Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > L513/S215/DF1 > S6365 > L705 > Z16403 > Z16407 > Z17909

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
N29541
BigY2
N29541
6317458-A-G 6449417-A-G IR3_Dst ***A*
18358592-T-C 16246712-T-C P6_Prx ***A*
19798296-C-A 17686416-C-A P5_Prx ***A*
26033508-G-A 23887361-G-A P1_Y1 ***A*
20629832-G-GT 18467946-G-GT P4_Prx 9×TA*
20689804-C-T 18527918-C-T BY212299 P4_Prx A*
20798766-T-A 18636880-T-A BY196760 P4_Prx A*
20774904-G-A 18613018-G-A P4_Prx A*
20689809-A-T 18527923-A-T P4_Prx A*
26201102-A-T 24054955-A-T P1_Y1 A*
6165676-G-A 6297635-G-A IR3_Dst A*
28817847-G-T 26671700-G-T A*
19751290-T-C 17639410-T-C P5_Prx A*
20041956-C-T 17930076-C-T P5_Prx A*
3152180-A-G 3284139-A-G BY41572 +
6931953-G-C 7063912-G-C Y38730Y38730 YY++
2913476-C-T 3045435-C-T BY57286 Y++
7522525-T-C 7654484-T-C BY11255 YY++
15345418-ACT-A 13233537-ACT-A ++
17848314-T-G 15736434-T-G BY117793 YY++
19342400-C-A 17230520-C-A BY55195 YY++
22293693-C-A 20131807-C-A BY46617 DYZ19 ++
22461383-G-T 20299497-G-T DYZ19 +**
23348653-A-G 21186767-A-G BY144750 YY++
23571782-C-T 21409896-C-T YY++
23960180-C-T 21814033-C-T BY148764 Y++
15696020-GT-G 13584140-GT-G BY11275 ++
15156704-C-CA 13044791-C-CA S3201 9×A++
9152345-CA-C 9314736-CA-C 10×A++
15093719-C-A 12981807-C-A BY99692 YY+
19500593-G-GAGAAAGAA 17388713-G-GAGAAAGAA 15×AGAA****
14242408-A-G 12121702-A-G CTS2263 M7148 PF4852 YY*
14226725-C-A 12106019-C-A CTS2231 YY*
9771933-A-T 9934324-A-T Y*
5125964-A-T 5257923-A-T A15651 *
13694850-T-G 11539174-T-G DYZ17 *
22255842-G-C 20093956-G-C DYZ19 *
16157735-G-GAAAGA 14045855-G-GAAAGA P8_Dst 10×AAAGA**
16157791-A-G 14045911-A-G P8_Dst **
5415286-T-TTATCTATC 5547245-T-TTATCTATC 8×TATC**
14456501-CA-C 12335774-CA-C 15×A**
13811204-C-T 11690498-C-T DYZ17 5×AATGG**
24235417-G-TT 22089270-G-TT P3_b1 **
24751255-C-T 22605108-C-T P3_b2 **
7146776-G-T 7278735-G-T 18×T**
21853778-T-A 19691892-T-A BY169953Z21076 YP4448 11×A**
7307627-AAT-A 7439586-AAT-A **
9930253-G-A 10092644-G-A **
22023250-T-G 19861364-T-G **
15878401-C-A 13766521-C-A **
13480421-G-A 11324745-G-A A12171 **
26010351-A-T 23864204-A-T P1_Y1 **
17950825-AATATATATATATATATATATATATATATATATATATATAT-A 15838945-AATATATATATATATATATATATATATATATATATATATAT-A 27×AT**
16108702-C-CTTTAT 13996822-C-CTTTAT P8_Prx 10×TTTCT**
13480325-T-A 11324649-T-A **
13480345-G-A 11324669-G-A **
13811172-T-A 11690466-T-A DYZ17 **
2790303-C-CTT 2922262-C-CTT 15×T**
58979489-A-T 56833342-A-T **
10669524-C-T **
18867368-A-G 16755488-A-G **
9125447-CTTTTT-C **
10747009-A-G **
14073188-T-TC 11952482-T-TC **
6124384-C-A 6256343-C-A **
24884199-C-T 22738052-C-T g1 **
15278953-C-A 13167052-C-A **
15671137-C-A 13559257-C-A 11×T**
21015094-GA-G 18853208-GA-G P4_Dst **
2843149-C-A 2975108-C-A **
13472086-G-C 11316410-G-C **
28773910-G-GA 26627763-G-GA 8×A**
6642945-C-A 6774904-C-A **
9930258-C-G 10092649-C-G **
15410551-A-G 13298671-A-G **
28808616-A-T 26662469-A-T **
17997325-C-A 15885445-C-A P7_Gap **
10993011-T-G **
27861910-C-T 25715763-C-T P1_Y2 **
7145053-C-A 7277012-C-A Y83452 **
3991866-C-A 4123825-C-A **
13811166-A-C 11690460-A-C DYZ17 **
24910921-C-A 22764774-C-A g1 **
24910933-A-T 22764786-A-T g1 **
56832772-T-G **
10653941-C-A **
9799134-C-A 9961525-C-A 24×A**
6775900-CTT-C 6907859-CTT-C 11×T**
10982860-C-A **
28784416-G-C 26638269-G-C **
18847973-C-A 16736093-C-A **
10686698-C-T **
21201317-C-A 19039431-C-A **
13269494-AG-A 11113818-AG-A **
13269513-A-G 11113837-A-G **
26100543-TTGG-T 23954396-TTGG-T P1_Y1 **
10976959-G-T **
13489476-G-T 11333800-G-T **
6784323-A-G 6916282-A-G **
9731618-T-TA 9894009-T-TA IR3_Prx **
19528358-C-A 17416478-C-A **
10912198-C-A **
10912221-A-C **
10851116-C-T **
21187910-C-A 19026024-C-A **
23807577-TCA-T 21645691-TCA-T **
11643662-T-C DYZ17 **
10835448-A-G **
10835449-G-T **
10835480-C-T **
10835482-C-T **
10835485-C-G **
10835487-C-A **
10835512-C-T **
27637233-T-C 25491086-T-C P1_Y2 **
14440832-C-A 12320105-C-A **
3275739-C-A 3407698-C-A FT316667 **
19391191-C-A 17279311-C-A **
24237-G-A **
10937382-T-C **
10937387-T-C **
6873353-C-A 7005312-C-A **
14574136-C-A 12462336-C-A **
15106674-C-A 12994762-C-A **
9444582-A-G 9606973-A-G **
24910925-G-A 22764778-G-A g1 **
10937394-C-CCGTTG **
16514502-C-A 14402622-C-A **
15671135-T-A 13559255-T-A **
10835472-A-C **
28567954-T-C 26421807-T-C **
7294817-CTA-C 7426776-CTA-C **
10033247-G-A 10195638-G-A **
10691210-C-T **
15532996-GA-G 13421116-GA-G 8×A**
20028078-G-A 17916198-G-A P5_Prx **
28542968-C-A 26396821-C-A **
15776743-C-A 13664863-C-A **
20432870-AC-A 18270984-AC-A P5_Dst **
10669489-C-T **
10669510-A-T **
10669528-C-T **
10669529-C-G **
10669538-C-G **
10669545-G-AGGCCC **
10835547-C-T **
10893250-T-A **
7221773-C-A 7353732-C-A **
16860748-GCAAA-G 14748868-GCAAA-G **
10825294-C-CGGGTT **
22125763-C-T 19963877-C-T **
21780506-C-A **
7281134-A-G 7413093-A-G **
10686695-G-A **
23638668-C-A 21476782-C-A **
56831146-T-C **
2909160-T-A 3041119-T-A **
21265239-C-A 19103353-C-A **
21367705-C-T 19205819-C-T **
6791815-T-C 6923774-T-C **
28650054-C-A 26503907-C-A **
10670765-C-A **
18328664-T-A 16216784-T-A P6_Prx **
9566984-TG-T 9729375-TG-T IR3_Prx **
10900789-C-A **
5935307-C-A 6067266-C-A **
16629334-T-C 14517454-T-C **
4075732-G-T 4207691-G-T **
22811647-C-A 20649761-C-A **
20794449-T-TA 18632563-T-TA P4_Prx **
14366804-C-A 12246099-C-A **
13446671-A-C 11290995-A-C **
10825296-A-C **
17741428-C-A 15629548-C-A FT147117 **
11673125-A-G DYZ17 **
13330237-C-A 11174561-C-A **
9877886-C-A 10040277-C-A **
15278958-C-A 13167057-C-A **
15564084-C-A 13452204-C-A **
13567221-C-A 11411545-C-A **
16742924-C-A 14631044-C-A **
14449758-C-A 12329031-C-A **
21299404-C-A 19137518-C-A **
13472233-C-CT 11316557-C-CT **
28485771-C-A 26339624-C-A **
7397628-G-T 7529587-G-T **
16016856-C-A 13904976-C-A **
7197330-C-A 7329289-C-A **
11022894-T-C **
10986711-C-A **
28521067-C-A 26374920-C-A **
10022185-C-A 10184576-C-A **
8288748-T-A 8420707-T-A **
4049640-C-T 4181599-C-T **
3467364-C-A 3599323-C-A **
7757248-C-T 7889207-C-T **
5292248-C-A 5424207-C-A **
22979462-C-A 20817576-C-A **
13811173-G-C 11690467-G-C DYZ17 **
13811193-G-A 11690487-G-A DYZ17 **
13489501-C-T 11333825-C-T **
13881249-C-A 11760543-C-A **
10937406-A-C **
10937411-A-ATGCCT **
21283153-C-A 19121267-C-A **
56832766-A-T **
18184830-C-A 16072950-C-A **
10926675-T-C **
15699886-C-A 13588006-C-A **
7138849-C-A 7270808-C-A **
6791793-A-C 6923752-A-C **
18423854-C-A 16311974-C-A P6_Gap **
7011501-C-T 7143460-C-T **
16369116-C-A 14257236-C-A **
4976784-T-A 5108743-T-A **
27996129-A-AG 25849982-A-AG P1_Y2 **
19062059-C-A 16950179-C-A **
17081311-A-T 14969431-A-T **
20028079-C-T 17916199-C-T P5_Prx **
7519091-C-A 7651050-C-A **
11002129-C-A **
14757786-C-A 12645855-C-A **
11014531-C-A **
15745503-C-A 13633623-C-A **
4688071-C-A 4820030-C-A **
6791828-G-A 6923787-G-A **
5755814-G-T 5887773-G-T **
8556263-T-C 8688222-T-C **
24013815-G-A 21867668-G-A **
2665874-G-C 2797833-G-C **
2665875-TG-A 2797834-TG-A **
2701223-A-C 2833182-A-C **
2770637-C-A 2902596-C-A FTA29857 **
2814809-C-A 2946768-C-A **
2845185-G-A 2977144-G-A **
2845189-T-A 2977148-T-A **
2855484-G-A 2987443-G-A **
3210568-C-A 3342527-C-A **
3521216-G-T 3653175-G-T **
3521317-TG-A 3653276-TG-A **
3521322-C-A 3653281-C-A **
3521331-G-C 3653290-G-C **
3521334-C-T 3653293-C-T **
3640345-G-T 3772304-G-T **
3741401-C-G 3873360-C-G **
3790878-GTATATATATATATATATATA-G 3922837-GTATATATATATATATATATA-G 21×TA**
3824309-G-T 3956268-G-T **
4087844-T-C 4219803-T-C **
4160341-C-T 4292300-C-T **
4201773-A-T 4333732-A-T **
4208245-C-A 4340204-C-A **
4276145-C-T 4408104-C-T **
4433981-G-A 4565940-G-A **
4548013-C-A 4679972-C-A **
4643426-C-A 4775385-C-A **
4702903-T-C 4834862-T-C **
4702904-G-A 4834863-G-A **
4702934-G-A 4834893-G-A **
4781123-C-T 4913082-C-T **
5059659-C-A 5191618-C-A **
5112737-T-C 5244696-T-C **
5231232-C-G 5363191-C-G **
5281144-G-T 5413103-G-T **
5367732-T-G 5499691-T-G **
5449219-T-A 5581178-T-A **
5483169-G-T 5615128-G-T **
5494679-C-A 5626638-C-A **
5601094-G-A 5733053-G-A **
5610293-C-A 5742252-C-A **
5630489-T-C 5762448-T-C **
5702330-T-A 5834289-T-A **
5716270-G-T 5848229-G-T **
5760175-C-A 5892134-C-A **
5865396-A-G 5997355-A-G **
5927403-T-G 6059362-T-G **
5965707-A-C 6097666-A-C **
5991328-C-A 6123287-C-A **
6183284-T-G 6315243-T-G IR3_Dst **
6401771-C-T 6533730-C-T **
6474692-A-G 6606651-A-G **
6474749-A-G 6606708-A-G FGC64725 **
6474795-T-C 6606754-T-C **
6492619-C-A 6624578-C-A **
6516792-A-G 6648751-A-G **
6517973-C-A 6649932-C-A **
6518033-T-C 6649992-T-C **
6732670-G-A 6864629-G-A **
6791801-A-G 6923760-A-G **
6791805-C-G 6923764-C-G **
6808062-G-A 6940021-G-A **
6854452-C-A 6986411-C-A **
6926177-C-A 7058136-C-A **
7011509-T-C 7143468-T-C **
7020259-C-A 7152218-C-A **
7054183-T-C 7186142-T-C **
7134236-C-A 7266195-C-A **
7152745-G-A 7284704-G-A **
7217307-C-A 7349266-C-A **
7225741-C-A 7357700-C-A **
7255137-T-A 7387096-T-A **
7261278-C-A 7393237-C-A **
7269722-A-G 7401681-A-G **
7277580-C-A 7409539-C-A **
7281125-G-C 7413084-G-C **
7281133-C-T 7413092-C-T **
7281139-T-C 7413098-T-C **
7296791-G-A 7428750-G-A **
7306513-A-T 7438472-A-T **
7319951-C-A 7451910-C-A **
7321797-C-A 7453756-C-A **
7360527-C-A 7492486-C-A **
7407354-C-A 7539313-C-A **
7536423-C-A 7668382-C-A **
7564102-T-C 7696061-T-C **
7564108-T-C 7696067-T-C **
7564109-T-C 7696068-T-C **
7564110-G-A 7696069-G-A **
7564116-A-G 7696075-A-G **
7564120-A-G 7696079-A-G **
7608438-T-A 7740397-T-A **
7615456-C-A 7747415-C-A FGC45000 **
7617603-C-G 7749562-C-G **
7617607-G-C 7749566-G-C **
7703983-C-A 7835942-C-A **
7990797-A-T 8122756-A-T **
8077453-A-T 8209412-A-T **
8277854-C-T 8409813-C-T **
8288624-C-A 8420583-C-A **
8343259-C-A 8475218-C-A **
8661795-A-T 8793754-A-T **
8672983-A-G 8804942-A-G **
8748507-T-C 8880466-T-C **
8840531-C-A 8972490-C-A **
8878928-G-T 9010887-G-T **
8988703-G-C 9151094-G-C **
9025141-C-A 9187532-C-A **
9076665-C-T 9239056-C-T **
9321733-T-C 9484124-T-C **
9731634-GA-G 9894025-GA-G IR3_Prx **
9731644-C-T 9894035-C-T IR3_Prx **
9760995-C-A 9923386-C-A **
9766282-A-T 9928673-A-T **
9877289-C-A 10039680-C-A **
9890490-C-A 10052881-C-A **
9952494-A-T 10114885-A-T **
10015905-C-A 10178296-C-A **
10617152-G-T **
10766403-A-C **
10772369-T-A **
10785600-C-A **
10801783-T-C **
10805638-G-T **
10847575-T-A **
10851926-T-G **
11014487-C-T **
11014491-C-A **
11014507-C-CTCTAA **
11022920-T-G **
13202843-G-A 11047167-G-A **
13233621-C-A 11077945-C-A **
13282342-A-G 11126666-A-G **
13309956-C-A 11154280-C-A FT442626 **
13311169-C-A 11155493-C-A **
13456067-T-TCCATA 11300391-T-TCCATA **
13467957-C-A 11312281-C-A **
13484535-C-A 11328859-C-A **
13505052-C-A 11349376-C-A **
13578452-G-A 11422776-G-A **
13593750-C-A 11438074-C-A **
11644754-A-G DYZ17 **
11665966-A-T DYZ17 **
11668645-A-G DYZ17 **
11672435-A-T DYZ17 **
11675704-A-T DYZ17 **
11676477-G-C DYZ17 **
11676486-G-T FT451434 DYZ17 **
11676495-C-T DYZ17 **
11676496-T-G DYZ17 **
11676500-TG-T DYZ17 **
13809243-G-T 11688537-G-T DYZ17 **
13855918-T-C 11735212-T-C DYZ17 **
13855919-G-A 11735213-G-A DYZ17 **
13858217-A-G 11737511-A-G DYZ17 **
13937895-C-A 11817189-C-A **
13958419-C-G 11837713-C-G **
13962157-C-T 11841451-C-T **
13965067-G-A 11844361-G-A **
13974179-C-G 11853473-C-G **
13999342-G-T 11878636-G-T **
14181033-G-A 12060327-G-A **
14184362-T-A 12063656-T-A **
14184364-G-A 12063658-G-A **
14196367-G-T 12075661-G-T **
14196391-G-T 12075685-G-T FTA49893 **
14229307-A-T 12108601-A-T **
14316407-T-C 12195701-T-C **
14356216-C-A 12235511-C-A **
14373617-C-A 12252913-C-A **
14395175-G-T 12274471-G-T **
14398433-C-A 12277729-C-A **
14398466-T-C 12277762-T-C **
14422670-G-A 12301945-G-A **
14482147-C-A 12361416-C-A **
14483881-C-A 12363150-C-A **
14562788-C-A 12450988-C-A **
14602245-C-A 12490447-C-A **
14649663-G-A 12537728-G-A **
14653113-G-T 12541178-G-T **
14807377-C-T 12695448-C-T **
14934344-G-T 12822409-G-T **
14970324-C-A 12858399-C-A **
15113725-C-A 13001812-C-A **
15131783-C-A 13019870-C-A **
15158880-G-T 13046966-G-T **
15197569-T-C 13085655-T-C **
15397964-C-A 13286084-C-A **
15496380-T-A 13384500-T-A **
15496382-AAAAT-A 13384502-AAAAT-A **
15496389-A-ATTTC 13384509-A-ATTTC **
15496403-T-A 13384523-T-A **
15496962-G-A 13385082-G-A **
15496964-T-A 13385084-T-A **
15496968-A-ACG 13385088-A-ACG **
15570918-T-C 13459038-T-C **
15570920-A-G 13459040-A-G **
15729181-C-A 13617301-C-A **
15739756-C-A 13627876-C-A **
15767158-T-C 13655278-T-C **
15767205-C-A 13655325-C-A **
15860353-C-A 13748473-C-A **
15866087-G-A 13754207-G-A **
15866089-C-A 13754209-C-A **
15926738-T-C 13814858-T-C **
15940277-A-C 13828397-A-C **
16003307-C-A 13891427-C-A **
16021189-C-A 13909309-C-A **
16062818-T-A 13950938-T-A **
16092900-C-A 13981020-C-A **
16102024-T-G 13990144-T-G P8_Prx **
16102032-T-TG 13990152-T-TG P8_Prx **
16271160-T-G 14159280-T-G **
16272588-C-A 14160708-C-A **
16318034-T-C 14206154-T-C **
16336941-T-A 14225061-T-A **
16448154-C-A 14336274-C-A **
16462893-C-A 14351013-C-A **
16467554-T-C 14355674-T-C **
16493130-C-T 14381250-C-T **
16506709-G-A 14394829-G-A **
16516412-C-A 14404532-C-A **
16583391-A-G 14471511-A-G **
16598875-CA-T 14486995-CA-T **
16598890-G-GA 14487010-G-GA **
16704874-C-G 14592994-C-G **
16711359-C-A 14599479-C-A **
16719383-C-A 14607503-C-A **
16777841-C-A 14665961-C-A **
17048153-T-A 14936273-T-A **
17048262-C-A 14936382-C-A **
17055960-G-T 14944080-G-T BY112076 **
17100540-G-T 14988660-G-T **
17100544-G-T 14988664-G-T **
17144092-T-C 15032212-T-C **
17165477-C-A 15053597-C-A **
17192877-G-GTT 15080997-G-GTT **
17216009-C-A 15104129-C-A **
17242090-T-C 15130210-T-C **
17269472-G-T 15157592-G-T **
17276907-A-G 15165027-A-G **
17373345-G-T 15261465-G-T **
17425117-C-T 15313237-C-T **
17432764-A-T 15320884-A-T **
17504660-AC-A 15392780-AC-A **
17560586-T-C 15448706-T-C **
17636743-C-A 15524863-C-A **
17682476-A-T 15570596-A-T **
17682483-T-C 15570603-T-C **
17716673-C-A 15604793-C-A **
17753871-C-A 15641991-C-A **
17832588-C-A 15720708-C-A **
17929855-C-A 15817975-C-A **
18119437-C-A 16007557-C-A **
18195302-A-T 16083422-A-T **
18201644-T-C 16089764-T-C **
18284666-C-A 16172786-C-A P6_Prx **
18285988-C-G 16174108-C-G P6_Prx **
18388338-T-C 16276458-T-C P6_Gap **
18402439-C-A 16290559-C-A P6_Gap **
18511492-C-A 16399612-C-A P6_Dst **
18611822-C-A 16499942-C-A **
18717656-C-A 16605776-C-A **
18724013-C-A 16612133-C-A **
18748751-T-C 16636871-T-C **
18756926-T-C 16645046-T-C **
18763761-C-G 16651881-C-G **
18763763-T-C 16651883-T-C **
18790056-T-A 16678176-T-A **
18790068-G-A 16678188-G-A **
18790095-T-A 16678215-T-A **
18790096-C-T 16678216-C-T **
18790106-T-C 16678226-T-C **
18790112-A-C 16678232-A-C **
18790117-T-C 16678237-T-C **
18790120-C-A 16678240-C-A **
18855575-A-T 16743695-A-T **
18873328-C-A 16761448-C-A FTB33939 **
18892423-C-A 16780543-C-A **
18925516-C-A 16813636-C-A **
18925526-T-C 16813646-T-C **
18963876-C-T 16851996-C-T **
18963956-A-T 16852076-A-T **
19000129-C-A 16888249-C-A **
19007839-G-A 16895959-G-A **
19112659-C-A 17000779-C-A **
19126337-G-A 17014457-G-A **
19129048-C-A 17017168-C-A **
19130772-G-C 17018892-G-C **
19449304-G-A 17337424-G-A **
19479181-C-A 17367301-C-A **
19547710-G-A 17435830-G-A **
19547711-G-A 17435831-G-A **
19547721-G-A 17435841-G-A **
19555891-T-G 17444011-T-G **
19646354-A-G 17534474-A-G P5_Prx **
19829430-G-T 17717550-G-T P5_Prx **
19832439-A-T 17720559-A-T P5_Prx **
20200600-T-C 18038714-T-C P5_Dst **
20378499-A-G 18216613-A-G P5_Dst **
20378499-A-ATATACCTAGG 18216613-A-ATATACCTAGG P5_Dst **
20458460-C-G 18296574-C-G FT452645 P5_Dst **
20707749-C-A 18545863-C-A P4_Prx **
20735085-C-G 18573199-C-G P4_Prx **
20839433-C-A 18677547-C-A P4_Gap **
21043919-C-A 18882033-C-A **
21054343-C-A 18892457-C-A **
21111578-C-A 18949692-C-A **
21111781-C-A 18949895-C-A **
21201901-G-T 19040015-G-T **
21275745-T-C 19113859-T-C **
21346737-G-T 19184851-G-T **
21367712-A-G 19205826-A-G **
21638970-G-T 19477084-G-T **
22040837-A-T 19878951-A-T **
22085565-G-A 19923679-G-A **
22170640-C-A 20008754-C-A **
22171144-G-T 20009258-G-T **
22199467-C-A 20037581-C-A **
22237259-A-G 20075373-A-G DYZ19 **
22655054-C-T 20493168-C-T **
22814987-C-A 20653101-C-A **
22875947-C-A 20714061-C-A **
23249366-G-T 21087480-G-T **
23315833-A-T 21153947-A-T **
23792362-A-T 21630476-A-T **
21783898-G-T **
24003148-C-A 21857001-C-A **
24333340-T-TG 22187193-T-TG P3_t1 **
24405011-G-A 22258864-G-A **
24445315-C-A 22299168-C-A **
24472036-A-G 22325889-A-G **
24875563-C-A 22729416-C-A g1 **
24910906-A-ATAAT 22764759-A-ATAAT g1 **
24910919-A-C 22764772-A-C g1 **
25200947-G-T 23054800-G-T g1 **
25995580-G-T 23849433-G-T P1_Y1 **
26005933-A-C 23859786-A-C P1_Y1 **
26234877-TAAAAAAAGAGG-T 24088730-TAAAAAAAGAGG-T P1_Y1 **
26248342-G-T 24102195-G-T P1_Y1 **
26563916-C-A 24417769-C-A P1_g2 **
27715075-G-T 25568928-G-T P1_Y2 **
28500775-A-T 26354628-A-T **
28534390-C-A 26388243-C-A **
28548671-C-A 26402524-C-A **
28622737-G-T 26476590-G-T **
28659431-A-G 26513284-A-G **
28782244-C-A 26636097-C-A **
28784413-A-C 26638266-A-C **
28795726-A-G 26649579-A-G **
56831169-G-A **
56831196-C-G **
56831200-A-G **
56831200-A-ATTTCC **
56831211-T-C **
56831289-C-A **
56833283-C-CTCCTT **
56833312-A-T **
56834614-A-G **
56860969-G-T **
10011992-A-G 10174383-A-G ***
25200847-CAAAGAAAGAAAGAAAG-C 23054700-CAAAGAAAGAAAGAAAG-C g1 15×AAAG***
13663838-C-A 11508162-C-A DYZ17 ***
13137731-G-T 10627217-G-T ***
13140563-C-T 10630049-C-T A13785 ***
13799064-T-A 11678358-T-A DYZ17 ***
9223162-A-C 9385553-A-C ***
9951145-C-A 10113536-C-A ***
9951155-C-T 10113546-C-T ***
13486308-T-G 11330632-T-G ***
13674761-T-TGGA 11519085-T-TGGA DYZ17 ***
13674765-ATTT-A 11519089-ATTT-A DYZ17 ***
13674778-G-A 11519102-G-A DYZ17 ***
13674782-G-A 11519106-G-A DYZ17 ***
13674787-A-T 11519111-A-T DYZ17 ***
13674790-A-G 11519114-A-G DYZ17 ***
13674803-T-G 11519127-T-G DYZ17 ***
13674812-G-C 11519136-G-C DYZ17 ***
13833444-T-A,C 11712738-T-A,C DYZ17 ***
19980000-A-G 17868120-A-G P5_Prx ***
19988767-A-G 17876887-A-G P5_Prx ***
22237333-T-A 20075447-T-A DYZ19 ***
22237342-G-A 20075456-G-A DYZ19 ***
22237352-T-C 20075466-T-C BY25388 DYZ19 ***
22240051-A-G 20078165-A-G DYZ19 ***
24147381-T-G 22001234-T-G P3_b1 ***
25080339-C-T 22934192-C-T g1 ***
25152658-C-T 23006511-C-T g1 ***
58829545-G-A 56761326-C-T ***
58975476-C-T 56829329-C-T ***
58980527-T-TTCCATTCCATTCCAC 56834380-T-TTCCATTCCATTCCAC ***
9771937-G-T 9934328-G-T ***
22204159-C-A 20042273-C-A M2104 Z4969 ***
17673053-C-A 15561173-C-A ***
19206734-C-A 17094854-C-A ***
14765708-C-T 12653777-C-T ***
13449200-A-G 11293524-A-G ***
28784449-T-A 26638302-T-A ***
10785312-C-A ***
15581093-CTTTT-C 13469213-CTTTT-C 16×T***
19075416-C-A 16963536-C-A ***
13464466-G-T 11308790-G-T ***
13464486-C-G 11308810-C-G ***
6714146-G-T 6846105-G-T ***
18806074-C-T 16694194-C-T ***
15352157-C-A 13240276-C-A ***
17479396-CAA-C 15367516-CAA-C 13×A***
2783642-G-A 2915601-G-A 15×A***
2810465-A-T 2942424-A-T ***
27967308-G-A 25821161-G-A P1_Y2 ***
21323429-C-A 19161543-C-A ***
2861516-C-A 2993475-C-A ***
6933402-G-A 7065361-G-A BY62337 ***
9398041-GA-G,GAA 9560432-GA-G,GAA 15×A***
19206740-GTA-G 17094860-GTA-G ***
10958335-A-T ***
13483322-T-C 11327646-T-C ***
8389606-T-C 8521565-T-C ***
2833178-CT-C,CTT 2965137-CT-C,CTT 19×T***
23825065-T-TATA 21663179-T-TATA ***
15866177-T-A 13754297-T-A ***
8799521-C-A 8931480-C-A ***
13212759-C-A 11057083-C-A ***
22483524-A-G 20321638-A-G DYZ19 ***
21202570-C-A 19040684-C-A ***
2892542-ATTTTT-A 3024501-ATTTTT-A 18×T***
8376519-G-GA 8508478-G-GA 9×A***
15810994-T-C 13699114-T-C ***
13470668-C-A 11314992-C-A ***
56827308-G-T ***
18190440-C-A 16078560-C-A Y101582 ***
18190454-C-A 16078574-C-A ***
28784438-A-C 26638291-A-C ***
17534575-C-A 15422695-C-A ***
6803772-C-A 6935731-C-A ***
7163290-A-G 7295249-A-G ***
7263606-C-A 7395565-C-A ***
8629441-C-A 8761400-C-A ***
9079442-A-G 9241833-A-G ***
9166449-T-C 9328840-T-C ***
10034415-C-A 10196806-C-A ***
10785288-C-CAATAA ***
10831554-T-C ***
10916163-G-T ***
10976144-C-A ***
13231279-CT-C 11075603-CT-C ***
13245059-C-A 11089383-C-A ***
13255095-C-A 11099419-C-A ***
13473924-C-A 11318248-C-A ***
13481251-C-A 11325575-C-A ***
13489697-GT-G 11334021-GT-G ***
13676989-C-A 11521313-C-A DYZ17 ***
14006557-C-A 11885851-C-A ***
14424125-C-A 12303400-C-A ***
14607690-G-T 12495892-G-T ***
14723936-C-A 12612004-C-A ***
14772699-A-G 12660768-A-G ***
15778565-C-A 13666685-C-A ***
15810998-T-C 13699118-T-C BY104253 ***
15975099-T-A 13863219-T-A ***
15995726-C-A 13883846-C-A ***
16245958-G-T 14134078-G-T ***
16568299-C-A 14456419-C-A ***
16713199-C-A 14601319-C-A ***
16868582-A-G 14756702-A-G ***
17046332-C-A 14934452-C-A ***
17374357-A-G 15262477-A-G ***
17387271-CATGT-C,CGTGT 15275391-CATGT-C,CGTGT ***
17517047-C-A 15405167-C-A ***
17637638-AACACACAC-A,AACACAC 15525758-AACACACAC-A,AACACAC 21×AC***
18890501-G-A 16778621-G-A ***
21184393-C-A 19022507-C-A ***
21204977-C-A 19043091-C-A ***
21220261-A-T 19058375-A-T ***
21227409-A-C 19065523-A-C ***
23079265-C-A 20917379-C-A ***
23141997-G-T 20980111-G-T ***
23309391-C-A 21147505-C-A ***
28733115-G-T 26586968-G-T ***
28784451-G-A 26638304-G-A ***
28798847-A-G 26652700-A-G ***
56833302-AT-A,AC ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.