Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > L1335/S530 > L1065 > FGC10125 > FGC10117 > FGC10122

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
107327
BigY2
107327
FGC
7DCXW
25980833-T-G 23834686-T-G A20671 P1_Y1 A*
8835720-T-C 8967679-T-C FGC10118 YY+++
5619940-C-T 5751899-C-T FGC10114 +
23997311-A-G 21851164-A-G FGC10128 Y+
3523616-A-T 3655575-A-T FGC10113 +
19117668-GT-G 17005788-GT-G 9×T++**
13652585-C-T 11496909-C-T FGC10120 +++
6752688-G-A 6884647-G-A FGC10115 YY+++
28533877-T-C 26387730-T-C FGC10130 Y**+
18083719-G-T 15971839-G-T FGC10126 YY+++
15672278-T-C 13560398-T-C FGC10123 Y+
22868276-T-TA 20706390-T-TA FGC10131 ***
10067614-G-A 10230005-G-A FGC10119 *
10914793-G-T **
10913717-C-T **
10896185-C-G **
10916703-G-T **
10931293-C-A **
10975847-A-ATTACT **
10965158-C-A **
10969410-A-C **
10979840-C-A **
10980002-C-T **
11000338-G-C **
11001136-C-A **
11015176-A-T **
11018083-G-C **
11020608-G-T **
11026234-C-A **
13233426-C-A 11077750-C-A **
13239665-C-A 11083989-C-A **
13282089-C-A 11126413-C-A **
10896167-A-G **
56858769-T-G **
10895851-C-T **
10840874-C-G **
10803667-G-A **
10803670-T-A **
10803682-T-G **
10803691-C-T **
10807130-C-A **
10807193-C-A **
10816180-T-C **
10826895-A-C **
10826911-C-T **
10826915-G-A **
10826929-A-T **
10839547-C-A **
10840575-T-G **
10841933-C-T **
13319256-T-A 11163580-T-A **
10850459-C-A **
10851317-C-T **
10862384-C-A **
10862454-C-A **
10864067-C-A **
10865046-C-A **
10866238-C-CTTTCCA **
10872871-G-T **
10884486-G-C **
10884574-C-A **
10886775-G-A **
10887948-A-C **
10895823-T-A **
13308567-C-A 11152891-C-A **
13480845-G-C 11325169-G-C **
13347691-G-A 11192015-G-A **
14427250-T-C 12306525-T-C **
14135979-C-A 12015273-C-A **
14195284-T-C 12074578-T-C **
14195903-C-A 12075197-C-A **
14218754-C-A 12098048-C-A **
14219578-C-A 12098872-C-A **
14273446-C-T 12152740-C-T **
14308113-C-G 12187407-C-G **
14344355-G-T 12223650-G-T **
14376273-T-A 12255569-T-A **
14384508-T-C 12263804-T-C **
14423810-T-G 12303085-T-G **
14445149-C-A 12324422-C-A **
14135679-A-G 12014973-A-G **
14445359-C-A 12324632-C-A **
14457535-C-A 12336808-C-A **
14472892-C-A 12352161-C-A **
14472954-A-T 12352223-A-T **
14512161-G-C 12400366-G-C **
14518807-C-A 12407008-C-A **
14531401-C-A 12419602-C-A **
14531405-C-A 12419606-C-A **
14537743-C-A 12425944-C-A **
14546626-C-A 12434827-C-A **
14554465-A-C 12442666-A-C **
14135716-C-A 12015010-C-A **
14135672-T-C 12014966-T-C **
13472205-G-T 11316529-G-T **
11669588-T-A **
13480835-T-A 11325159-T-A **
13480841-T-C 11325165-T-C **
10797591-C-G **
13480846-G-A 11325170-G-A **
13543971-C-A 11388295-C-A **
13554673-T-C 11398997-T-C **
13585501-G-T 11429825-G-T **
13612849-C-A 11457173-C-A **
13643449-A-C 11487773-A-C **
11650022-G-T **
11663298-A-G **
11672016-G-T **
14135671-A-G 12014965-A-G **
13871996-A-G 11751290-A-G **
13893318-G-T 11772612-G-T **
13908568-C-T 11787862-C-T **
13940618-C-A 11819912-C-A **
14076765-C-G 11956059-C-G **
14086112-T-C 11965406-T-C **
14088964-C-A 11968258-C-A **
14135622-G-C 12014916-G-C **
14135626-A-C 12014920-A-C **
14135628-T-G 12014922-T-G **
14135643-G-T 12014937-G-T **
14135668-A-G 12014962-A-G **
10801973-T-G **
10682863-G-C **
10795594-C-A **
7094364-C-A 7226323-C-A **
6711885-C-T 6843844-C-T **
6711886-A-G 6843845-A-G **
6807245-A-T 6939204-A-T **
6807252-G-A 6939211-G-A **
6901306-C-A 7033265-C-A **
6922643-C-A 7054602-C-A **
6929568-C-G 7061527-C-G **
7022250-C-T 7154209-C-T **
7039580-C-A 7171539-C-A **
7040451-C-A 7172410-C-A **
7091094-C-G 7223053-C-G **
7094813-T-G 7226772-T-G **
6711866-AT-A 6843825-AT-A **
7094875-A-G 7226834-A-G **
7094884-C-G 7226843-C-G **
7094895-C-T 7226854-C-T **
7105045-T-A 7237004-T-A **
7148347-C-A 7280306-C-A **
7239433-T-G 7371392-T-G **
7253878-C-A 7385837-C-A **
7255266-C-G 7387225-C-G **
7309651-C-A 7441610-C-A **
7341143-T-C 7473102-T-C **
7362523-T-C 7494482-T-C **
6711879-A-G 6843838-A-G **
6711857-T-G 6843816-T-G **
7362541-C-A 7494500-C-A **
5990152-TC-T 6122111-TC-T **
5109752-T-G 5241711-T-G **
5185183-C-A 5317142-C-A **
5243667-C-A 5375626-C-A **
5359982-G-T 5491941-G-T **
5454772-C-A 5586731-C-A **
5562324-T-C 5694283-T-C **
5743438-C-A 5875397-C-A **
5817658-C-A 5949617-C-A **
5859307-C-T 5991266-C-T **
5906032-A-C 6037991-A-C **
5981161-T-C 6113120-T-C **
5990158-C-A 6122117-C-A **
6711850-T-G 6843809-T-G **
5990168-CA-C 6122127-CA-C **
5990172-A-G 6122131-A-G **
5990178-CT-C 6122137-CT-C **
5990182-T-TC 6122141-T-TC **
6001647-A-G 6133606-A-G **
6074686-ATATGTG-A 6206645-ATATGTG-A **
6089239-G-T 6221198-G-T **
6089741-G-A 6221700-G-A **
6458382-C-A 6590341-C-A **
6514436-C-A 6646395-C-A **
6579952-C-A 6711911-C-A **
6582283-C-A 6714242-C-A **
7362527-C-T 7494486-C-T **
7362557-T-C 7494516-T-C **
10777231-G-T **
10055214-G-C 10217605-G-C **
9945068-C-G 10107459-C-G **
10018428-T-C 10180819-T-C **
10018434-T-C 10180825-T-C **
10055158-C-T 10217549-C-T **
10055163-C-T 10217554-C-T **
10055164-A-G 10217555-A-G **
10055165-G-T 10217556-G-T **
10055174-C-T 10217565-C-T **
10055178-C-G 10217569-C-G **
10055196-G-T 10217587-G-T **
10055197-G-T 10217588-G-T **
10055218-A-C 10217609-A-C **
9768039-C-A 9930430-C-A **
10079519-T-C 10241910-T-C **
10658184-T-C **
10659939-C-A **
10666681-C-A **
10671190-C-A **
10677109-CACAAA-C **
10677122-A-ATTTAT **
10678486-G-T **
14554649-C-A 12442850-C-A **
10692593-A-C **
10745855-C-A **
10751091-C-T **
9944665-A-G 10107056-A-G **
9768009-C-T 9930400-C-T **
7362562-G-A 7494521-G-A **
8166663-A-G 8298622-A-G **
7536434-C-A 7668393-C-A **
7621859-T-C 7753818-T-C **
7643254-C-A 7775213-C-A **
7861541-C-A 7993500-C-A **
7861603-C-A 7993562-C-A **
7861608-C-A 7993567-C-A **
7861680-C-A 7993639-C-A **
7861723-C-A 7993682-C-A **
7985862-G-C 8117821-G-C **
8072506-C-A 8204465-C-A **
8080496-T-G 8212455-T-G **
8369857-C-A 8501816-C-A **
9767978-C-T 9930369-C-T **
8525336-C-T 8657295-C-T **
8735357-T-C 8867316-T-C **
8807189-C-A 8939148-C-A **
9123256-G-T **
9025249-C-T 9187640-C-T **
9076926-A-G 9239317-A-G **
9079525-A-C 9241916-A-C **
9140112-G-T 9302503-G-T **
9438159-T-G 9600550-T-G **
9451424-C-A 9613815-C-A **
9562081-T-TTCTGTCCC 9724472-T-TTCTGTCCC IR3_Prx **
9564510-TG-T 9726901-TG-T IR3_Prx **
14554599-C-A 12442800-C-A **
14698413-T-C 12586479-T-C **
14557530-A-G 12445731-A-G **
21586246-C-T 19424360-C-T **
20872367-A-G 18710481-A-G P4_Dst **
20872411-A-G 18710525-A-G P4_Dst **
20888580-A-T 18726694-A-T P4_Dst **
21187470-G-C 19025584-G-C **
21224989-C-A 19063103-C-A **
21268968-G-T 19107082-G-T **
21328699-A-G 19166813-A-G **
21337340-C-A 19175454-C-A **
21386432-C-A 19224546-C-A **
21488894-C-A 19327008-C-A **
21544624-A-G 19382738-A-G **
21597133-G-C 19435247-G-C **
20825426-C-A 18663540-C-A P4_Gap **
21602612-G-T 19440726-G-T **
21802874-C-A 19640988-C-A **
21997371-T-C 19835485-T-C **
21997473-T-C 19835587-T-C **
22013365-C-G 19851479-C-G **
22150139-A-C 19988253-A-C **
22171323-A-G 20009437-A-G **
22297791-T-A 20135905-T-A DYZ19 **
22435413-T-A 20273527-T-A DYZ19 **
22590796-T-C 20428910-T-C **
22590810-T-A 20428924-T-A **
20872331-A-C 18710445-A-C P4_Dst **
20815435-A-G 18653549-A-G P4_Gap **
22811084-T-C 20649198-T-C **
19377122-G-A 17265242-G-A **
19035834-G-A 16923954-G-A **
19055542-C-A 16943662-C-A **
19079275-C-A 16967395-C-A **
19112456-C-A 17000576-C-A **
19122036-C-A 17010156-C-A **
19246871-C-A 17134991-C-A **
19293568-T-G 17181688-T-G **
19293574-C-A 17181694-C-A **
19299509-T-G 17187629-T-G **
19300275-G-T 17188395-G-T **
19356505-T-G 17244625-T-G **
19479306-C-A 17367426-C-A **
20582535-TA-T 18420649-TA-T P5_Dst **
19479317-T-G 17367437-T-G **
19682363-G-GAA 17570483-G-GAA P5_Prx **
19686838-G-A 17574958-G-A P5_Prx **
19745493-T-A 17633613-T-A P5_Prx **
19871477-T-A 17759597-T-A P5_Prx **
20318510-A-T 18156624-A-T P5_Dst **
20318511-A-G 18156625-A-G P5_Dst **
20318525-G-A 18156639-G-A P5_Dst **
20318526-A-G 18156640-A-G P5_Dst **
20485071-T-TC 18323185-T-TC P5_Dst **
20535156-G-A 18373270-G-A P5_Dst **
22691941-C-A 20530055-C-A **
22851958-G-T 20690072-G-T **
19029953-G-A 16918073-G-A **
28683340-G-A 26537193-G-A **
28492955-G-T 26346808-G-T **
28533370-C-A 26387223-C-A **
28544049-T-A 26397902-T-A **
28551169-C-A 26405022-C-A **
28586698-C-A 26440551-C-A **
28586758-C-T 26440611-C-T **
28592026-G-A 26445879-G-A **
28594241-C-A 26448094-C-A **
28614028-C-A 26467881-C-A **
28621994-A-T 26475847-A-T **
28661923-C-A 26515776-C-A **
28683343-G-C 26537196-G-C **
28480951-C-A 26334804-C-A **
28683348-G-A 26537201-G-A **
28698779-A-G 26552632-A-G **
28720791-T-C 26574644-T-C **
28727733-C-A 26581586-C-A **
28732032-C-A 26585885-C-A **
28732053-G-A 26585906-G-A **
28755018-C-A 26608871-C-A **
28771895-T-A 26625748-T-A **
28780271-T-C 26634124-T-C **
56823415-G-T **
56850720-A-C **
28484476-C-A 26338329-C-A **
27964994-G-T 25818847-G-T P1_Y2 **
22880571-G-T 20718685-G-T **
23291201-G-T 21129315-G-T **
22884444-T-A 20722558-T-A **
22884671-T-C 20722785-T-C **
22997681-T-G 20835795-T-G **
23038081-A-C 20876195-A-C **
23065137-G-T 20903251-G-T **
23066333-C-A 20904447-C-A **
23104479-C-A 20942593-C-A **
23105042-G-T 20943156-G-T **
23127758-C-A 20965872-C-A **
23205908-AG-A 21044022-AG-A **
23286542-A-G 21124656-A-G **
23516728-G-A 21354842-G-A FGC56878 **
27872803-C-A 25726656-C-A P1_Y2 **
23522256-G-T 21360370-G-T **
23773796-C-A 21611910-C-A **
23837614-G-T 21675728-G-T **
23848625-C-T 21686739-C-T **
24241205-CACA-C 22095058-CACA-C P3_b1 **
24297713-C-T 22151566-C-T P3_t1 **
24422478-C-CAAA 22276331-C-CAAA 43×A**
24458766-A-G 22312619-A-G **
25089811-A-C 22943664-A-C g1 **
25533459-A-G 23387312-A-G P1_gr1 **
25966259-T-A 23820112-T-A P1_Y1 **
27029650-G-A 24883503-G-A P1_r4 **
19030591-C-A 16918711-C-A **
19014502-CG-C 16902622-CG-C **
14661411-A-G 12549476-A-G **
16062831-C-A 13950951-C-A **
15735549-G-A 13623669-G-A **
15735569-C-T 13623689-C-T **
15735590-A-G 13623710-A-G **
15773659-C-A 13661779-C-A **
15777057-C-A 13665177-C-A **
15839523-T-C 13727643-T-C **
16000038-G-T 13888158-G-T **
16022440-G-C 13910560-G-C **
16029503-C-A 13917623-C-A **
16060424-G-A 13948544-G-A **
16060550-C-A 13948670-C-A **
16064353-T-C 13952473-T-C **
15730603-C-T 13618723-C-T **
16091008-T-G 13979128-T-G **
16214174-C-A 14102294-C-A **
16319284-G-A 14207404-G-A **
16319287-C-G 14207407-C-G **
16344592-T-C 14232712-T-C **
16412385-T-C 14300505-T-C **
16424651-C-T 14312771-C-T **
16464731-C-A 14352851-C-A **
16506070-T-C 14394190-T-C **
16625555-G-T 14513675-G-T **
16686618-C-T 14574738-C-T **
15730607-C-T 13618727-C-T **
15730601-C-T 13618721-C-T **
16701759-G-T 14589879-G-T **
14933607-T-C 12821672-T-C **
14683702-G-C 12571768-G-C **
14698400-G-A 12586466-G-A Y91983 **
14698405-G-A 12586471-G-A **
5107283-G-A 5239242-G-A **
14698415-T-C 12586481-T-C **
14698425-C-G 12586491-C-G **
14715452-C-G 12603519-C-G **
14758789-T-C 12646858-T-C **
14793803-A-G 12681874-A-G **
14815437-C-A 12703508-C-A **
14919322-A-G 12807387-A-G **
14964988-C-A 12853063-C-A **
15684486-C-A 13572606-C-A **
14986389-C-T 12874457-C-T **
15012319-A-T 12900407-A-T **
15113699-C-A 13001786-C-A **
15180077-A-G 13068163-A-G **
15286163-C-A 13174262-C-A **
15379375-T-C 13267495-T-C **
15380410-G-A 13268530-G-A **
15386451-G-A 13274571-G-A **
15411390-C-A 13299510-C-A **
15432566-C-A 13320686-C-A **
15432790-C-A 13320910-C-A **
15605675-T-G 13493795-T-G **
16700378-C-A 14588498-C-A **
16702802-T-G 14590922-T-G **
19014491-C-G 16902611-C-G **
18630755-A-G 16518875-A-G **
18035882-G-C 15924002-G-C **
18035894-T-A 15924014-T-A A12359 **
18035896-G-T 15924016-G-T **
18035902-G-C 15924022-G-C **
18086747-A-G 15974867-A-G **
18174690-A-G 16062810-A-G **
18261732-T-C 16149852-T-C **
18270387-C-A 16158507-C-A **
18577836-C-A 16465956-C-A **
18621881-C-A 16510001-C-A **
18630754-C-T 16518874-C-T **
18630761-T-C 16518881-T-C **
17826175-G-A 15714295-G-A **
18630764-A-G 16518884-A-G **
18630773-A-G 16518893-A-G **
18630782-T-C 16518902-T-C **
18630789-T-C 16518909-T-C **
18630794-A-G 16518914-A-G **
18630816-G-C 16518936-G-C **
18707117-T-C 16595237-T-C **
18707238-C-A 16595358-C-A **
18793772-A-C 16681892-A-C **
18930579-G-A 16818699-G-A **
18955819-GA-G 16843939-GA-G 9×A**
17997521-C-A 15885641-C-A P7_Gap **
17707310-G-A 15595430-G-A **
16704261-G-A 14592381-G-A **
17175735-G-T 15063855-G-T **
16719714-A-C 14607834-A-C **
16783434-A-C 14671554-A-C **
16860748-GCAAAAAAA-G 14748868-GCAAAAAAA-G **
16886640-C-A 14774760-C-A **
16975166-A-T 14863286-A-T **
17038937-A-T 14927057-A-T **
17039077-C-A 14927197-C-A **
17058672-G-T 14946792-G-T **
17087102-C-A 14975222-C-A **
17087121-C-T 14975241-C-T **
17095446-C-A 14983566-C-A **
17183380-A-C 15071500-A-C **
17707309-G-A 15595429-G-A **
17211436-C-A 15099556-C-A **
17276155-G-C 15164275-G-C **
17318402-G-T 15206522-G-T **
17346292-G-A 15234412-G-A **
17373565-C-A 15261685-C-A **
17426767-C-A 15314887-C-A **
17466629-A-G 15354749-A-G **
17519595-C-A 15407715-C-A **
17622436-C-A 15510556-C-A Y133755 FGC73604 **
17639163-G-T 15527283-G-T **
17644098-G-T 15532218-G-T **
17707301-C-T 15595421-C-T **
5109740-T-G 5241699-T-G **
5223302-C-CAA 5355261-C-CAA 16×A**
5048968-A-G 5180927-A-G **
13390036-C-T 11234360-C-T **
22356859-A-T 20194973-A-T DYZ19 **
3995319-G-T 4127278-G-T **
16437351-C-A 14325471-C-A **
8761550-C-A 8893509-C-A **
6491875-C-A 6623834-C-A **
10927212-C-A **
4080782-C-A 4212741-C-A **
13218767-A-T 11063091-A-T **
5911957-C-A 6043916-C-A **
13218756-C-G 11063080-C-G **
13218752-A-G 11063076-A-G **
13218749-T-G 11063073-T-G **
3649186-C-A 3781145-C-A **
4138426-G-T 4270385-G-T **
11017343-C-A **
10994159-C-A **
6699096-T-A 6831055-T-A **
17466584-C-A 15354704-C-A **
28631654-C-A 26485507-C-A **
15044433-C-A 12932523-C-A **
17707313-C-G 15595433-C-G Y99992 **
16052900-C-A 13941020-C-A **
6089764-G-GTTTTT 6221723-G-GTTTTT 31×T**
28492974-G-C 26346827-G-C **
10755508-C-A **
14786537-C-A 12674607-C-A **
11659688-T-A **
18956162-C-A 16844282-C-A **
19786557-A-AT 17674677-A-AT P5_Prx **
8326189-C-A 8458148-C-A **
7135437-C-A 7267396-C-A **
10666684-C-A **
28601568-C-A 26455421-C-A **
10018413-G-A 10180804-G-A **
2718988-C-A 2850947-C-A **
2718966-G-C 2850925-G-C **
4888081-C-A 5020040-C-A **
16092655-A-C 13980775-A-C **
7238302-C-A 7370261-C-A **
19130772-G-TTT 17018892-G-TTT **
10055207-C-T 10217598-C-T **
2718971-G-A 2850930-G-A **
3259034-TC-T 3390993-TC-T **
22422872-C-GAG 20260986-C-GAG DYZ19 **
2718915-C-T 2850874-C-T BY22163BY22164 **
13611203-G-A 11455527-G-A **
6901104-C-A 7033063-C-A **
10055170-A-G 10217561-A-G **
7451214-C-A 7583173-C-A IR1_L **
17027450-G-C 14915570-G-C **
15245576-A-G 13133662-A-G CTS3890 **
5446428-C-A 5578387-C-A ****
27151303-A-ATTTT 25005156-A-ATTTT P1_g3 25×T**
13205595-AAT-A 11049919-AAT-A 9×AT**
5045070-T-C 5177029-T-C **
18143385-A-T 16031505-A-T **
4571079-A-AAAAG 4703038-A-AAAAG 6×AAAG**
22972624-A-G 20810738-A-G **
10895841-C-T **
17203354-A-C 15091474-A-C **
15921421-C-A 13809541-C-A **
21959139-C-A 19797253-C-A **
2718947-G-C 2850906-G-C **
11658580-A-G **
19686221-C-CTTT 17574341-C-CTTT P5_Prx 16×T**
10677154-C-A **
10677153-A-C **
13480842-G-A 11325166-G-A **
13442798-T-G 11287122-T-G **
14505339-CAA-C 12393544-CAA-C 12×A**
10817940-C-CACTCT **
14146956-GA-G 12026250-GA-G **
21134925-A-ATT 18973039-A-ATT 22×T**
10745116-A-T **
10745095-C-G **
10745067-A-C **
10745053-A-G **
10745046-C-T **
23808085-C-A 21646199-C-A **
9211556-T-C 9373947-T-C **
13253219-T-C 11097543-T-C **
22092891-C-A 19931005-C-A **
3726625-T-C 3858584-T-C **
4020099-G-T 4152058-G-T **
4016421-T-C 4148380-T-C **
3873708-A-G 4005667-A-G **
3854250-C-A 3986209-C-A **
3831067-C-A 3963026-C-A **
3818183-C-A 3950142-C-A **
3818118-C-A 3950077-C-A **
3726478-C-A 3858437-C-A **
4081890-A-G 4213849-A-G **
3725797-C-A 3857756-C-A **
3681463-G-T 3813422-G-T **
3614802-G-T 3746761-G-T **
3596147-T-C 3728106-T-C **
3535698-G-C 3667657-G-C **
3531782-G-A 3663741-G-A **
3431158-C-A 3563117-C-A **
4063808-C-A 4195767-C-A **
4093286-C-A 4225245-C-A **
3377166-C-A 3509125-C-A **
4630394-A-T 4762353-A-T **
4792447-G-T 4924406-G-T **
4921118-C-A 5053077-C-A **
28482978-T-C 26336831-T-C **
4781294-T-C 4913253-T-C **
4700976-A-G 4832935-A-G **
4700928-C-A 4832887-C-A **
4677878-C-A 4809837-C-A **
4630385-G-T 4762344-G-T **
4093972-A-C 4225931-A-C **
4326452-GT-G 4458411-GT-G **
4325160-T-G 4457119-T-G **
4325158-G-T 4457117-G-T **
4221071-A-C 4353030-A-C **
4221055-A-C 4353014-A-C **
4208146-A-T 4340105-A-T **
4172721-C-A 4304680-C-A **
4172688-C-A 4304647-C-A **
3381528-C-A 3513487-C-A **
4365864-C-A 4497823-C-A **
3334750-C-A 3466709-C-A **
22696411-T-A 20534525-T-A **
2676796-C-T 2808755-C-T **
2676776-T-C 2808735-T-C **
10783828-C-A **
6694334-C-A 6826293-C-A **
18040490-C-A 15928610-C-A Y101061 **
6671633-A-T 6803592-A-T **
5017570-G-T 5149529-G-T **
2718910-A-T 2850869-A-T **
14076825-C-A 11956119-C-A **
4078589-G-T 4210548-G-T **
15285840-C-A 13173939-C-A **
6934705-C-A 7066664-C-A **
13899320-C-A 11778614-C-A **
5226466-A-G 5358425-A-G **
8694170-C-A 8826129-C-A **
2697750-T-C 2829709-T-C **
4788415-A-G 4920374-A-G **
2718950-T-C 2850909-T-C **
2895503-T-C 3027462-T-C **
3105696-C-A 3237655-C-A **
2989189-T-C 3121148-T-C **
2718975-C-G 2850934-C-G **
3158643-G-A 3290602-G-A **
2900276-G-A 3032235-G-A **
3046512-A-T 3178471-A-T **
2899743-C-A 3031702-C-A **
3274105-C-A 3406064-C-A **
2855461-T-CC 2987420-T-CC **
2840067-C-A 2972026-C-A **
2803528-C-A 2935487-C-A **
3122522-T-G 3254481-T-G **
2718976-C-G 2850935-C-G **
3016702-C-A 3148661-C-A **
20533590-C-T 18371704-C-T P5_Dst ***
20533600-T-C 18371714-T-C P5_Dst ***
20533839-C-T 18371953-C-T P5_Dst ***
20533856-C-A 18371970-C-A P5_Dst ***
20787461-A-T 18625575-A-T P4_Prx ***
20787484-C-T 18625598-C-T P4_Prx ***
19231319-CTT-C,CTTT 17119439-CTT-C,CTTT 24×T***
19127858-CAAA-C,CAAAA 17015978-CAAA-C,CAAAA 17×A***
20787464-G-T 18625578-G-T P4_Prx ***
20787477-G-T 18625591-G-T P4_Prx ***
20787478-G-T 18625592-G-T P4_Prx ***
20426783-C-T 18264897-C-T P5_Dst ***
21292579-T-A 19130693-T-A 15×A***
22226585-G-C 20064699-G-C DYZ19 ***
20533555-T-A 18371669-T-A P5_Dst ***
19716716-A-T 17604836-A-T P5_Prx ***
20426719-G-T 18264833-G-T P5_Dst ***
19646355-C-A 17534475-C-A P5_Prx ***
18140114-C-T 16028234-C-T ***
22232192-G-T 20070306-G-T DYZ19 ***
18478890-C-T 16367010-C-T P6_Dst ***
19646225-T-C 17534345-T-C P5_Prx ***
19646250-C-T 17534370-C-T P5_Prx ***
19646276-T-G 17534396-T-G P5_Prx ***
19646325-G-T 17534445-G-T P5_Prx ***
19646370-T-G 17534490-T-G P5_Prx ***
20426712-G-T 18264826-G-T P5_Dst ***
24836796-G-A 22690649-G-A P3_b2 ***
19656572-C-T 17544692-C-T P5_Prx ***
22236522-G-A 20074636-G-A DYZ19 ***
19716753-A-T 17604873-A-T P5_Prx ***
19977276-G-T 17865396-G-T P5_Prx ***
20369452-G-T 18207566-G-T P5_Dst ***
20425548-G-A 18263662-G-A P5_Dst ***
22226589-T-A 20064703-T-A DYZ19 ***
22251627-T-C 20089741-T-C DYZ19 ***
22236703-C-G 20074817-C-G DYZ19 ***
22366459-G-A 20204573-G-A DYZ19 ***
22341232-G-T 20179346-G-T DYZ19 ***
22341985-T-C 20180099-T-C DYZ19 ***
22342017-G-T 20180131-G-T DYZ19 ***
22343914-T-A 20182028-T-A DYZ19 ***
22365657-A-T 20203771-A-T DYZ19 ***
22366453-G-T 20204567-G-T DYZ19 ***
22450059-G-T 20288173-G-T DYZ19 ***
18151775-T-C 16039895-T-C ***
16533561-C-T 14421681-C-T ***
22495777-A-G 20333891-A-G DYZ19 ***
22421693-T-A 20259807-T-A DYZ19 ***
22433219-G-T 20271333-G-T DYZ19 ***
17675571-G-A 15563691-G-A ***
22480972-C-A 20319086-C-A DYZ19 ***
22480960-C-A 20319074-C-A DYZ19 ***
22341206-T-G 20179320-T-G DYZ19 ***
22337480-C-A 20175594-C-A DYZ19 ***
22251557-A-T 20089671-A-T DYZ19 ***
22263842-T-C 20101956-T-C DYZ19 ***
22251567-T-C 20089681-T-C DYZ19 ***
22251569-T-C 20089683-T-C DYZ19 ***
22251571-G-C 20089685-G-C DYZ19 ***
18687704-C-CA,CAA 16575824-C-CA,CAA 14×A***
22251635-T-G 20089749-T-G DYZ19 ***
22251636-A-T 20089750-A-T DYZ19 ***
22251641-T-A 20089755-T-A DYZ19 ***
22292347-G-A 20130461-G-A DYZ19 ***
22337295-A-T 20175409-A-T DYZ19 ***
22309406-A-T 20147520-A-T DYZ19 ***
22309411-A-G 20147525-A-G DYZ19 ***
22309421-G-T 20147535-G-T DYZ19 ***
22456607-T-C 20294721-T-C DYZ19 ***
22324914-T-G 20163028-T-G DYZ19 ***
22325098-G-C 20163212-G-C DYZ19 ***
22337291-C-A 20175405-C-A DYZ19 ***
22324875-T-A 20162989-T-A DYZ19 ***
13114403-C-A 10603889-C-A ***
16152201-A-T 14040321-A-T P8_Dst ***
5704399-G-T 5836358-G-T PF1947 ***
3999839-A-G 4131798-A-G ***
4074420-G-T 4206379-G-T ***
4650489-A-G 4782448-A-G ***
4650495-A-G 4782454-A-G ***
5359664-G-T 5491623-G-T ***
5365074-T-C 5497033-T-C ***
5476609-G-A 5608568-G-A ***
6014914-T-A 6146873-T-A ***
22342023-T-G 20180137-T-G DYZ19 ***
6121384-G-T 6253343-G-T ***
6192690-A-T 6324649-A-T IR3_Dst ***
6565943-A-G 6697902-A-G ***
7027456-G-T 7159415-G-T ***
9190980-A-C 9353371-A-C ***
9215444-G-T 9377835-G-T ***
9542059-G-T 9704450-G-T IR3_Prx ***
28804503-C-G 26658356-C-G ***
13480073-T-G 11324397-T-G ***
9986943-A-G 10149334-A-G ***
13475702-C-T 11320026-C-T ***
26483733-T-C 24337586-T-C P1_Y1 ***
10029513-A-G 10191904-A-G ***
22342921-T-A 20181035-T-A DYZ19 ***
10029623-C-T 10192014-C-T ***
22266400-C-G 20104514-C-G DYZ19 ***
13290949-G-A 11135273-G-A ***
22232196-T-A 20070310-T-A DYZ19 ***
19937580-G-A 17825700-G-A P5_Prx ***
4063676-G-A 4195635-G-A ***
25661607-T-A 23515460-T-A P1_b3 ***
27367569-G-A 25221422-G-A P1_g3 ***
19937585-G-A 17825705-G-A P5_Prx ***
13319934-A-C 11164258-A-C ***
13222970-A-G 11067294-A-G ***
13290803-G-C 11135127-G-C ***
13480076-T-A 11324400-T-A ***
9930605-T-C 10092996-T-C ***
10021787-C-T 10184178-C-T ***
21156851-G-C 18994965-G-C ***
13734082-T-C 11578406-T-C ***
13485335-T-A 11329659-T-A ***
13485370-G-A 11329694-G-A ***
13531976-C-A 11376300-C-A ***
13547761-C-G 11392085-C-G ***
13724902-G-A 11569226-G-A ***
13724927-A-T 11569251-A-T ***
13728301-T-A 11572625-T-A ***
13734098-A-T 11578422-A-T ***
22188724-C-T 20026838-C-T ***
13734101-G-C 11578425-G-C ***
13734106-G-A 11578430-G-A ***
13734116-G-A 11578440-G-A ***
16136884-A-T 14025004-A-T P8_Dst ***
16136885-C-T 14025005-C-T P8_Dst ***
16152191-A-T 14040311-A-T P8_Dst ***
16152196-T-A 14040316-T-A P8_Dst ***
13484480-A-T 11328804-A-T ***
13484476-G-A 11328800-G-A ***
10025628-G-A 10188019-G-A ***
13319909-A-C 11164233-A-C ***
10029655-G-A 10192046-G-A ***
13107688-C-G 10597174-C-G ***
13114371-G-A 10603857-G-A ***
13114407-G-A 10603893-G-A ***
13114411-T-C 10603897-T-C ***
13250749-G-A 11095073-G-A ***
13319782-A-T 11164106-A-T ***
13333675-A-T 11177999-A-T ***
13481183-C-A 11325507-C-A ***
13378119-G-C 11222443-G-C ***
13378120-C-T 11222444-C-T ***
13467436-C-A 11311760-C-A ***
13467876-C-T 11312200-C-T ***
13467891-A-T 11312215-A-T ***
13470632-C-T 11314956-C-T ***
13475717-C-T 11320041-C-T ***
25661601-G-A 23515454-G-A P1_b3 ***
8119053-G-GTTTTTTTT 8251012-G-GTTTTTTTT 16×T***
25661609-T-A 23515462-T-A P1_b3 ***
22341991-GATATTCTTCCTTTTG-CAGTTTATTTCTTCTT 20180105-GATATTCTTCCTTTTG-CAGTTTATTTCTTCTT DYZ19 ***
22231844-AGCT-CGCG 20069958-AGCT-CGCG DYZ19 ***
22251635-TA-GT 20089749-TA-GT DYZ19 ***
22268227-TCCAGAG-CATAGAT 20106341-TCCAGAG-CATAGAT DYZ19 ***
22309406-ACTGTAGACA-TCTGCGGACC 20147520-ACTGTAGACA-TCTGCGGACC DYZ19 ***
22335732-TAG-GTT 20173846-TAG-GTT DYZ19 ***
22341240-TAGAGTTTGTTCC-CATTGTGTCCTCG 20179354-TAGAGTTTGTTCC-CATTGTGTCCTCG DYZ19 ***
22341971-AGA-TGG 20180085-AGA-TGG DYZ19 ***
22360334-CGAA-AGAC 20198448-CGAA-AGAC DYZ19 ***
19937284-G-GCCCCCCCCCCC 17825404-G-GCCCCCCCCCCC P5_Prx 13×C***
22481363-GTGTT-CTGTC 20319477-GTGTT-CTGTC DYZ19 ***
22504697-AC-A 20342811-AC-A DYZ19 ***
25289745-TG-CA 23143598-TG-CA P2_r1 ***
25289814-A-AG 23143667-A-AG P2_r1 ***
25289820-AATGACAGAAAGAAGT-GATTAGCTTC 23143673-AATGACAGAAAGAAGT-GATTAGCTTC P2_r1 ***
25289842-TT-GA 23143695-TT-GA P2_r1 ***
28491345-A-AAACCCCCCAAAAAAAAG 26345198-A-AAACCCCCCAAAAAAAAG ***
22113187-C-CAAAAA 19951301-C-CAAAAA 23×A***
19656585-TG-CT 17544705-TG-CT P5_Prx ***
28700731-C-CTA 26554584-C-CTA 17×TA***
15309738-GC-AA 13197842-GC-AA ***
13483494-GGC-CAA 11327818-GGC-CAA ***
13485817-AAA-CAG 11330141-AAA-CAG ***
13535700-TAC-T 11380024-TAC-T ***
13611988-G-GTTTTTTCTTT 11456312-G-GTTTTTTCTTT 19×T***
13703173-GTTGAATGAAGTGG-ATAGACTGGCGTGC 11547497-GTTGAATGAAGTGG-ATAGACTGGCGTGC ***
13803955-AC-GG 11683249-AC-GG ***
15296804-CCTTGTGCTTCT-C 13184903-CCTTGTGCTTCT-C ***
16136884-AC-TT 14025004-AC-TT P8_Dst ***
19656560-CTTCTTA-GTCATTG 17544680-CTTCTTA-GTCATTG P5_Prx ***
16242402-CTTTTTTT-C 14130522-CTTTTTTT-C 18×T***
18140123-GCAA-ATAG 16028243-GCAA-ATAG ***
19126435-C-CCAAAAAAAAAA 17014555-C-CCAAAAAAAAAA ***
19646217-AC-A 17534337-AC-A P5_Prx ***
19646223-ACTATG-TCCATC 17534343-ACTATG-TCCATC P5_Prx ***
19646265-A-AGC 17534385-A-AGC P5_Prx ***
19656534-TG-CA 17544654-TG-CA P5_Prx ***
28597843-CTTTT-C 26451696-CTTTT-C 15×T***
11643801-T-A,G ***
13467903-GAATT-AAATA 11312227-GAATT-AAATA ***
17118395-CTTT-C,CTT 15006515-CTTT-C,CTT 16×T***
59021840-C-G 56875693-C-G ***
10986404-C-T ***
10986403-C-A,G ***
13489339-C-A 11333663-C-A ***
10907449-A-T ***
10937392-T-C ***
14960420-G-T 12848495-G-T ***
10760654-G-T ***
19646276-T-GG 17534396-T-GG P5_Prx ***
10050226-G-T 10212617-G-T ***
22023406-T-A 19861520-T-A ***
18267103-T-C 16155223-T-C ***
10986371-T-A ***
2795531-C-A 2927490-C-A ***
6816546-GAA-G,GA 6948505-GAA-G,GA 22×A***
22232190-G-T 20070304-G-T DYZ19 ***
26261840-T-C 24115693-T-C P1_Y1 ***
58870750-CATTTC-G 56720116-GAAATG-C ***
13725161-C-A 11569485-C-A ***
5937238-CTCTC-ATA 6069197-CTCTC-ATA ***
28804551-CT-TC 26658404-CT-TC ***
58843709-CAAT-GGAG 56747159-ATTG-CTCC ***
58861963-TTCA-GTCC 56728905-TGAA-GGAC ***
58872300-AG-CC 56718570-CT-GG ***
58872973-T-TTGGAG 56717896-G-GACTCC ***
13489071-G-T 11333395-G-T ***
13489070-A-T 11333394-A-T ***
13606903-G-AA 11451227-G-AA ***
25289800-TTCAG-ATC 23143653-TTCAG-ATC P2_r1 ***
20252794-TAC-AAAAA 18090908-TAC-AAAAA P5_Dst ***
20569648-G-AA 18407762-G-AA P5_Dst ***
58872941-CATTCGTTC-GATTTAGTT 56717922-GAACGAATG-AACTAAATC ***
22268297-GTGACC-TTGAGT 20106411-GTGACC-TTGAGT DYZ19 ***
25289808-TGCCT-AGTA 23143661-TGCCT-AGTA P2_r1 ***
22341150-TTCT-CTCA 20179264-TTCT-CTCA DYZ19 ***
28804494-AAT-GAG 26658347-AAT-GAG ***
13480147-TCA-T 11324471-TCA-T ***
13386059-GAA-G 11230383-GAA-G 10×A***
25661614-T-A 23515467-T-A P1_b3 ***
58836466-C-T 56754405-G-A ***
58823351-C-A 56767520-G-T ***
58823363-C-A 56767508-G-T ***
58832612-C-A 56758259-G-T ***
58833811-T-G 56757060-A-C ***
58836442-G-A 56754429-C-T ***
58836447-T-A 56754424-A-T ***
58836457-C-T 56754414-G-A ***
58838409-G-A 56752462-C-T ***
28491358-C-T 26345211-C-T ***
58838765-T-C 56752106-A-G ***
58840716-T-C 56750155-A-G ***
58843859-A-C 56747012-T-G ***
58843864-C-T 56747007-G-A ***
58846750-G-A 56744121-C-T ***
58847905-G-C 56742966-C-G ***
58847908-C-T 56742963-G-A ***
28794963-C-T 26648816-C-T ***
28491351-C-T 26345204-C-T ***
58861978-C-T 56728893-G-A ***
26950984-A-G 24804837-A-G P1_r3 ***
25661629-T-A 23515482-T-A P1_b3 ***
25661630-T-A 23515483-T-A P1_b3 ***
25954347-G-T 23808200-G-T P1_Y1 ***
26306647-G-T 24160500-G-T P1_Y1 ***
26306649-T-A 24160502-T-A P1_Y1 ***
26306656-T-A 24160509-T-A P1_Y1 ***
26445755-C-T 24299608-C-T P1_Y1 ***
27335122-G-A 25188975-G-A P1_g3 ***
27808453-C-T 25662306-C-T P1_Y2 15×T***
27367638-T-A 25221491-T-A P1_g3 ***
27367655-A-T 25221508-A-T P1_g3 ***
16829339-C-A 14717459-C-A ***
27367676-A-T 25221529-A-T P1_g3 ***
27426496-C-A 25280349-C-A P1_g3 ***
27426505-C-T 25280358-C-T P1_g3 ***
27590549-C-A 25444402-C-A P1_Y2 ***
58858774-C-A 56732097-G-T ***
58868571-C-T 56722300-G-A ***
14537860-C-A 12426061-C-A ***
4583023-CTG-TTT 4714982-CTG-TTT ***
58910843-G-C 56680028-C-G ***
59033934-G-A 56887787-G-A ***
13203978-CCTC-GTAT 11048302-CCTC-GTAT ***
14806136-T-C 12694207-T-C ***
10029583-TG-CA 10191974-TG-CA ***
21082306-AAG-A 18920420-AAG-A ***
2812777-A-ATTTTTTT 2944736-A-ATTTTTTT 30×T***
4650500-TATATATATATATATATATATACACACACACACAC-T 4782459-TATATATATATATATATATATACACACACACACAC-T ***
58906478-C-A 56684393-G-T ***
5338087-A-ATTTTTT 5470046-A-ATTTTTT 16×T***
5492439-C-CTTT 5624398-C-CTTT 18×T***
6867680-G-GTTTT 6999639-G-GTTTT 18×T***
9962643-CCGG-TTGA 10125034-CCGG-TTGA ***
13302551-ACAG-CCAA 11146875-ACAG-CCAA ***
13326060-T-TCA 11170384-T-TCA 14×A***
13378119-GC-CT 11222443-GC-CT ***
14960406-T-C 12848481-T-C ***
58893226-A-T 56697645-T-A ***
15742041-T-A 13630161-T-A ***
58872938-C-T 56717933-G-A ***
58868573-A-C 56722298-T-G ***
58868581-T-A 56722290-A-T ***
58870737-A-T 56720134-T-A ***
58870766-T-A 56720105-A-T ***
58872247-T-A 56718624-A-T ***
58872375-C-T 56718496-G-A ***
58872400-C-G 56718471-G-C ***
58872941-C-G 56717930-G-C ***
58877082-T-C 56713789-A-G ***
58872945-C-T 56717926-G-A ***
58872946-G-A 56717925-C-T ***
58872947-T-G 56717924-A-C ***
58872949-C-T 56717922-G-A ***
58872986-C-G 56717885-G-C ***
58876384-A-T 56714487-T-A ***
58876856-A-G 56714015-T-C ***
58877063-G-T 56713808-C-A ***
8702810-G-GT,T 8834769-G-GT,T 21×T***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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