Rocca
FGC: 22S11, FTDNA: N90341MDKA Birth: Italy 1559
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FGC 22S11 |
---|---|---|---|---|---|---|---|---|
2743088-T-A | 2875047-T-A | FGC10504 | Y | Y | + | |||
2912440-A-T | 3044399-A-T | FGC10505 | Y | Y | + | |||
3323714-C-T | 3455673-C-T | FGC10506 | + | |||||
3609828-A-G | 3741787-A-G | FGC10507 | + | |||||
3653130-T-G | 3785089-T-G | FGC10508 | + | |||||
4368364-C-T | 4500323-C-T | FGC10509 | + | |||||
4998443-T-C | 5130402-T-C | FGC10511 | + | |||||
6188812-G-A | 6320771-G-A | FGC10515 | IR3_Dst | + | ||||
7149089-A-G | 7281048-A-G | FGC10516 | Y | + | ||||
8303176-G-A | 8435135-G-A | FGC10517 | Y | Y | + | |||
8534545-C-T | 8666504-C-T | FGC10518 | Y | Y | + | |||
8645562-A-G | 8777521-A-G | FGC10519 | Y | Y | + | |||
8812836-G-A | 8944795-G-A | FGC10520 | Y | + | ||||
8892987-A-T | 9024946-A-T | FGC10521 | Y | + | ||||
9806714-A-G | 9969105-A-G | FGC10522 | Y | Y | + | |||
9949071-C-G | 10111462-C-G | FGC10523 | Y | + | ||||
14074184-A-C | 11953478-A-C | FGC10524 | Y | Y | + | |||
14307990-A-T | 12187284-A-T | FGC10525 | Y | Y | + | |||
15209814-A-G | 13097900-A-G | FGC10527 | Y | Y | + | |||
15251356-A-G | 13139442-A-G | FGC10528 | Y | + | ||||
16475065-G-C | 14363185-G-C | FGC10531 | Y | Y | + | |||
16593622-T-G | 14481742-T-G | FGC10532 | Y | Y | + | |||
16786077-G-A | 14674197-G-A | FGC10533 | Y | Y | + | |||
16926410-C-A | 14814530-C-A | FGC10534 | Y | + | ||||
17188974-C-T | 15077094-C-T | FGC10535 | Y | Y | + | |||
17372204-C-T | 15260324-C-T | FGC10536 | Y | Y | + | |||
17391967-C-T | 15280087-C-T | FGC10537 | Y | Y | + | |||
17757782-T-C | 15645902-T-C | FGC10538 | Y | Y | + | |||
17996800-G-A | 15884920-G-A | FGC10539 | P7_Gap | Y | + | |||
18568413-G-C | 16456533-G-C | FGC10540 | Y | Y | + | |||
19077641-G-T | 16965761-G-T | FGC10542 | Y | Y | + | |||
21423312-T-C | 19261426-T-C | FGC10546 | Y | Y | + | |||
21756428-T-C | 19594542-T-C | FGC10547 | Y | Y | + | |||
21819512-C-T | 19657626-C-T | FGC10548 | Y | + | ||||
22233554-G-T | 20071668-G-T | FGC10549 | DYZ19 | + | ||||
23858817-C-T | 21696931-C-T | FGC10553 | Y | + | ||||
24464849-T-C | 22318702-T-C | FGC10555 | Y | + | ||||
3909602-AATT-A | 4041561-AATT-A | + | ||||||
22977356-G-A | 20815470-G-A | FGC10551 | Y | Y | * | |||
2649737-C-A | 2781696-C-A | FGC10503 | Y | * | ||||
4841511-T-G | 4973470-T-G | FGC10510 | * | |||||
5209993-G-A | 5341952-G-A | FGC10512 | * | |||||
5675821-G-A | 5807780-G-A | FGC10513 | * | |||||
5757139-G-A | 5889098-G-A | FGC10514 | * | |||||
15197566-G-A | 13085652-G-A | FGC10526 | Y | Y | * | |||
15295168-T-C | 13183267-T-C | FGC10529 | Y | * | ||||
18885060-G-A | 16773180-G-A | FGC10541 | Y | Y | * | |||
19244794-A-G | 17132914-A-G | FGC10544 | Y | Y | * | |||
19448331-C-A | 17336451-C-A | FGC10545 | Y | Y | * | |||
22691872-C-T | 20529986-C-T | FGC10550 | Y | * | ||||
23709674-T-C | 21547788-T-C | FGC10552 | * | |||||
24422558-C-A | 22276411-C-A | FGC10554 | Y | * | ||||
5673879-T-TG | 5805838-T-TG | * | ||||||
6892709-AT-A | 7024668-AT-A | * | ||||||
15687824-G-GA | 13575944-G-GA | * | ||||||
22229715-G-A | 20067829-G-A | DYZ19 | ** | |||||
22229716-T-C | 20067830-T-C | DYZ19 | ** | |||||
22229717-A-T | 20067831-A-T | DYZ19 | ** | |||||
20326007-C-CTTTTTTTT | 18164121-C-CTTTTTTTT | P5_Dst | 29×T | ** | ||||
25709386-G-GTTTTTTT | 23563239-G-GTTTTTTT | P1_b3 | 31×T | ** | ||||
22227967-G-A | 20066081-G-A | DYZ19 | ** | |||||
13487672-A-AAAACGCGCCGCCC | 11331996-A-AAAACGCGCCGCCC | ** | ||||||
22229755-A-G | 20067869-A-G | FT453300 | DYZ19 | ** | ||||
14063145-CAGATAGAT-C | 11942439-CAGATAGAT-C | 13×AGAT | ** | |||||
22419741-A-T | 20257855-A-T | DYZ19 | ** | |||||
5886050-T-A | 6018009-T-A | Z8453 | ** | |||||
9380712-T-A | 9543103-T-A | FTB50628 | ** | |||||
9380715-C-G | 9543106-C-G | FTB50629 | ** | |||||
9380711-T-C | 9543102-T-C | FTB50627 | ** | |||||
22419690-G-T | 20257804-G-T | DYZ19 | ** | |||||
3112150-T-C | 3244109-T-C | FTB49875 | ** | |||||
9938712-C-T | 10101103-C-T | FGC77754 | ** | |||||
13859764-C-G | 11739058-C-G | FGC77756 | DYZ17 | ** | ||||
17164162-T-C | 15052282-T-C | FGC77757 | ** | |||||
18401139-C-T | 16289259-C-T | FT161013 | P6_Gap | ** | ||||
19086493-T-C | 16974613-T-C | FTB40562 | ** | |||||
19086494-C-A | 16974614-C-A | FTB40563 | ** | |||||
22237483-C-T | 20075597-C-T | DYZ19 | ** | |||||
22430259-G-A | 20268373-G-A | DYZ19 | ** | |||||
6803096-G-GT | 6935055-G-GT | ** | ||||||
8751076-G-GTATA | 8883035-G-GTATA | 10×TA | ** | |||||
9465060-C-CT | 9627451-C-CT | 9×T | ** | |||||
16296452-A-AT | 14184572-A-AT | 9×T | ** | |||||
19547453-C-CAAAAA | 17435573-C-CAAAAA | 24×A | ** | |||||
22739716-C-CAAA | 20577830-C-CAAA | 24×A | ** | |||||
58883026-G-T | 56707845-C-A | *** | ||||||
22503694-G-A | 20341808-G-A | FGC83097 | DYZ19 | *** | ||||
22360334-C-A | 20198448-C-A | DYZ19 | *** | |||||
58913109-C-A | 56677762-G-T | *** | ||||||
13129672-T-C | 10619158-T-C | *** | ||||||
13129674-T-C | 10619160-T-C | *** | ||||||
13730234-C-G | 11574558-C-G | DYZ17 | *** | |||||
22232108-G-A | 20070222-G-A | DYZ19 | *** | |||||
22236408-A-G | 20074522-A-G | DYZ19 | *** | |||||
22236745-T-C | 20074859-T-C | DYZ19 | *** | |||||
22256885-G-C | 20094999-G-C | DYZ19 | *** | |||||
22256886-A-C | 20095000-A-C | DYZ19 | *** | |||||
22289799-C-A | 20127913-C-A | DYZ19 | *** | |||||
22352434-G-T | 20190548-G-T | DYZ19 | *** | |||||
22352436-C-T | 20190550-C-T | DYZ19 | *** | |||||
22352457-G-A | 20190571-G-A | DYZ19 | *** | |||||
22352459-G-T | 20190573-G-T | DYZ19 | *** | |||||
22360135-T-G | 20198249-T-G | DYZ19 | *** | |||||
22503697-T-G | 20341811-T-G | DYZ19 | *** | |||||
22504424-G-C | 20342538-G-C | DYZ19 | *** | |||||
58843776-G-A | 56747095-C-T | *** | ||||||
58861691-C-G | 56729180-G-C | *** | ||||||
13386059-GAAA-G | 11230383-GAAA-G | 10×A | *** | |||||
13482911-ATTC-GTTA | 11327235-ATTC-GTTA | *** | ||||||
22341240-TAGAGTTTGT-CATTGTGTCC | 20179354-TAGAGTTTGT-CATTGTGTCC | DYZ19 | *** | |||||
22352457-GGG-ATT | 20190571-GGG-ATT | DYZ19 | *** | |||||
22435744-TGA-AGC | 20273858-TGA-AGC | DYZ19 | *** | |||||
22496054-AGTGT-TGTGA | 20334168-AGTGT-TGTGA | DYZ19 | *** | |||||
13129615-C-T | 10619101-C-T | *** | ||||||
13129616-T-G | 10619102-T-G | *** | ||||||
13129622-C-G | 10619108-C-G | *** | ||||||
13129623-A-G | 10619109-A-G | *** | ||||||
13734116-G-A | 11578440-G-A | DYZ17 | *** | |||||
22251635-T-G | 20089749-T-G | DYZ19 | *** | |||||
22337291-C-A | 20175405-C-A | DYZ19 | *** | |||||
22337292-C-G | 20175406-C-G | DYZ19 | *** | |||||
22337295-A-T | 20175409-A-T | DYZ19 | *** | |||||
22491429-G-C | 20329543-G-C | DYZ19 | *** | |||||
22495793-C-A | 20333907-C-A | DYZ19 | *** | |||||
22496139-C-G | 20334253-C-G | DYZ19 | *** | |||||
58872956-C-T | 56717915-G-A | *** | ||||||
58872962-A-C | 56717909-T-G | *** | ||||||
58846437-TTCCATTCAAA-T | 56744416-GGAATGGATTT-G | *** | ||||||
13129527-G-A | 10619013-G-A | *** | ||||||
13222389-G-A | 11066713-G-A | A3340 | *** | |||||
13842510-T-A | 11721804-T-A | DYZ17 | *** | |||||
22232111-C-G | 20070225-C-G | DYZ19 | *** | |||||
22250487-G-C | 20088601-G-C | DYZ19 | *** | |||||
22263770-G-A | 20101884-G-A | DYZ19 | *** | |||||
22357251-C-G | 20195365-C-G | DYZ19 | *** | |||||
58843212-G-C | 56747659-C-G | *** | ||||||
22263752-CAATACA-TACTTCC | 20101866-CAATACA-TACTTCC | DYZ19 | *** | |||||
13440731-A-C | 11285055-A-C | *** | ||||||
22309360-T-G | 20147474-T-G | DYZ19 | *** | |||||
22344795-G-A | 20182909-G-A | DYZ19 | *** | |||||
13222867-G-A | 11067191-G-A | *** | ||||||
22236723-G-T | 20074837-G-T | Z3461 | DYZ19 | *** | ||||
22309337-G-T | 20147451-G-T | DYZ19 | *** | |||||
22309366-C-T | 20147480-C-T | DYZ19 | *** | |||||
22344810-G-T | 20182924-G-T | DYZ19 | *** | |||||
22352888-A-T | 20191002-A-T | DYZ19 | *** | |||||
22357354-A-G | 20195468-A-G | DYZ19 | *** | |||||
22364734-G-C | 20202848-G-C | DYZ19 | *** | |||||
22366791-C-T | 20204905-C-T | DYZ19 | *** | |||||
26508288-C-G | 24362141-C-G | P1_Y1 | *** | |||||
58910311-G-T | 56680560-C-A | *** | ||||||
58844025-CA-C | 56746844-AT-A | *** | ||||||
13463838-TTT-GGC | 11308162-TTT-GGC | *** | ||||||
22309319-C-G | 20147433-C-G | DYZ19 | *** | |||||
13475703-G-A | 11320027-G-A | *** | ||||||
20574016-C-A | 18412130-C-A | P5_Dst | *** | |||||
22244984-T-G | 20083098-T-G | DYZ19 | *** | |||||
22309318-G-C | 20147432-G-C | DYZ19 | *** | |||||
22357694-C-A | 20195808-C-A | DYZ19 | *** | |||||
22366433-G-C | 20204547-G-C | DYZ19 | *** | |||||
22366438-G-T | 20204552-G-T | DYZ19 | *** | |||||
22366578-G-T | 20204692-G-T | DYZ19 | *** | |||||
22367160-G-T | 20205274-G-T | DYZ19 | *** | |||||
22309290-CT-C | 20147404-CT-C | DYZ19 | *** | |||||
22309295-C-CT | 20147409-C-CT | DYZ19 | *** | |||||
22309318-GC-CG | 20147432-GC-CG | DYZ19 | *** | |||||
19469890-G-C | 17358010-G-C | *** | ||||||
22366584-G-A | 20204698-G-A | DYZ19 | *** | |||||
13292164-CA-G | 11136488-CA-G | *** | ||||||
13482939-T-A | 11327263-T-A | *** | ||||||
20574069-G-T | 18412183-G-T | P5_Dst | *** | |||||
20574072-C-T | 18412186-C-T | P5_Dst | *** | |||||
20574077-G-A | 18412191-G-A | P5_Dst | *** | |||||
22309523-A-C | 20147637-A-C | DYZ19 | *** | |||||
22435814-C-G | 20273928-C-G | DYZ19 | *** | |||||
58851970-A-G | 56738901-T-C | *** | ||||||
13482952-TC-G | 11327276-TC-G | *** | ||||||
22337322-T-G | 20175436-T-G | DYZ19 | *** | |||||
22360154-G-T | 20198268-G-T | DYZ19 | *** | |||||
20574057-A-G | 18412171-A-G | P5_Dst | *** | |||||
22364523-T-A | 20202637-T-A | DYZ19 | *** | |||||
22364560-C-G | 20202674-C-G | DYZ19 | *** | |||||
22421286-G-T | 20259400-G-T | DYZ19 | *** | |||||
22421287-A-T | 20259401-A-T | DYZ19 | *** | |||||
58870180-TG-AT | 56720690-CA-AT | *** | ||||||
15491908-G-T | 13380028-G-T | *** | ||||||
58843700-C-G | 56747171-G-C | *** | ||||||
13483583-TA-GC | 11327907-TA-GC | *** | ||||||
13462155-AGCC-GGCT | 11306479-AGCC-GGCT | *** | ||||||
27651806-GAAAG-AAAAA | 25505659-GAAAG-AAAAA | P1_Y2 | *** | |||||
22341143-G-T | 20179257-G-T | DYZ19 | *** | |||||
58830798-T-C | 56760073-A-G | *** | ||||||
58851915-T-C | 56738956-A-G | *** | ||||||
58910250-A-T | 56680621-T-A | *** | ||||||
10019077-AAT-GAC | 10181468-AAT-GAC | *** | ||||||
58831538-TTTCC-ATTCA | 56759329-GGAAA-TGAAT | *** | ||||||
58917663-N-C | 56673208-N-G | *** | ||||||
58916643-G-A | 56674228-C-T | *** | ||||||
20242479-T-G | 18080593-T-G | P5_Dst | 12×G | *** | ||||
26499952-A-G | 24353805-A-G | P1_Y1 | 20×T | *** | ||||
58917661-N-A | 56673210-N-T | *** | ||||||
58917662-N-T | 56673209-N-A | *** | ||||||
9320569-ACACACACACACA-T | 9482960-ACACACACACACA-T | *** | ||||||
9432005-GAATCCT-CCAGCATCATAA | 9594396-GAATCCT-CCAGCATCATAA | *** | ||||||
28478036-TAT-GAG | 26331889-TAT-GAG | *** | ||||||
9950612-G-T | 10113003-G-T | *** | ||||||
58917664-N-G | 56673207-N-C | *** | ||||||
22337346-T-A | 20175460-T-A | DYZ19 | *** | |||||
22481762-G-C | 20319876-G-C | DYZ19 | *** | |||||
13445362-CAAAAAAA-C | 11289686-CAAAAAAA-C | 15×A | *** | |||||
22226532-CAAA-AAAT | 20064646-CAAA-AAAT | DYZ19 | *** | |||||
24388090-A-ATC | 22241943-A-ATC | *** | ||||||
22234939-C-A | 20073053-C-A | DYZ19 | *** | |||||
22293088-T-G | 20131202-T-G | DYZ19 | *** | |||||
58882545-T-G | 56708326-A-C | *** | ||||||
28804549-A-G | 26658402-A-G | *** | ||||||
22282019-G-A | 20120133-G-A | DYZ19 | *** | |||||
22421536-C-T | 20259650-C-T | DYZ19 | *** | |||||
22421538-G-A | 20259652-G-A | DYZ19 | *** | |||||
58882027-G-C | 56708844-C-G | *** | ||||||
58882046-CTCC-TTCA | 56708822-GGAG-TGAA | *** | ||||||
3902534-A-T | 4034493-A-T | *** | ||||||
3167207-C-A | 3299166-C-A | *** | ||||||
22337305-G-T | 20175419-G-T | DYZ19 | *** | |||||
22421313-T-A | 20259427-T-A | DYZ19 | *** | |||||
58917660-N-G | 56673211-N-C | *** | ||||||
58840442-CTTCCA-GTTGCATTTT | 56750424-TGGAAG-AAAATGCAAC | *** | ||||||
58848553-GTCATT-G | 56742312-GAATGA-G | *** | ||||||
58917656-CNN-C | *** | |||||||
13733946-G-A | 11578270-G-A | DYZ17 | *** | |||||
13143807-CTCCATTCCAT-C | 10633293-CTCCATTCCAT-C | 10×TCCAT | *** | |||||
22352591-T-C | 20190705-T-C | S3090 | DYZ19 | *** | ||||
22502688-G-A | 20340802-G-A | DYZ19 | *** | |||||
22502691-C-G | 20340805-C-G | DYZ19 | *** | |||||
58843217-T-A | 56747654-A-T | *** | ||||||
17463321-T-TTATA | 15351441-T-TTATA | 14×TA | *** | |||||
58879732-T-A | 56711139-A-T | *** | ||||||
28761382-C-CAAA | 26615235-C-CAAA | 31×A | *** | |||||
22273691-C-T | 20111805-C-T | DYZ19 | *** | |||||
13616457-G-T | 11460781-G-T | *** | ||||||
22293093-G-A | 20131207-G-A | DYZ19 | *** | |||||
22365618-GC-TG | 20203732-GC-TG | DYZ19 | *** | |||||
58917665-N-G | 56673206-N-C | *** | ||||||
22419797-A-G | 20257911-A-G | FGC13014 | FGC13043 | DYZ19 | *** | |||
58835705-CTCC-TTCA | 56755163-GGAG-TGAA | *** | ||||||
22293035-T-C | 20131149-T-C | DYZ19 | *** | |||||
58838389-A-C | 56752482-T-G | *** | ||||||
27575934-CTTTTTT-C | 25429787-CTTTTTT-C | P1_Y2 | 19×T | *** | ||||
13223034-T-G | 11067358-T-G | *** | ||||||
22247198-A-G | 20085312-A-G | DYZ19 | *** | |||||
22247202-T-C | 20085316-T-C | DYZ19 | *** | |||||
22419782-T-C | 20257896-T-C | DYZ19 | *** | |||||
22247236-A-G | 20085350-A-G | DYZ19 | *** | |||||
22419820-C-T | 20257934-C-T | DYZ19 | *** | |||||
22419831-A-T | 20257945-A-T | DYZ19 | *** | |||||
58910260-T-G | 56680611-A-C | *** | ||||||
13480641-TGC-AGG | 11324965-TGC-AGG | *** | ||||||
22299808-TAA-GAG | 20137922-TAA-GAG | DYZ19 | *** | |||||
9944214-ACATC-GCATT | 10106605-ACATC-GCATT | *** | ||||||
13483708-CA-C | 11328032-CA-C | *** | ||||||
22247198-ACTGT-GCTGC | 20085312-ACTGT-GCTGC | DYZ19 | *** | |||||
22299818-CCAGTCCGTTACGGTG-GCAGACCTTTAAGGTA | 20137932-CCAGTCCGTTACGGTG-GCAGACCTTTAAGGTA | DYZ19 | *** | |||||
22419782-TTCACT-CTGACC | 20257896-TTCACT-CTGACC | DYZ19 | *** | |||||
22420108-ATTCG-CTTCA | 20258222-ATTCG-CTTCA | DYZ19 | *** | |||||
22332804-C-A | 20170918-C-A | DYZ19 | *** | |||||
58825356-G-A | 56765515-C-T | *** | ||||||
22495902-A-G | 20334016-A-G | DYZ19 | *** | |||||
13487635-TGCT-CGCG | 11331959-TGCT-CGCG | *** | ||||||
22495925-AGTGAGTGT-GGTGTGTGA | 20334039-AGTGAGTGT-GGTGTGTGA | DYZ19 | *** | |||||
20574008-G-A | 18412122-G-A | P5_Dst | *** | |||||
20574092-A-C | 18412206-A-C | P5_Dst | *** | |||||
20574093-G-T | 18412207-G-T | P5_Dst | *** | |||||
22367045-T-G | 20205159-T-G | DYZ19 | *** | |||||
58842347-T-A | 56748524-A-T | *** | ||||||
58842356-T-A | 56748515-A-T | *** | ||||||
58842357-T-A | 56748514-A-T | *** | ||||||
58842358-T-G | 56748513-A-C | *** | ||||||
20574118-T-C | 18412232-T-C | P5_Dst | *** | |||||
28336668-C-CAAAA | 26190521-C-CAAAA | P1_b4 | 31×A | *** | ||||
22282008-T-A | 20120122-T-A | DYZ19 | *** | |||||
22282012-T-A | 20120126-T-A | DYZ19 | *** | |||||
58854265-T-A | 56736606-A-T | *** | ||||||
58912505-C-T | 56678366-G-A | *** | ||||||
58912510-C-T | 56678361-G-A | *** | ||||||
22281902-ATTTCCTTTCT-TGTTTCTTCAA | 20120016-ATTTCCTTTCT-TGTTTCTTCAA | DYZ19 | *** | |||||
10013077-AGC-GGT | 10175468-AGC-GGT | *** | ||||||
58854260-T-G | 56736611-A-C | *** | ||||||
13199164-C-CAAAAAA | 11043488-C-CAAAAAA | 18×A | *** | |||||
22365980-GG-TA | 20204094-GG-TA | DYZ19 | *** | |||||
16074806-A-T | 13962926-A-T | *** | ||||||
16074807-C-T | 13962927-C-T | *** | ||||||
22344838-A-T | 20182952-A-T | DYZ19 | *** | |||||
22344851-C-T | 20182965-C-T | DYZ19 | *** | |||||
13483502-C-CA | 11327826-C-CA | *** | ||||||
13483505-CT-AG | 11327829-CT-AG | *** | ||||||
27651806-G-A | 25505659-G-A | P1_Y2 | *** | |||||
58916628-C-A | 56674243-G-T | *** | ||||||
58916638-A-T | 56674233-T-A | *** | ||||||
4098639-CA-C | 4230598-CA-C | 20×A | *** | |||||
3706709-C-G | 3838668-C-G | *** | ||||||
6765637-TC-T | 6897596-TC-T | *** | ||||||
13222827-A-G | 11067151-A-G | *** | ||||||
13387180-G-A | 11231504-G-A | *** | ||||||
13482640-C-A | 11326964-C-A | *** | ||||||
22014410-C-T | 19852524-C-T | *** | ||||||
22252172-T-A | 20090286-T-A | DYZ19 | *** | |||||
22425479-G-A | 20263593-G-A | DYZ19 | *** | |||||
23518998-C-A | 21357112-C-A | *** | ||||||
23520037-G-C | 21358151-G-C | *** | ||||||
24491355-T-C | 22345208-T-C | *** | ||||||
28610464-C-T | 26464317-C-T | *** | ||||||
13704721-C-A | 11549045-C-A | DYZ17 | *** | |||||
58820493-A-T | 56770378-T-A | *** | ||||||
13487612-AT-CC | 11331936-AT-CC | *** | ||||||
22421464-C-T | 20259578-C-T | DYZ19 | *** | |||||
13725226-G-A | 11569550-G-A | DYZ17 | *** | |||||
58910240-T-TC | 56680630-A-AG | *** | ||||||
22342618-G-A | 20180732-G-A | DYZ19 | *** | |||||
22337320-T-G | 20175434-T-G | DYZ19 | *** | |||||
58843762-T-A | 56747109-A-T | *** | ||||||
58843759-CCATTA-ACAATC | 56747107-TAATGG-GATTGT | *** | ||||||
22341803-T-A | 20179917-T-A | DYZ19 | *** | |||||
22341804-A-G | 20179918-A-G | DYZ19 | *** | |||||
22341805-C-T | 20179919-C-T | DYZ19 | *** | |||||
13389651-GTA-G | 11233975-GTA-G | 8×TA | *** | |||||
23519008-C-G | 21357122-C-G | *** | ||||||
26010344-T-G | 23864197-T-G | P1_Y1 | *** | |||||
10028266-G-C | 10190657-G-C | *** | ||||||
13740771-T-A | 11585095-T-A | DYZ17 | *** | |||||
22337314-G-T | 20175428-G-T | DYZ19 | *** | |||||
22309553-T-G | 20147667-T-G | DYZ19 | *** | |||||
17994805-G-A | 15882925-G-A | P7_Prx | *** | |||||
28086215-ACCCA-CCCCC | 25940068-ACCCA-CCCCC | P1_Y2 | *** | |||||
22293338-TAAATT-GAAAGA | 20131452-TAAATT-GAAAGA | DYZ19 | *** | |||||
58849022-G-C | 56741849-C-G | *** | ||||||
13475526-AGTTC-GGTTA | 11319850-AGTTC-GGTTA | *** | ||||||
58823078-T-A | 56767793-A-T | *** | ||||||
22229746-G-GC | 20067860-G-GC | DYZ19 | *** | |||||
13485203-C-T | 11329527-C-T | *** | ||||||
21084437-A-T | 18922551-A-T | F23868 | 12×T | *** | ||||
13483560-A-G | 11327884-A-G | *** | ||||||
22282129-T-C | 20120243-T-C | DYZ19 | *** | |||||
13485169-T-C | 11329493-T-C | *** | ||||||
22342609-C-A | 20180723-C-A | DYZ19 | *** | |||||
13485174-T-A | 11329498-T-A | *** | ||||||
13485166-G-T | 11329490-G-T | *** | ||||||
22342627-G-T | 20180741-G-T | DYZ19 | *** | |||||
22342628-T-A | 20180742-T-A | DYZ19 | *** | |||||
15248059-C-T | 13136145-C-T | *** | ||||||
58848790-A-T | 56742081-T-A | *** | ||||||
13464268-A-G | 11308592-A-G | *** | ||||||
13487613-T-C | 11331937-T-C | *** | ||||||
22252180-G-A | 20090294-G-A | DYZ19 | *** | |||||
22353013-G-T | 20191127-G-T | DYZ19 | *** | |||||
3952718-A-T | 4084677-A-T | *** | ||||||
4063686-C-T | 4195645-C-T | *** | ||||||
6165709-G-A | 6297668-G-A | IR3_Dst | *** | |||||
6165714-C-A | 6297673-C-A | IR3_Dst | *** | |||||
6165718-T-A | 6297677-T-A | IR3_Dst | *** | |||||
6380401-G-A | 6512360-G-A | *** | ||||||
6380402-C-A | 6512361-C-A | *** | ||||||
6380407-A-T | 6512366-A-T | *** | ||||||
6380440-G-T | 6512399-G-T | *** | ||||||
6724675-A-T | 6856634-A-T | *** | ||||||
8065741-C-T | 8197700-C-T | *** | ||||||
8353311-G-T | 8485270-G-T | *** | ||||||
9302453-G-A | 9464844-G-A | *** | ||||||
9342984-G-A | 9505375-G-A | *** | ||||||
9702657-G-A | 9865048-G-A | IR3_Prx | *** | |||||
9702661-A-T | 9865052-A-T | IR3_Prx | *** | |||||
9722742-T-A | 9885133-T-A | IR3_Prx | *** | |||||
9802904-G-T | 9965295-G-T | *** | ||||||
10025440-A-G | 10187831-A-G | *** | ||||||
10092021-C-T | 10254412-C-T | *** | ||||||
10092415-G-T | 10254806-G-T | *** | ||||||
10092458-A-G | 10254849-A-G | *** | ||||||
10092467-A-T | 10254858-A-T | *** | ||||||
10092479-G-A | 10254870-G-A | *** | ||||||
10092484-G-A | 10254875-G-A | *** | ||||||
10092491-G-A | 10254882-G-A | *** | ||||||
10092494-A-G | 10254885-A-G | *** | ||||||
10092497-T-G | 10254888-T-G | *** | ||||||
10092501-G-A | 10254892-G-A | *** | ||||||
13222820-G-A | 11067144-G-A | *** | ||||||
13222839-G-A | 11067163-G-A | *** | ||||||
13222860-G-T | 11067184-G-T | *** | ||||||
13223600-G-A | 11067924-G-A | FT92628 | *** | |||||
13334822-G-A | 11179146-G-A | *** | ||||||
13334838-C-T | 11179162-C-T | *** | ||||||
13351809-T-A | 11196133-T-A | *** | ||||||
13470330-T-C | 11314654-T-C | *** | ||||||
13470758-G-T | 11315082-G-T | *** | ||||||
13470764-C-G | 11315088-C-G | *** | ||||||
13482773-G-A | 11327097-G-A | *** | ||||||
13483086-A-C | 11327410-A-C | *** | ||||||
13483089-C-T | 11327413-C-T | FGC46958 | FGC46952 | *** | ||||
13483536-G-C | 11327860-G-C | *** | ||||||
13483551-C-G | 11327875-C-G | *** | ||||||
13483556-T-A | 11327880-T-A | *** | ||||||
13483557-T-G | 11327881-T-G | *** | ||||||
13483558-A-C | 11327882-A-C | *** | ||||||
13483987-C-T | 11328311-C-T | A20600 | *** | |||||
13487740-C-A | 11332064-C-A | *** | ||||||
13725205-C-T | 11569529-C-T | DYZ17 | *** | |||||
13725211-G-A | 11569535-G-A | DYZ17 | *** | |||||
13728263-T-A | 11572587-T-A | DYZ17 | *** | |||||
13979495-T-C | 11858789-T-C | *** | ||||||
14111046-A-G | 11990340-A-G | *** | ||||||
14473246-G-A | 12352515-G-A | *** | ||||||
14491221-G-C | *** | |||||||
15248045-G-A | 13136131-G-A | *** | ||||||
15639686-G-A | 13527806-G-A | *** | ||||||
17225316-T-C | 15113436-T-C | *** | ||||||
17994803-G-A | 15882923-G-A | P7_Prx | *** | |||||
18504739-T-A | 16392859-T-A | P6_Dst | *** | |||||
18990904-A-G | 16879024-A-G | *** | ||||||
19542055-A-G | 17430175-A-G | *** | ||||||
19625982-C-T | 17514102-C-T | P5_Prx | *** | |||||
19625986-C-T | 17514106-C-T | P5_Prx | *** | |||||
19625993-T-C | 17514113-T-C | P5_Prx | *** | |||||
19626006-T-C | 17514126-T-C | P5_Prx | *** | |||||
19626016-A-G | 17514136-A-G | P5_Prx | *** | |||||
19626020-T-A | 17514140-T-A | P5_Prx | *** | |||||
19626089-C-G | 17514209-C-G | P5_Prx | *** | |||||
19626093-G-A | 17514213-G-A | P5_Prx | *** | |||||
19626124-G-A | 17514244-G-A | P5_Prx | *** | |||||
19626127-G-C | 17514247-G-C | P5_Prx | *** | |||||
19626138-G-A | 17514258-G-A | P5_Prx | *** | |||||
19626153-C-T | 17514273-C-T | P5_Prx | *** | |||||
19671224-C-A | 17559344-C-A | P5_Prx | *** | |||||
19813143-A-G | 17701263-A-G | P5_Prx | *** | |||||
20021848-C-A | 17909968-C-A | P5_Prx | *** | |||||
20021867-T-A | 17909987-T-A | P5_Prx | *** | |||||
20021885-T-A | 17910005-T-A | P5_Prx | *** | |||||
20021890-A-T | 17910010-A-T | P5_Prx | *** | |||||
20574143-G-A | 18412257-G-A | P5_Dst | *** | |||||
20594269-T-A | 18432383-T-A | P5_Dst | *** | |||||
20594290-T-A | 18432404-T-A | P5_Dst | *** | |||||
20686687-T-A | 18524801-T-A | P4_Prx | *** | |||||
20686688-T-A | 18524802-T-A | P4_Prx | *** | |||||
20686694-C-G | 18524808-C-G | P4_Prx | *** | |||||
20950929-A-T | 18789043-A-T | P4_Dst | *** | |||||
20950930-G-T | 18789044-G-T | P4_Dst | *** | |||||
20950943-C-T | 18789057-C-T | P4_Dst | *** | |||||
20950945-G-T | 18789059-G-T | P4_Dst | *** | |||||
20950954-T-G | 18789068-T-G | P4_Dst | *** | |||||
20950959-C-T | 18789073-C-T | P4_Dst | *** | |||||
20950960-C-T | 18789074-C-T | P4_Dst | *** | |||||
21198752-C-T | 19036866-C-T | *** | ||||||
21376388-C-T | 19214502-C-T | *** | ||||||
22232057-A-T | 20070171-A-T | DYZ19 | *** | |||||
22232074-C-G | 20070188-C-G | DYZ19 | *** | |||||
22247527-T-G | 20085641-T-G | DYZ19 | *** | |||||
22251756-T-C | 20089870-T-C | DYZ19 | *** | |||||
22251795-C-G | 20089909-C-G | DYZ19 | *** | |||||
22251824-G-A | 20089938-G-A | DYZ19 | *** | |||||
22252122-A-T | 20090236-A-T | DYZ19 | *** | |||||
22252129-G-A | 20090243-G-A | DYZ19 | *** | |||||
22252134-T-C | 20090248-T-C | DYZ19 | *** | |||||
22263752-C-T | 20101866-C-T | DYZ19 | *** | |||||
22263758-A-C | 20101872-A-C | DYZ19 | *** | |||||
22309568-G-C | 20147682-G-C | DYZ19 | *** | |||||
22309587-G-T | 20147701-G-T | DYZ19 | *** | |||||
22309604-C-T | 20147718-C-T | DYZ19 | *** | |||||
22309610-T-G | 20147724-T-G | DYZ19 | *** | |||||
22309616-C-T | 20147730-C-T | DYZ19 | *** | |||||
22309623-C-A | 20147737-C-A | DYZ19 | *** | |||||
22332807-G-A | 20170921-G-A | DYZ19 | *** | |||||
22337348-A-T | 20175462-A-T | DYZ19 | *** | |||||
22337355-C-A | 20175469-C-A | DYZ19 | *** | |||||
22338348-T-C | 20176462-T-C | DYZ19 | *** | |||||
22338349-T-A | 20176463-T-A | DYZ19 | *** | |||||
22338357-G-C | 20176471-G-C | DYZ19 | *** | |||||
22344828-T-A | 20182942-T-A | DYZ19 | *** | |||||
22344831-T-G | 20182945-T-G | DYZ19 | *** | |||||
22360158-T-G | 20198272-T-G | DYZ19 | *** | |||||
22360307-T-A | 20198421-T-A | DYZ19 | *** | |||||
22419784-C-G | 20257898-C-G | FGC57165 | DYZ19 | *** | ||||
22496287-T-A | 20334401-T-A | DYZ19 | *** | |||||
22636975-G-A | 20475089-G-A | *** | ||||||
24921451-G-A | 22775304-G-A | g1 | *** | |||||
24921539-T-C | 22775392-T-C | g1 | *** | |||||
25528767-G-A | 23382620-G-A | P1_gr1 | *** | |||||
25802701-A-T | 23656554-A-T | P1_b3 | *** | |||||
26010256-A-G | 23864109-A-G | P1_Y1 | *** | |||||
26010258-A-G | 23864111-A-G | P1_Y1 | *** | |||||
26048155-G-A | 23902008-G-A | P1_Y1 | *** | |||||
26247769-C-T | 24101622-C-T | P1_Y1 | *** | |||||
27173698-G-T | 25027551-G-T | P1_g3 | *** | |||||
27173702-T-A | 25027555-T-A | P1_g3 | *** | |||||
27173710-G-A | 25027563-G-A | P1_g3 | *** | |||||
27173726-C-A | 25027579-C-A | P1_g3 | *** | |||||
27173736-G-T | 25027589-G-T | P1_g3 | *** | |||||
27173737-C-T | 25027590-C-T | P1_g3 | *** | |||||
27173738-A-T | 25027591-A-T | P1_g3 | *** | |||||
27337036-G-A | 25190889-G-A | P1_g3 | *** | |||||
27337053-G-A | 25190906-G-A | P1_g3 | *** | |||||
27337062-G-A | 25190915-G-A | P1_g3 | *** | |||||
27337075-T-A | 25190928-T-A | P1_g3 | *** | |||||
27337076-C-G | 25190929-C-G | P1_g3 | *** | |||||
27337080-A-T | 25190933-A-T | P1_g3 | *** | |||||
27337094-C-T | 25190947-C-T | P1_g3 | *** | |||||
27370553-T-C | 25224406-T-C | P1_g3 | *** | |||||
27398536-G-A | 25252389-G-A | P1_g3 | *** | |||||
27499437-G-C | 25353290-G-C | P1_Y2 | *** | |||||
27818350-T-C | 25672203-T-C | P1_Y2 | *** | |||||
27902499-C-A | 25756352-C-A | P1_Y2 | *** | |||||
27902500-T-A | 25756353-T-A | P1_Y2 | *** | |||||
27902505-C-A | 25756358-C-A | P1_Y2 | *** | |||||
27902506-T-A | 25756359-T-A | P1_Y2 | *** | |||||
27902508-C-A | 25756361-C-A | P1_Y2 | *** | |||||
27902514-G-A | 25756367-G-A | P1_Y2 | *** | |||||
27902520-C-T | 25756373-C-T | P1_Y2 | *** | |||||
27902533-A-T | 25756386-A-T | P1_Y2 | *** | |||||
27902536-C-T | 25756389-C-T | P1_Y2 | *** | |||||
27906012-C-A | 25759865-C-A | P1_Y2 | *** | |||||
28014410-T-A | 25868263-T-A | P1_Y2 | *** | |||||
28113004-G-A | 25966857-G-A | P1_Y2 | *** | |||||
28120791-G-A | 25974644-G-A | P1_b4 | *** | |||||
28133402-A-T | 25987255-A-T | P1_b4 | *** | |||||
28133413-A-T | 25987266-A-T | P1_b4 | *** | |||||
28133414-A-T | 25987267-A-T | P1_b4 | *** | |||||
28133416-A-T | 25987269-A-T | P1_b4 | *** | |||||
28133417-A-T | 25987270-A-T | P1_b4 | *** | |||||
28133435-A-T | 25987288-A-T | P1_b4 | *** | |||||
28133436-A-T | 25987289-A-T | P1_b4 | *** | |||||
28133437-C-T | 25987290-C-T | P1_b4 | *** | |||||
28437138-T-A | 26290991-T-A | P1_gr2 | *** | |||||
28491346-G-A | 26345199-G-A | *** | ||||||
58819453-C-T | 56771418-G-A | *** | ||||||
58823162-C-T | 56767709-G-A | *** | ||||||
58823192-C-T | 56767679-G-A | *** | ||||||
58823535-C-A | 56767336-G-T | *** | ||||||
58825375-G-C | 56765496-C-G | *** | ||||||
58827629-G-C | 56763242-C-G | *** | ||||||
58827634-T-A | 56763237-A-T | *** | ||||||
58833119-A-T | 56757752-T-A | *** | ||||||
58840410-C-T | 56750461-G-A | *** | ||||||
58842363-C-T | 56748508-G-A | *** | ||||||
58843754-C-T | 56747117-G-A | *** | ||||||
58847905-G-T | 56742966-C-A | *** | ||||||
58847938-T-C | 56742933-A-G | *** | ||||||
58851736-T-A | 56739135-A-T | *** | ||||||
58851758-C-A | 56739113-G-T | *** | ||||||
58870598-C-T | 56720273-G-A | *** | ||||||
58875146-A-G | 56715725-T-C | *** | ||||||
58882733-C-A | 56708138-G-T | *** | ||||||
58894626-A-T | 56696245-T-A | *** | ||||||
58898973-T-C | 56691898-A-G | *** | ||||||
58912488-C-T | 56678383-G-A | *** | ||||||
58912503-C-G | 56678368-G-C | *** | ||||||
22537291-G-AA | 20375405-G-AA | *** | ||||||
22342627-GT-TA | 20180741-GT-TA | DYZ19 | *** | |||||
9380711-TTTTC-CATTG | 9543102-TTTTC-CATTG | *** | ||||||
2805552-G-AA | 2937511-G-AA | *** | ||||||
13466672-CT-C | 11310996-CT-C | *** | ||||||
3483665-CAC-TAT | 3615624-CAC-TAT | *** | ||||||
4071991-A-AAC | 4203950-A-AAC | 14×AC | *** | |||||
4583052-T-TTTTA | 4715011-T-TTTTA | *** | ||||||
5770338-C-CTTTTT | 5902297-C-CTTTTT | 25×T | *** | |||||
5886195-C-TT | 6018154-C-TT | *** | ||||||
6026642-TTGTC-T | 6158601-TTGTC-T | *** | ||||||
8479399-C-CTTTT | 8611358-C-CTTTT | 18×T | *** | |||||
9784760-AT-A | 9947151-AT-A | *** | ||||||
10034745-TCCCACCG-CCCCCCCC | 10197136-TCCCACCG-CCCCCCCC | *** | ||||||
13140106-TT-AC | 10629592-TT-AC | *** | ||||||
13463864-CGGGA-TGGGG | 11308188-CGGGA-TGGGG | *** | ||||||
13464430-GG-AT | 11308754-GG-AT | *** | ||||||
13470314-AG-CA | 11314638-AG-CA | *** | ||||||
13470744-GTACC-TAATG | 11315068-GTACC-TAATG | *** | ||||||
13483112-TAAA-AAAT | 11327436-TAAA-AAAT | *** | ||||||
13483571-CCCT-TCCTG | 11327895-CCCT-TCCTG | *** | ||||||
13483917-CGTGA-ACTGT | 11328241-CGTGA-ACTGT | *** | ||||||
13485375-ATAACA-GTATCG | 11329699-ATAACA-GTATCG | *** | ||||||
13489328-GCA-ACG | 11333652-GCA-ACG | *** | ||||||
13606877-C-CAAAAAAAAAA | 11451201-C-CAAAAAAAAAA | 25×A | *** | |||||
13620448-T-TAAAA | 11464772-T-TAAAA | 14×A | *** | |||||
13907831-T-TTTTTATTTTA | 11787125-T-TTTTTATTTTA | 12×TTTTA | *** | |||||
15171226-CTTTTTT-C | 13059312-CTTTTTT-C | 19×T | *** | |||||
15558495-TAGAT-CAGAC | 13446615-TAGAT-CAGAC | *** | ||||||
17062623-CAAAG-GAAAA | 14950743-CAAAG-GAAAA | *** | ||||||
18971202-CA-C | 16859322-CA-C | 11×A | *** | |||||
19025583-GAT-CACCAC | 16913703-GAT-CACCAC | *** | ||||||
19086493-TC-CA | 16974613-TC-CA | *** | ||||||
19309422-CATAT-C | 17197542-CATAT-C | 19×AT | *** | |||||
19604828-AC-A | 17492948-AC-A | P5_Prx | *** | |||||
19604834-AC-A | 17492954-AC-A | P5_Prx | *** | |||||
19937298-ACCCGCTCCA-CCCCCCCCCC | 17825418-ACCCGCTCCA-CCCCCCCCCC | P5_Prx | *** | |||||
20242459-CTG-C | 18080573-CTG-C | P5_Dst | *** | |||||
22251764-ATTTTTT-GTTTCTA | 20089878-ATTTTTT-GTTTCTA | DYZ19 | *** | |||||
22251873-ATCT-TTCA | 20089987-ATCT-TTCA | DYZ19 | *** | |||||
22252000-GTGATG-CAGATA | 20090114-GTGATG-CAGATA | DYZ19 | *** | |||||
22252035-CATGGT-C | 20090149-CATGGT-C | DYZ19 | *** | |||||
22293040-CAC-TAA | 20131154-CAC-TAA | DYZ19 | *** | |||||
22318642-GA-G | 20156756-GA-G | DYZ19 | *** | |||||
22360134-TTTT-GTC | 20198248-TTTT-GTC | DYZ19 | *** | |||||
22366697-TTT-AGG | 20204811-TTT-AGG | DYZ19 | *** | |||||
22419808-ATTAGT-CTTTAC | 20257922-ATTAGT-CTTTAC | DYZ19 | *** | |||||
22970282-C-CAA | 20808396-C-CAA | 27×A | *** | |||||
26416299-G-AAAA | 24270152-G-AAAA | P1_Y1 | 20×A | *** | ||||
26499952-ATTTTTT-GTGTGTA | 24353805-ATTTTTT-GTGTGTA | P1_Y1 | 20×T | *** | ||||
27398536-GC-AA | 25252389-GC-AA | P1_g3 | *** | |||||
28798977-GTGGATTGGAG-ATGGGAAGGAA | 26652830-GTGGATTGGAG-ATGGGAAGGAA | *** | ||||||
58870540-T-TC | 56720328-T-TG | *** | ||||||
58910242-C-CAACA | 56680628-G-GTGTT | *** | ||||||
58910254-A-ACTCTG | 56680616-A-ACAGAG | *** | ||||||
58917663-NNNNNNNN-N | *** | |||||||
58981999-TCCATTCCAATCCGTG-T | 56835852-TCCATTCCAATCCGTG-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.