | ||||||||
13606676-A-C | 11451000-A-C | ** | ||||||||
13671410-G-T | 11515734-G-T | ** | ||||||||
13705480-G-A | 11549804-G-A | ** | ||||||||
13705491-G-A | 11549815-G-A | ** | ||||||||
11656930-C-G | ** | |||||||||
11670757-C-A | ** | |||||||||
11676420-A-G | ** | |||||||||
13855635-C-A | 11734929-C-A | ** | ||||||||
13858840-G-A | 11738134-G-A | ** | ||||||||
13860904-C-A | 11740198-C-A | FTB86175 | ** | |||||||
14029450-C-A | 11908744-C-A | ** | ||||||||
14030200-G-A | 11909494-G-A | ** | ||||||||
14099953-C-A | 11979247-C-A | ** | ||||||||
14279907-C-G | 12159201-C-G | ** | ||||||||
14279940-C-A | 12159234-C-A | ** | ||||||||
14296893-C-A | 12176187-C-A | ** | ||||||||
14328119-T-C | 12207413-T-C | ** | ||||||||
14380155-T-G | 12259451-T-G | ** | ||||||||
14380187-T-A | 12259483-T-A | ** | ||||||||
14385918-A-G | 12265214-A-G | ** | ||||||||
14427524-T-C | 12306799-T-C | ** | ||||||||
14468158-G-A | 12347427-G-A | ** | ||||||||
14468232-C-G | 12347501-C-G | ** | ||||||||
14488607-T-TA | 12367876-T-TA | 8×A | ** | |||||||
14510023-G-A | 12398228-G-A | ** | ||||||||
14518336-A-G | 12406537-A-G | ** | ||||||||
14549719-C-A | 12437920-C-A | ** | ||||||||
14688722-T-A | 12576788-T-A | ** | ||||||||
14716732-G-A | 12604800-G-A | ** | ||||||||
14727026-A-G | 12615094-A-G | ** | ||||||||
14727035-G-T | 12615103-G-T | ** | ||||||||
14727099-C-G | 12615167-C-G | ** | ||||||||
14743512-A-C | 12631581-A-C | ** | ||||||||
15132001-G-A | 13020088-G-A | ** | ||||||||
15202427-C-T | 13090513-C-T | ** | ||||||||
15427450-T-A | 13315570-T-A | ** | ||||||||
15443600-A-G | 13331720-A-G | ** | ||||||||
15680031-C-A | 13568151-C-A | ** | ||||||||
15685449-A-G | 13573569-A-G | ** | ||||||||
15764048-C-A | 13652168-C-A | ** | ||||||||
15769316-C-A | 13657436-C-A | ** | ||||||||
15791125-C-A | 13679245-C-A | ** | ||||||||
15866025-G-T | 13754145-G-T | ** | ||||||||
15921729-A-T | 13809849-A-T | ** | ||||||||
16028427-C-A | 13916547-C-A | ** | ||||||||
16059927-T-A | 13948047-T-A | ** | ||||||||
16171676-T-C | 14059796-T-C | ** | ||||||||
16213646-C-A | 14101766-C-A | ** | ||||||||
16279357-T-A | 14167477-T-A | ** | ||||||||
16297357-A-TT | 14185477-A-TT | ** | ||||||||
16395433-G-T | 14283553-G-T | ** | ||||||||
16421124-C-A | 14309244-C-A | ** | ||||||||
16926259-C-A | 14814379-C-A | ** | ||||||||
16941612-C-A | 14829732-C-A | ** | ||||||||
16990164-C-G | 14878284-C-G | ** | ||||||||
16990217-C-A | 14878337-C-A | ** | ||||||||
16990252-AAG-A | 14878372-AAG-A | ** | ||||||||
17001701-C-A | 14889821-C-A | ** | ||||||||
17215912-C-G | 15104032-C-G | ** | ||||||||
17246380-G-A | 15134500-G-A | ** | ||||||||
17260316-C-T | 15148436-C-T | ** | ||||||||
17260752-C-A | 15148872-C-A | ** | ||||||||
17323686-G-T | 15211806-G-T | ** | ||||||||
17337983-GT-G | 15226103-GT-G | ** | ||||||||
17433927-C-A | 15322047-C-A | ** | ||||||||
17455447-G-T | 15343567-G-T | ** | ||||||||
17455567-G-A | 15343687-G-A | ** | ||||||||
17535333-C-A | 15423453-C-A | ** | ||||||||
17629858-C-CT | 15517978-C-CT | ** | ||||||||
17786241-T-C | 15674361-T-C | ** | ||||||||
17821983-C-A | 15710103-C-A | ** | ||||||||
17883952-G-A | 15772072-G-A | ** | ||||||||
17886062-A-T | 15774182-A-T | ** | ||||||||
17886138-T-C | 15774258-T-C | ** | ||||||||
17928454-C-A | 15816574-C-A | ** | ||||||||
17951587-A-G | 15839707-A-G | ** | ||||||||
18187227-G-T | 16075347-G-T | ** | ||||||||
18231694-GT-G | 16119814-GT-G | ** | ||||||||
18263777-C-T | 16151897-C-T | ** | ||||||||
18296167-A-G | 16184287-A-G | P6_Prx | ** | |||||||
18296169-T-TA | 16184289-T-TA | P6_Prx | ** | |||||||
18317581-G-C | 16205701-G-C | P6_Prx | ** | |||||||
18317628-T-C | 16205748-T-C | P6_Prx | ** | |||||||
18539245-G-T | 16427365-G-T | ** | ||||||||
18766708-T-C | 16654828-T-C | ** | ||||||||
18768302-C-A | 16656422-C-A | ** | ||||||||
19079077-A-G | 16967197-A-G | ** | ||||||||
19079086-T-C | 16967206-T-C | ** | ||||||||
19097290-A-T | 16985410-A-T | ** | ||||||||
19129567-C-A | 17017687-C-A | ** | ||||||||
19146466-G-A | 17034586-G-A | ** | ||||||||
19246702-A-G | 17134822-A-G | ** | ||||||||
19246884-G-T | 17135004-G-T | ** | ||||||||
19293767-T-C | 17181887-T-C | ** | ||||||||
19298461-C-A | 17186581-C-A | ** | ||||||||
19416600-C-A | 17304720-C-A | ** | ||||||||
19428128-A-G | 17316248-A-G | ** | ||||||||
19428140-GA-G | 17316260-GA-G | ** | ||||||||
19597106-C-T | 17485226-C-T | P5_Prx | ** | |||||||
19924661-A-ATAT | 17812781-A-ATAT | P5_Prx | 20×T | ** | ||||||
20377067-A-G | 18215181-A-G | P5_Dst | ** | |||||||
20433762-AC-A | 18271876-AC-A | P5_Dst | ** | |||||||
20569491-T-C | 18407605-T-C | P5_Dst | ** | |||||||
20634957-T-C | 18473071-T-C | P4_Prx | ** | |||||||
20682249-A-C | 18520363-A-C | P4_Prx | ** | |||||||
21072609-A-G | 18910723-A-G | ** | ||||||||
21091022-T-A | 18929136-T-A | ** | ||||||||
21211369-C-T | 19049483-C-T | ** | ||||||||
21340053-C-A | 19178167-C-A | ** | ||||||||
21361892-C-T | 19200006-C-T | ** | ||||||||
21498701-C-A | 19336815-C-A | ** | ||||||||
21597492-A-C | 19435606-A-C | ** | ||||||||
21698356-T-A | 19536470-T-A | ** | ||||||||
21836591-T-G | 19674705-T-G | ** | ||||||||
21861635-C-G | 19699749-C-G | ** | ||||||||
21949893-C-T | 19788007-C-T | ** | ||||||||
21949898-C-T | 19788012-C-T | ** | ||||||||
22090125-C-A | 19928239-C-A | ** | ||||||||
22203716-T-A | 20041830-T-A | ** | ||||||||
22551170-A-T | 20389284-A-T | ** | ||||||||
22624931-T-G | 20463045-T-G | ** | ||||||||
22625004-T-G | 20463118-T-G | ** | ||||||||
22655024-A-G | 20493138-A-G | ** | ||||||||
22691100-A-G | 20529214-A-G | ** | ||||||||
22810856-C-A | 20648970-C-A | ** | ||||||||
23311251-T-C | 21149365-T-C | ** | ||||||||
23773543-G-T | 21611657-G-T | ** | ||||||||
21754457-G-T | ** | |||||||||
24587835-C-A | 22441688-C-A | P3_t2 | ** | |||||||
24604501-G-T | 22458354-G-T | P3_t2 | ** | |||||||
24673300-T-C | 22527153-T-C | P3_b2 | ** | |||||||
25587243-T-TC | 23441096-T-TC | P1_gr1 | ** | |||||||
26031577-G-T | 23885430-G-T | P1_Y1 | ** | |||||||
26031620-G-C | 23885473-G-C | P1_Y1 | ** | |||||||
26031636-T-C | 23885489-T-C | P1_Y1 | ** | |||||||
26031638-C-A | 23885491-C-A | P1_Y1 | ** | |||||||
26400749-C-T | 24254602-C-T | P1_Y1 | ** | |||||||
27535301-C-A | 25389154-C-A | P1_Y2 | ** | |||||||
28529716-C-A | 26383569-C-A | ** | ||||||||
28545301-G-A | 26399154-G-A | ** | ||||||||
28657516-C-T | 26511369-C-T | ** | ||||||||
28679023-A-G | 26532876-A-G | ** | ||||||||
28724255-C-T | 26578108-C-T | ** | ||||||||
28724263-G-A | 26578116-G-A | ** | ||||||||
28724270-G-A | 26578123-G-A | ** | ||||||||
28724277-C-A | 26578130-C-A | ** | ||||||||
28724280-C-A | 26578133-C-A | ** | ||||||||
28724317-C-A | 26578170-C-A | ** | ||||||||
28724324-C-G | 26578177-C-G | ** | ||||||||
28724345-T-TG | 26578198-T-TG | ** | ||||||||
56824637-G-T | ** | |||||||||
56848520-A-G | ** | |||||||||
56850069-G-T | ** | |||||||||
56851473-T-C | ** | |||||||||
9436-A-G | ** | |||||||||
22281786-C-T | 20119900-C-T | DYZ19 | ** | |||||||
18539202-T-C | 16427322-T-C | ** | ||||||||
27447461-AGT-A | 25301314-AGT-A | P1_Y2 | 10×GT | ** | ||||||
13696653-G-T | 11540977-G-T | ** | ||||||||
10622678-T-C | ** | |||||||||
13466416-A-G | 11310740-A-G | ** | ||||||||
14963345-G-A | 12851420-G-A | ** | ||||||||
18134843-T-C | 16022963-T-C | ** | ||||||||
19591408-G-GTC | 17479528-G-GTC | P5_Prx | 9×T | ** | ||||||
19922856-T-G | 17810976-T-G | P5_Prx | ** | |||||||
20484594-A-G | 18322708-A-G | P5_Dst | ** | |||||||
20978385-AC-A | 18816499-AC-A | P4_Dst | ** | |||||||
22544052-T-C | 20382166-T-C | ** | ||||||||
22856882-T-C | 20694996-T-C | ** | ||||||||
24373565-T-C | 22227418-T-C | ** | ||||||||
28024705-A-AG | 25878558-A-AG | P1_Y2 | ** | |||||||
17919854-AG-A | 15807974-AG-A | *** | ||||||||
13652925-A-G | 11497249-A-G | *** | ||||||||
13652951-T-A | 11497275-T-A | *** | ||||||||
9968280-A-G | 10130671-A-G | *** | ||||||||
7104517-TTC-T | 7236476-TTC-T | *** | ||||||||
22204821-G-A | 20042935-G-A | BY138450 | *** | |||||||
28784530-C-A | 26638383-C-A | *** | ||||||||
13456395-T-C | 11300719-T-C | *** | ||||||||
58975097-A-T | 56828950-A-T | *** | ||||||||
9307861-G-T | 9470252-G-T | *** | ||||||||
9997376-A-C | 10159767-A-C | *** | ||||||||
10019376-G-A | 10181767-G-A | *** | ||||||||
22220375-AC-A | 20058489-AC-A | DYZ19 | *** | |||||||
22296220-A-G | 20134334-A-G | DYZ19 | *** | |||||||
22429844-T-G | 20267958-T-G | DYZ19 | *** | |||||||
22435835-G-C | 20273949-G-C | DYZ19 | *** | |||||||
24125933-C-A | 21979786-C-A | P3_b1 | *** | |||||||
25077149-A-G | 22931002-A-G | g1 | *** | |||||||
25134461-A-C | 22988314-A-C | g1 | *** | |||||||
25134462-G-A | 22988315-G-A | g1 | *** | |||||||
25158943-G-T | 23012796-G-T | g1 | *** | |||||||
25388276-G-A | 23242129-G-A | P2_r2 | *** | |||||||
25820304-T-C | 23674157-T-C | P1_b3 | *** | |||||||
4826445-C-T | 4958404-C-T | FT321827 | *** | |||||||
10808616-C-T | *** | |||||||||
23098848-G-T | 20936962-G-T | *** | ||||||||
10660797-T-C | *** | |||||||||
14253254-CAAAA-C | 12132548-CAAAA-C | 14×A | *** | |||||||
8666756-A-G | 8798715-A-G | *** | ||||||||
10023047-C-A | 10185438-C-A | *** | ||||||||
21446264-C-A | 19284378-C-A | *** | ||||||||
16912539-T-A | 14800659-T-A | *** | ||||||||
58986153-G-C | 56840006-G-C | *** | ||||||||
17375597-C-A | 15263717-C-A | *** | ||||||||
56844866-G-T | *** | |||||||||
21084375-G-GTA | 18922489-G-GTA | *** | ||||||||
3890344-TA-T | 4022303-TA-T | *** | ||||||||
3966997-C-T | 4098956-C-T | *** | ||||||||
7040143-G-T | 7172102-G-T | *** | ||||||||
7177037-G-T | 7308996-G-T | *** | ||||||||
7233034-A-T | 7364993-A-T | *** | ||||||||
8644324-CAAAAAAAAAAAAAAAAA-C,CA | 8776283-CAAAAAAAAAAAAAAAAA-C,CA | 32×A | *** | *** | ||||||
10653061-TC-T | *** | |||||||||
10763243-C-A | *** | |||||||||
10785959-G-T | *** | |||||||||
10821889-C-A,G | *** | |||||||||
10885169-TTCCACTGAAC-T,TTCCACTGCAC | *** | |||||||||
10951696-A-T | *** | |||||||||
10963454-A-T | *** | |||||||||
13578478-C-T | 11422802-C-T | *** | ||||||||
14030664-AT-A,ATT | 11909958-AT-A,ATT | 14×T | *** | |||||||
15921518-C-A | 13809638-C-A | *** | ||||||||
17175315-C-A | 15063435-C-A | *** | ||||||||
17465148-C-A | 15353268-C-A | *** | ||||||||
17923185-C-T | 15811305-C-T | *** | ||||||||
18534181-TAC-T | 16422301-TAC-T | P6_Dst | *** | |||||||
21153607-A-T | 18991721-A-T | *** | ||||||||
23789471-A-G | 21627585-A-G | *** | ||||||||
24893394-G-T | 22747247-G-T | g1 | *** | |||||||
22856982-C-T | 20695096-C-T | *** | ||||||||
13470677-C-T | 11315001-C-T | *** | ||||||||
4983777-CTTT-C,CTT | 5115736-CTTT-C,CTT | 22×T | *** | |||||||
2775162-AT-A | 2907121-AT-A | *** | ||||||||
4422143-G-T | 4554102-G-T | *** | ||||||||
14123537-G-A | 12002831-G-A | *** | ||||||||
16912525-A-G | 14800645-A-G | *** | ||||||||
16912533-A-G | 14800653-A-G | *** | ||||||||
16912545-C-T | 14800665-C-T | *** | ||||||||
22856978-G-C | 20695092-G-C | *** | ||||||||
28720132-CTTTTTT-C,CTTT | 26573985-CTTTTTT-C,CTTT | 24×T | *** | |||||||
56867482-T-TAA | *** | |||||||||
56867495-TTTTTT-T,TTTATA | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.