Tree Position

R-P312/S116 > Z40481 > ZZ11 > U152/S28 > L2/S139 > Z258 > Z367/S255 > L20/S144 > Z46420 > S3856 > BY3584

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
335390
BigY2
335390
6187928-G-A 6319887-G-A IR3_Dst ***A*
20801142-G-A 18639256-G-A P4_Prx ***A*
26011504-T-C 23865357-T-C P1_Y1 ***A*
13687880-A-G 11532204-A-G DYZ17 A*
19645682-C-T 17533802-C-T P5_Prx 14×TA*
28816704-C-A 26670557-C-A A*
28817081-A-G 26670934-A-G A*
25307778-G-C 23161631-G-C P2_r1 +
23452327-G-A 21290441-G-A Y111570 YY++
23882348-T-G 21720462-T-G Z24565 Y+
7130240-T-G 7262199-T-G BY63446 YY++
7805106-G-A 7937065-G-A Y85018 YY++
7943118-T-C 8075077-T-C Y85429 YY++
8168068-G-GT 8300027-G-GT +*
8295178-G-A 8427137-G-A Y86388 YY++
8463823-G-A 8595782-G-A Y86949 YY++
8765343-T-C 8897302-T-C Y87940 YY++
16821238-A-T 14709358-A-T Y97410 YY++
17120312-G-A 15008432-G-A Y98246 YY++
18661273-G-C 16549393-G-C Y102349 YY++
22229030-C-T 20067144-C-T BY213318 DYZ19 ***+
22264307-G-T 20102421-G-T BY214801 DYZ19 ***+
22478956-C-G 20317070-C-G BY224131 DYZ19 ++
23749051-T-C 21587165-T-C Y112214 Y++
23842738-T-G 21680852-T-G BY148263 Y++
23391113-A-AT 21229227-A-AT 9×T++
22278055-A-T 20116169-A-T DYZ19 ****
7867902-A-AAGAG 7999861-A-AAGAG *
13470588-C-T 11314912-C-T *
13719203-C-T 11563527-C-T DYZ17 *
15092687-G-T 12980776-G-T ****
13454752-C-A 11299076-C-A **
28755774-C-A 26609627-C-A ****
13478342-T-A 11322666-T-A **
13489569-G-A 11333893-G-A **
9877903-T-G 10040294-T-G A12120 **
3705199-C-A 3837158-C-A **
10018339-A-C 10180730-A-C **
4900600-G-A 5032559-G-A V172 **
23464900-G-T 21303014-G-T M10369 PF1264 ****
21363112-G-A 19201226-G-A **
15012314-G-T 12900402-G-T **
13476136-C-A 11320460-C-A **
58977783-C-A 56831636-C-A **
21491135-G-T 19329249-G-T **
10987828-CCA-C **
10808617-A-G **
16320416-TA-T 14208536-TA-T 9×A**
25995096-A-AAT 23848949-A-AAT P1_Y1 9×AT**
10691407-C-T **
10691409-T-A **
10691421-C-CA **
14931889-C-A 12819954-C-A **
19720740-A-G 17608860-A-G P5_Prx **
17310939-GTT-G 15199059-GTT-G 13×T**
23010003-G-T 20848117-G-T **
8295594-G-GA 8427553-G-GA 10×A**
10987808-C-CGGGTT **
10888000-TCCATC-T **
13935662-C-A 11814956-C-A **
10808618-TTCCAC-T **
6948195-C-A 7080154-C-A **
19331331-C-A 17219451-C-A **
26202192-A-AG 24056045-A-AG P1_Y1 **
10751466-C-T **
10751471-T-TTGCAC **
19535598-C-A 17423718-C-A **
23825092-G-A 21663206-G-A **
18565030-C-A 16453150-C-A **
18723066-C-A 16611186-C-A **
2685665-G-GTT 2817624-G-GTT **
2708031-C-A 2839990-C-A **
2738781-G-T 2870740-G-T **
2783658-G-A 2915617-G-A **
2790247-C-A 2922206-C-A **
2845689-C-A 2977648-C-A **
2877966-C-A 3009925-C-A **
2895057-C-A 3027016-C-A **
2901531-C-A 3033490-C-A **
2907127-G-T 3039086-G-T **
2921282-T-G 3053241-T-G **
2948934-C-A 3080893-C-A **
2986470-C-A 3118429-C-A **
2986545-T-G 3118504-T-G **
3001309-C-A 3133268-C-A **
3001391-G-T 3133350-G-T **
3051406-G-T 3183365-G-T **
3078311-G-C 3210270-G-C **
3173224-C-A 3305183-C-A **
3173238-C-A 3305197-C-A **
3173244-C-A 3305203-C-A FT80334 **
3176940-C-A 3308899-C-A **
3223531-C-A 3355490-C-A **
3267443-C-A 3399402-C-A **
3271286-C-A 3403245-C-A **
3281998-C-A 3413957-C-A **
3325253-C-T 3457212-C-T **
3333091-G-T 3465050-G-T **
3333120-G-T 3465079-G-T **
3333132-T-G 3465091-T-G **
3343110-T-G 3475069-T-G **
3397271-G-T 3529230-G-T **
3405415-T-G 3537374-T-G **
3445127-G-A 3577086-G-A **
3489328-C-A 3621287-C-A **
3514773-G-T 3646732-G-T **
3605920-C-A 3737879-C-A **
3606015-G-T 3737974-G-T **
3606370-C-A 3738329-C-A **
3626903-C-A 3758862-C-A **
3652327-G-T 3784286-G-T **
3688319-C-A 3820278-C-A **
3726397-T-G 3858356-T-G **
3726398-A-T 3858357-A-T **
3820942-T-G 3952901-T-G **
3890249-T-C 4022208-T-C **
3991839-G-T 4123798-G-T **
3994637-C-A 4126596-C-A **
4042501-G-T 4174460-G-T **
4066005-C-A 4197964-C-A **
4088490-C-T 4220449-C-T **
4093289-C-G 4225248-C-G **
4093298-T-G 4225257-T-G **
4094738-C-G 4226697-C-G **
4107853-A-G 4239812-A-G **
4138908-G-T 4270867-G-T **
4172346-C-A 4304305-C-A **
4174941-A-C 4306900-A-C **
4178540-C-A 4310499-C-A **
4229081-T-C 4361040-T-C **
4236340-G-T 4368299-G-T **
4241528-A-G 4373487-A-G **
4271753-T-G 4403712-T-G **
4287153-G-A 4419112-G-A **
4302048-G-T 4434007-G-T FGC76700 **
4302241-C-T 4434200-C-T **
4302263-A-C 4434222-A-C **
4308562-C-A 4440521-C-A **
4316214-A-C 4448173-A-C **
4316227-G-T 4448186-G-T **
4319610-C-A 4451569-C-A **
4351256-T-G 4483215-T-G **
4357511-C-A 4489470-C-A **
4373445-G-T 4505404-G-T **
4412418-C-A 4544377-C-A **
4447008-C-A 4578967-C-A **
4460750-T-C 4592709-T-C **
4472331-T-G 4604290-T-G **
4473053-A-G 4605012-A-G **
4522124-A-C 4654083-A-C **
4522191-A-C 4654150-A-C **
4533395-C-A 4665354-C-A **
4540057-C-A 4672016-C-A **
4552689-G-T 4684648-G-T **
4554603-T-C 4686562-T-C **
4604980-T-C 4736939-T-C **
4606086-G-A 4738045-G-A **
4606196-G-T 4738155-G-T **
4616516-T-A 4748475-T-A **
4650354-C-G 4782313-C-G **
4665919-C-G 4797878-C-G **
4665943-C-A 4797902-C-A **
4687491-C-A 4819450-C-A **
4748924-AT-A 4880883-AT-A 9×T**
4757181-T-C 4889140-T-C **
4769151-T-G 4901110-T-G **
4781131-T-A 4913090-T-A **
4788437-C-A 4920396-C-A **
4825263-C-A 4957222-C-A **
4861781-C-A 4993740-C-A **
4920339-G-T 5052298-G-T **
4921017-C-A 5052976-C-A **
4925381-G-A 5057340-G-A **
4944475-C-A 5076434-C-A **
4959414-C-A 5091373-C-A **
4995367-T-G 5127326-T-G **
5084063-T-A 5216022-T-A **
5127776-A-C 5259735-A-C **
5199721-G-C 5331680-G-C **
5201147-G-T 5333106-G-T **
5204504-G-T 5336463-G-T **
5225178-C-A 5357137-C-A **
5226951-G-T 5358910-G-T **
5236274-C-A 5368233-C-A **
5246632-T-G 5378591-T-G **
5246674-G-T 5378633-G-T **
5246707-G-T 5378666-G-T **
5264453-T-A 5396412-T-A **
5335397-G-T 5467356-G-T **
5411997-G-C 5543956-G-C **
5416962-C-A 5548921-C-A **
5449947-T-G 5581906-T-G **
5459154-C-A 5591113-C-A FT206540 **
5482528-C-A 5614487-C-A **
5482530-G-C 5614489-G-C **
5494395-T-A 5626354-T-A **
5534498-C-A 5666457-C-A **
5534747-C-A 5666706-C-A **
5538091-G-T 5670050-G-T **
5538099-G-T 5670058-G-T **
5577349-C-A 5709308-C-A **
5627652-T-TA 5759611-T-TA 11×A**
5645064-C-T 5777023-C-T **
5665356-T-G 5797315-T-G **
5709859-G-T 5841818-G-T **
5720987-A-C 5852946-A-C **
5720988-A-C 5852947-A-C **
5728181-G-C 5860140-G-C **
5798794-T-C 5930753-T-C **
5858371-G-T 5990330-G-T **
5873315-G-T 6005274-G-T **
5873347-G-T 6005306-G-T **
5957075-CATAT-C 6089034-CATAT-C **
5967024-G-T 6098983-G-T **
5967570-C-A 6099529-C-A **
6043305-C-A 6175264-C-A **
6065102-C-A 6197061-C-A **
6065367-C-G 6197326-C-G **
6067136-G-C 6199095-G-C **
6090453-G-T 6222412-G-T **
6125978-T-A 6257937-T-A **
6155240-C-G 6287199-C-G IR3_Dst **
6170327-A-C 6302286-A-C IR3_Dst **
6170328-C-A 6302287-C-A IR3_Dst **
6312786-T-TC 6444745-T-TC IR3_Dst **
6367818-T-G 6499777-T-G **
6367821-T-G 6499780-T-G **
6388646-C-A 6520605-C-A **
6469150-G-T 6601109-G-T **
6469217-G-T 6601176-G-T **
6477517-G-T 6609476-G-T **
6488164-G-T 6620123-G-T **
6505248-G-T 6637207-G-T **
6540841-G-T 6672800-G-T **
6666343-G-T 6798302-G-T **
6709354-G-T 6841313-G-T **
6709523-C-A 6841482-C-A **
6747753-G-T 6879712-G-T **
6751981-C-A 6883940-C-A **
6756908-C-CA 6888867-C-CA 26×A**
6757804-G-T 6889763-G-T **
6775889-A-C 6907848-A-C **
6778593-T-G 6910552-T-G **
6827037-G-T 6958996-G-T **
6828450-A-G 6960409-A-G **
6833238-TC-T 6965197-TC-T **
6918307-C-T 7050266-C-T **
6920643-G-A 7052602-G-A Y82876 **
6922466-T-C 7054425-T-C **
6957673-T-G 7089632-T-G **
6978373-C-A 7110332-C-A **
7008764-T-G 7140723-T-G **
7011521-G-T 7143480-G-T **
7028519-C-A 7160478-C-A **
7099999-C-A 7231958-C-A **
7123591-G-C 7255550-G-C **
7134186-C-A 7266145-C-A **
7142692-G-T 7274651-G-T **
7155360-C-A 7287319-C-A **
7162276-C-A 7294235-C-A **
7165335-A-C 7297294-A-C **
7172494-G-T 7304453-G-T **
7188478-C-G 7320437-C-G **
7202031-C-A 7333990-C-A **
7202137-T-A 7334096-T-A **
7208191-G-A 7340150-G-A **
7214293-C-A 7346252-C-A **
7231415-G-T 7363374-G-T **
7243363-T-G 7375322-T-G **
7243375-G-T 7375334-G-T **
7243691-G-C 7375650-G-C **
7299600-C-A 7431559-C-A **
7353044-C-A 7485003-C-A **
7377621-C-A 7509580-C-A **
7384318-A-G 7516277-A-G **
7424339-C-A 7556298-C-A **
7424367-C-A 7556326-C-A **
7437407-C-A 7569366-C-A **
7448413-C-A 7580372-C-A IR1_L **
7541498-C-A 7673457-C-A **
7629853-C-T 7761812-C-T **
7632380-A-C 7764339-A-C **
7701808-C-A 7833767-C-A **
7701923-C-A 7833882-C-A **
7721299-G-T 7853258-G-T **
7782977-C-A 7914936-C-A **
7861502-C-A 7993461-C-A **
7866731-A-C 7998690-A-C **
7967145-G-A 8099104-G-A **
7969833-C-A 8101792-C-A **
7970403-C-A 8102362-C-A **
7970438-C-A 8102397-C-A **
8094864-T-G 8226823-T-G **
8140431-G-T 8272390-G-T FGC60130 FTA30383 **
8269943-A-C 8401902-A-C **
8344010-G-T 8475969-G-T **
8344054-G-T 8476013-G-T **
8371728-A-G 8503687-A-G **
8408432-C-A 8540391-C-A **
8481104-T-A 8613063-T-A **
8481114-A-T 8613073-A-T **
8481119-A-ATT 8613078-A-ATT **
8481134-T-A 8613093-T-A FT19811 **
8481141-T-A 8613100-T-A **
8690447-C-T 8822406-C-T **
8690462-G-A 8822421-G-A **
8690465-C-T 8822424-C-T **
8690473-C-A 8822432-C-A **
8690499-G-A 8822458-G-A Z35010 **
8690500-T-G 8822459-T-G **
8690501-C-G 8822460-C-G **
8692209-C-A 8824168-C-A **
8720602-T-G 8852561-T-G **
8843626-C-A 8975585-C-A **
8848207-GCACC-G 8980166-GCACC-G **
8907654-C-A 9039613-C-A **
8913860-A-C 9045819-A-C **
9056529-C-A **
9111347-A-C **
9119412-C-A **
9119449-C-G **
9030252-C-G 9192643-C-G **
9116723-G-T 9279114-G-T **
9117231-T-G 9279622-T-G **
9162884-A-G 9325275-A-G **
9171211-C-A 9333602-C-A **
9173099-C-A 9335490-C-A **
9173557-C-A 9335948-C-A **
9309902-A-C 9472293-A-C **
9309906-A-C 9472297-A-C **
9373008-TG-T 9535399-TG-T **
9373011-A-AC 9535402-A-AC **
9377965-C-A 9540356-C-A **
9427796-T-G 9590187-T-G **
9437408-G-T 9599799-G-T **
9482153-C-A 9644544-C-A **
9498986-A-C 9661377-A-C **
9603134-G-T 9765525-G-T IR3_Prx **
9603158-C-CGT 9765549-C-CGT IR3_Prx **
9852438-C-T 10014829-C-T **
9873687-C-A 10036078-C-A **
9873704-A-C 10036095-A-C **
9885304-G-T 10047695-G-T **
9941161-C-A 10103552-C-A **
9943058-G-T 10105449-G-T **
9956566-T-C 10118957-T-C **
10012929-C-T 10175320-C-T **
10016119-T-G 10178510-T-G **
10016555-C-A 10178946-C-A **
10031317-C-A 10193708-C-A **
10031842-G-T 10194233-G-T **
10031877-G-T 10194268-G-T **
10033404-C-A 10195795-C-A **
10045358-A-G 10207749-A-G **
10063071-C-A 10225462-C-A **
10625641-C-A **
10653015-C-A **
10659276-G-T **
10659277-C-A **
10659641-T-C **
10659644-A-T **
10659651-C-G **
10659657-T-A **
10659665-C-T **
10659674-C-A **
10659685-A-T **
10659689-C-T **
10659690-T-G **
10663066-C-A **
10666354-C-T **
10669081-C-A **
10669137-C-G **
10669151-C-A **
10683127-C-T **
10683128-C-T **
10691381-C-A **
10746906-TCA-T **
10746910-C-CTT **
10746944-A-T **
10751063-C-T **
10754864-G-T **
10754865-T-A **
10765634-G-A **
10768005-C-A **
10777404-C-T **
10786481-C-A **
10792453-A-T **
10794720-C-A **
10797421-G-T **
10808605-C-T **
10808608-T-G **
10809435-C-A **
10811511-C-A **
10811523-G-C **
10813501-C-A **
10818019-A-G **
10839996-C-A **
10858110-T-C **
10858710-C-A **
10892929-C-A **
10896066-C-A **
10902246-C-A **
10926536-C-A **
10926649-A-T **
10926655-T-C **
10926682-G-A **
10926684-A-T **
10926690-T-G **
10935613-A-C **
10949630-ATCCAT-A **
10953680-G-T **
10958345-A-G **
10965565-A-AATCCATTGCT **
10973784-C-A **
10976859-A-T **
10979752-C-A **
10987812-T-TA **
10987814-CA-C **
10987827-T-TTA **
11007220-C-A **
11009322-T-G **
11019410-A-T **
11022893-A-G **
11031288-C-A **
13194212-C-A 11038536-C-A **
13198725-A-C 11043049-A-C **
13209234-C-A 11053558-C-A **
13212529-C-A 11056853-C-A **
13212834-T-G 11057158-T-G **
13226288-C-A 11070612-C-A **
13230404-A-C 11074728-A-C **
13230412-A-C 11074736-A-C **
13254298-G-T 11098622-G-T **
13254357-G-T 11098681-G-T **
13254546-C-A 11098870-C-A **
13308226-C-A 11152550-C-A **
13313569-C-A 11157893-C-A **
13338596-C-A 11182920-C-A **
13448778-C-G 11293102-C-G **
13457762-A-G 11302086-A-G **
13457770-C-A 11302094-C-A **
13462180-C-A 11306504-C-A **
13469918-CT-C 11314242-CT-C **
13469937-C-G 11314261-C-G **
13469960-A-T 11314284-A-T **
13478199-G-T 11322523-G-T **
13480347-G-C 11324671-G-C **
13488626-T-G 11332950-T-G **
13489213-G-T 11333537-G-T **
13489455-C-A 11333779-C-A **
13491817-G-T 11336141-G-T **
13505134-C-T 11349458-C-T **
13512385-G-A 11356709-G-A **
13565098-C-A 11409422-C-A **
13565779-A-C 11410103-A-C **
13578388-C-A 11422712-C-A **
13578411-G-A 11422735-G-A **
13578600-C-A 11422924-C-A **
13603051-T-C 11447375-T-C **
13643680-T-C 11488004-T-C **
13698516-T-G 11542840-T-G DYZ17 **
13707087-T-A 11551411-T-A DYZ17 **
13707090-A-C 11551414-A-C DYZ17 **
13708986-A-T 11553310-A-T DYZ17 **
11644819-A-C DYZ17 **
11644822-C-A DYZ17 **
11645233-G-T DYZ17 **
11648547-T-G DYZ17 **
11649415-A-C DYZ17 **
11649585-A-C DYZ17 **
11656428-G-T DYZ17 **
11659219-C-G DYZ17 **
11659234-C-A DYZ17 **
11659840-C-A DYZ17 **
11676697-G-A DYZ17 **
13801491-A-C 11680785-A-C DYZ17 **
13809207-T-A 11688501-T-A DYZ17 **
13855097-G-T 11734391-G-T DYZ17 **
13856963-C-A 11736257-C-A DYZ17 **
13865935-G-T 11745229-G-T DYZ17 **
13881981-G-T 11761275-G-T **
13887564-C-A 11766858-C-A **
13898782-A-T 11778076-A-T **
13921639-C-A 11800933-C-A **
13932514-C-A 11811808-C-A **
13936251-A-AGAAG 11815545-A-AGAAG **
13937976-C-A 11817270-C-A **
13941477-C-A 11820771-C-A **
13978775-C-A 11858069-C-A **
13978831-CTCTGATTTTAGT-C 11858125-CTCTGATTTTAGT-C **
13996324-A-T 11875618-A-T **
14009463-C-A 11888757-C-A **
14032022-G-T 11911316-G-T FTA16129 **
14042699-A-AT 11921993-A-AT 9×T**
14191822-G-C 12071116-G-C **
14193081-G-T 12072375-G-T **
14228701-C-A 12107995-C-A **
14272907-A-G 12152201-A-G **
14281139-T-G 12160433-T-G **
14292704-A-C 12171998-A-C **
14293599-C-A 12172893-C-A **
14297239-G-T 12176533-G-T **
14339128-G-T 12218423-G-T **
14339338-A-G 12218633-A-G **
14352808-C-A 12232103-C-A **
14357735-C-A 12237030-C-A **
14367680-A-G 12246976-A-G **
14367794-C-A 12247090-C-A **
14387633-G-T 12266929-G-T **
14389900-C-A 12269196-C-A **
14421996-C-A 12301271-C-A **
14442951-A-T 12322224-A-T **
14458555-C-A 12337828-C-A **
14470524-G-T 12349793-G-T **
14473610-C-A 12352879-C-A **
14485221-G-T 12364490-G-T **
14505896-T-A 12394101-T-A **
14507653-C-A 12395858-C-A **
14509472-C-A 12397677-C-A **
14513104-C-A 12401309-C-A **
14530607-C-A 12418808-C-A **
14562813-C-A 12451013-C-A **
14607879-C-T 12496081-C-T **
14635746-G-T 12523815-G-T **
14778868-C-A 12666938-C-A **
14795048-T-G 12683119-T-G **
14802742-C-A 12690813-C-A **
14831851-T-G 12719918-T-G **
14858666-ATTTTTT-A 12746732-ATTTTTT-A 19×T**
14858709-C-A 12746775-C-A **
14911037-C-A 12799104-C-A **
14960225-C-G 12848300-C-G **
15070475-T-A 12958566-T-A **
15073183-C-A 12961273-C-A **
15180017-G-T 13068103-G-T **
15218575-A-G 13106661-A-G **
15221697-C-A 13109783-C-A **
15221725-A-C 13109811-A-C **
15229490-C-A 13117576-C-A **
15252759-C-A 13140845-C-A **
15365934-G-T 13254054-G-T **
15366004-G-T 13254124-G-T **
15420192-A-C 13308312-A-C **
15430288-G-T 13318408-G-T **
15495328-G-T 13383448-G-T **
15533217-A-C 13421337-A-C **
15542601-A-C 13430721-A-C **
15556758-C-A 13444878-C-A **
15575179-T-C 13463299-T-C **
15595143-C-A 13483263-C-A **
15608169-G-T 13496289-G-T **
15636103-C-T 13524223-C-T **
15647698-C-G 13535818-C-G **
15653749-A-C 13541869-A-C **
15677746-A-G 13565866-A-G **
15712284-C-A 13600404-C-A **
15770863-C-A 13658983-C-A **
15792976-C-T 13681096-C-T **
15797361-G-T 13685481-G-T **
15882586-C-T 13770706-C-T **
15919274-A-C 13807394-A-C **
15919275-G-A 13807395-G-A **
15930864-TCTCCTCTTC-T 13818984-TCTCCTCTTC-T **
15963975-C-A 13852095-C-A **
15985767-A-C 13873887-A-C **
16002909-G-T 13891029-G-T **
16033481-C-A 13921601-C-A **
16045634-T-G 13933754-T-G **
16054177-T-G 13942297-T-G **
16056052-G-T 13944172-G-T **
16095766-A-C 13983886-A-C **
16180930-A-C 14069050-A-C **
16181019-A-G 14069139-A-G **
16245012-G-C 14133132-G-C **
16270364-C-A 14158484-C-A **
16382657-G-T 14270777-G-T FT58057 **
16520896-G-T 14409016-G-T **
16574192-T-A 14462312-T-A **
16662631-A-C 14550751-A-C **
16675996-T-C 14564116-T-C **
16688322-C-G 14576442-C-G **
16689951-G-T 14578071-G-T **
16926817-C-A 14814937-C-A **
16929746-G-T 14817866-G-T **
16931497-G-T 14819617-G-T **
16941519-C-A 14829639-C-A **
16979974-G-C 14868094-G-C **
17056727-C-A 14944847-C-A **
17086847-C-A 14974967-C-A **
17089601-G-T 14977721-G-T **
17103792-C-A 14991912-C-A **
17104170-C-A 14992290-C-A **
17159697-C-A 15047817-C-A **
17230220-G-T 15118340-G-T **
17302185-G-T 15190305-G-T **
17306415-C-A 15194535-C-A **
17377984-G-T 15266104-G-T **
17426429-C-A 15314549-C-A **
17549457-G-C 15437577-G-C **
17552111-T-G 15440231-T-G **
17600650-C-A 15488770-C-A **
17624510-G-T 15512630-G-T **
17625208-C-A 15513328-C-A **
17722601-C-A 15610721-C-A **
17735380-G-T 15623500-G-T **
17782652-A-C 15670772-A-C **
17786999-G-A 15675119-G-A FT210157 **
17787745-A-G 15675865-A-G **
17821885-A-G 15710005-A-G **
17874282-C-A 15762402-C-A **
17885578-C-A 15773698-C-A **
17928760-A-C 15816880-A-C **
17991032-G-T 15879152-G-T P7_Prx **
17991036-G-T 15879156-G-T P7_Prx **
17991058-AATAT-A 15879178-AATAT-A P7_Prx 9×AT**
18121772-C-A 16009892-C-A **
18147551-G-A 16035671-G-A **
18159315-C-A 16047435-C-A FT217431 **
18177202-C-A 16065322-C-A **
18191820-A-C 16079940-A-C **
18191853-G-T 16079973-G-T **
18194405-A-G 16082525-A-G **
18211029-A-C 16099149-A-C **
18365481-G-A 16253601-G-A P6_Prx **
18554362-G-T 16442482-G-T **
18554368-G-T 16442488-G-T **
18554382-G-T 16442502-G-T **
18682571-A-T 16570691-A-T **
18707220-T-C 16595340-T-C **
18756838-C-A 16644958-C-A **
18853229-T-C 16741349-T-C **
18872931-C-A 16761051-C-A **
18879952-T-G 16768072-T-G **
18905120-T-G 16793240-T-G **
18911048-A-C 16799168-A-C **
18926872-CAAAAA-C 16814992-CAAAAA-C 17×A**
18953008-A-C 16841128-A-C **
18963939-C-A 16852059-C-A **
18972698-C-A 16860818-C-A **
18972711-C-A 16860831-C-A **
18976612-A-G 16864732-A-G **
18984018-C-T 16872138-C-T **
18988080-G-T 16876200-G-T **
19041208-G-T 16929328-G-T **
19042661-T-C 16930781-T-C **
19128640-C-A 17016760-C-A **
19155914-G-T 17044034-G-T **
19201423-C-A 17089543-C-A **
19206740-GTAAAAA-G 17094860-GTAAAAA-G **
19235309-T-A 17123429-T-A **
19250161-G-T 17138281-G-T **
19250164-G-T 17138284-G-T **
19271572-T-C 17159692-T-C **
19286296-C-A 17174416-C-A **
19293617-A-C 17181737-A-C **
19310999-T-G 17199119-T-G **
19311011-G-T 17199131-G-T **
19356506-G-T 17244626-G-T **
19373814-C-T 17261934-C-T **
19410169-G-T 17298289-G-T **
19415525-C-T 17303645-C-T **
19416720-G-T 17304840-G-T **
19461921-C-A 17350041-C-A **
19486916-G-T 17375036-G-T **
19522530-C-A 17410650-C-A **
19523423-AT-A 17411543-AT-A **
19539739-A-C 17427859-A-C **
19732419-G-GCA 17620539-G-GCA P5_Prx **
19827606-C-T 17715726-C-T P5_Prx **
19847667-AC-A 17735787-AC-A P5_Prx **
20019186-T-C 17907306-T-C P5_Prx **
20021399-G-C 17909519-G-C P5_Prx **
20249941-T-G 18088055-T-G P5_Dst **
20250036-T-TC 18088150-T-TC P5_Dst **
20294490-A-C 18132604-A-C P5_Dst **
20433763-C-CA 18271877-C-CA P5_Dst 8×A**
20470150-A-T 18308264-A-T P5_Dst **
20470183-C-A 18308297-C-A P5_Dst **
20570195-G-T 18408309-G-T P5_Dst **
20712215-G-T 18550329-G-T P4_Prx **
20741710-T-G 18579824-T-G P4_Prx **
20800744-T-C 18638858-T-C P4_Prx **
21068290-C-A 18906404-C-A **
21068291-A-T 18906405-A-T **
21068299-A-T 18906413-A-T **
21068314-C-T 18906428-C-T **
21072378-C-A 18910492-C-A **
21092208-TTG-T 18930322-TTG-T **
21125535-G-T 18963649-G-T **
21134913-C-A 18973027-C-A **
21187831-A-G 19025945-A-G **
21202638-G-T 19040752-G-T **
21211705-A-C 19049819-A-C **
21211721-A-C 19049835-A-C **
21211744-C-A 19049858-C-A **
21224930-G-T 19063044-G-T **
21224992-G-T 19063106-G-T **
21225048-G-T 19063162-G-T **
21241879-G-A 19079993-G-A **
21267935-C-A 19106049-C-A **
21325617-C-A 19163731-C-A FT72576 **
21349615-G-T 19187729-G-T **
21349625-G-T 19187739-G-T **
21363118-G-A 19201232-G-A **
21363124-G-A 19201238-G-A **
21367690-ATT-A 19205804-ATT-A 14×T**
21368694-G-T 19206808-G-T **
21409641-C-A 19247755-C-A **
21455887-C-A 19294001-C-A **
21482846-T-C 19320960-T-C **
21488712-C-A 19326826-C-A **
21488719-A-C 19326833-A-C **
21497320-C-A 19335434-C-A **
21544511-C-A 19382625-C-A FT80985 **
21544552-C-A 19382666-C-A **
21563020-C-A 19401134-C-A **
21578389-T-G 19416503-T-G **
21578563-G-GT 19416677-G-GT **
21578565-TC-T 19416679-TC-T **
21624685-C-A 19462799-C-A **
21624735-C-A 19462849-C-A **
21634348-C-T 19472462-C-T **
21635294-AT-A 19473408-AT-A **
21639066-C-T 19477180-C-T **
21681732-G-T 19519846-G-T **
21700595-GAAAAAA-G 19538709-GAAAAAA-G 17×A**
21771662-G-T 19609776-G-T **
21847510-G-T 19685624-G-T **
21954998-G-T 19793112-G-T **
21998650-T-C 19836764-T-C **
22056366-C-A 19894480-C-A **
22075713-C-A 19913827-C-A **
22101002-CAAAA-C 19939116-CAAAA-C 27×A**
22149955-C-G 19988069-C-G **
22171501-C-A 20009615-C-A **
22208907-C-A 20047021-C-A **
22214701-T-A 20052815-T-A **
22215274-G-A 20053388-G-A **
22253194-G-T 20091308-G-T DYZ19 **
22269227-G-T 20107341-G-T DYZ19 **
22322058-G-T 20160172-G-T DYZ19 **
22441968-T-G 20280082-T-G DYZ19 **
22520788-CAAAAAA-C 20358902-CAAAAAA-C 23×A**
22660786-C-A 20498900-C-A **
22774932-G-T 20613046-G-T **
22809974-G-T 20648088-G-T **
22810738-C-A 20648852-C-A **
22811316-G-A 20649430-G-A **
22855349-C-A 20693463-C-A **
22936405-G-C 20774519-G-C Y110173 **
22965275-G-A 20803389-G-A **
22981046-G-T 20819160-G-T **
22981091-G-A 20819205-G-A Y110285 **
22981118-G-T 20819232-G-T **
22995240-G-A 20833354-G-A **
23036884-G-T 20874998-G-T **
23053052-C-A 20891166-C-A **
23065554-G-T 20903668-G-T A12309 **
23097869-C-A 20935983-C-A **
23126661-G-A 20964775-G-A **
23142052-G-T 20980166-G-T **
23190060-A-C 21028174-A-C **
23198768-G-T 21036882-G-T **
23260719-C-A 21098833-C-A FT134961 **
23264070-C-A 21102184-C-A **
23264116-A-C 21102230-A-C **
23333896-G-T 21172010-G-T **
23464643-C-A 21302757-C-A **
23464952-G-T 21303066-G-T **
23464959-G-T 21303073-G-T **
23465001-G-T 21303115-G-T **
23569036-G-A 21407150-G-A **
23633397-T-C 21471511-T-C **
23742233-C-A 21580347-C-A **
23773875-G-T 21611989-G-T **
23801713-C-A 21639827-C-A **
23801988-C-A 21640102-C-A **
23837757-C-A 21675871-C-A **
23848140-G-A 21686254-G-A **
23875321-T-C 21713435-T-C **
23875742-G-T 21713856-G-T **
23875764-T-G 21713878-T-G **
23899380-A-G 21737494-A-G **
23899404-G-GGT 21737518-G-GGT **
24405315-G-A 22259168-G-A **
24513641-C-A 22367494-C-A **
24518534-C-A 22372387-C-A **
24583333-G-GT 22437186-G-GT P3_t2 **
24600702-C-T 22454555-C-T P3_t2 **
24611447-T-C 22465300-T-C P3_t2 **
24910803-G-T 22764656-G-T g1 **
25803006-A-G 23656859-A-G P1_b3 **
25939844-G-T 23793697-G-T P1_Y1 **
25995422-G-C 23849275-G-C P1_Y1 **
25995464-GTATATA-G 23849317-GTATATA-G P1_Y1 10×TA**
26010167-A-G 23864020-A-G P1_Y1 **
26133096-A-G 23986949-A-G P1_Y1 **
26314749-C-A 24168602-C-A P1_Y1 **
26326119-G-A 24179972-G-A P1_Y1 **
26427350-C-A 24281203-C-A P1_Y1 **
27216641-C-A 25070494-C-A P1_g3 **
27216692-C-A 25070545-C-A P1_g3 **
27507507-T-G 25361360-T-G P1_Y2 **
27543650-A-G 25397503-A-G P1_Y2 **
28114323-C-T 25968176-C-T P1_b4 **
28462144-C-A 26315997-C-A **
28472984-C-A 26326837-C-A **
28534479-A-G 26388332-A-G **
28536169-C-A 26390022-C-A **
28536198-A-C 26390051-A-C **
28546908-G-T 26400761-G-T **
28546924-G-T 26400777-G-T **
28558613-T-A 26412466-T-A **
28595943-C-A 26449796-C-A **
28642746-G-T 26496599-G-T **
28642766-A-G 26496619-A-G FTB38972 **
28642786-G-T 26496639-G-T **
28679665-A-C 26533518-A-C **
28679683-C-A 26533536-C-A **
28706279-T-A 26560132-T-A **
28727756-G-T 26581609-G-T **
28774663-T-C 26628516-T-C **
28797814-A-C 26651667-A-C **
28802620-A-G 26656473-A-G **
28802631-C-A 26656484-C-A **
56763551-G-T **
56828369-C-A **
56830912-G-C **
56834609-A-G **
56835340-C-A **
56836195-G-C **
56836220-G-T **
56841358-G-T **
56846269-T-G **
56846292-T-G **
56851689-C-G **
56851702-C-T **
56863194-C-A **
56879545-G-A **
22428652-C-A 20266766-C-A DYZ19 ***
58979586-T-A 56833439-T-A ***
58972299-C-G 56826152-C-G ***
13513147-C-CA 11357471-C-CA ***
22357653-A-T 20195767-A-T DYZ19 ***
9986769-A-C 10149160-A-C ***
19958121-G-GT 17846241-G-GT P5_Prx 9×T***
9094833-C-T 9257224-C-T ***
22510137-G-T 20348251-G-T BY34325 DYZ19 ***
13869184-G-A 11748478-G-A DYZ17 ***
13489790-G-A 11334114-G-A ***
9330742-T-G 9493133-T-G ***
13476477-G-A 11320801-G-A ***
22284249-G-A 20122363-G-A DYZ19 ***
22285412-A-G 20123526-A-G DYZ19 ***
24154321-C-A 22008174-C-A P3_b1 ***
24820238-GACT-G 22674091-GACT-G P3_b2 ***
25320989-G-A 23174842-G-A P2_r1 ***
26262951-T-TA 24116804-T-TA P1_Y1 ***
14272686-CTT-C,CT 12151980-CTT-C,CT 15×T***
18709290-C-CA 16597410-C-CA 10×A***
15206182-TAA-T,TA 13094268-TAA-T,TA 14×A***
14331131-CTTTTT-C 12210425-CTTTTT-C 25×T***
14656153-AC-A,AA 12544218-AC-A,AA ***
17589122-C-A 15477242-C-A ***
56829547-T-G ***
10036800-T-G 10199191-T-G ***
2970899-C-A 3102858-C-A ***
4630809-G-T 4762768-G-T ***
5073702-AATAT-A,AATATAT 5205661-AATAT-A,AATATAT 10×AT***
5586430-C-A 5718389-C-A ***
6114998-G-T 6246957-G-T ***
6444994-C-A 6576953-C-A ***
6803780-C-A 6935739-C-A ***
7111181-C-A 7243140-C-A ***
7111201-C-A 7243160-C-A FTA38046 ***
7338745-G-A 7470704-G-A ***
7867906-A-G 7999865-A-G ***
8675044-C-A 8807003-C-A ***
8849608-C-T 8981567-C-T ***
9377869-C-A 9540260-C-A ***
9462140-G-A 9624531-G-A ***
9875020-C-A 10037411-C-A ***
10009828-C-A 10172219-C-A ***
10647769-C-A ***
10776492-C-A ***
10776496-C-T ***
10776502-C-A ***
10776563-A-T ***
10999874-C-CCCTGCAGTCGCTTTG ***
11014371-C-G ***
11014466-C-T ***
11014473-A-G ***
13194157-C-A 11038481-C-A ***
13316005-C-A 11160329-C-A ***
13448838-C-G 11293162-C-G ***
13452164-A-T 11296488-A-T ***
13470491-C-T 11314815-C-T ***
13488579-C-T 11332903-C-T ***
13488618-G-A 11332942-G-A ***
13489525-C-T 11333849-C-T ***
13869190-G-T 11748484-G-T DYZ17 ***
14324798-C-A 12204092-C-A ***
14425880-A-G 12305155-A-G ***
14614338-C-A 12502536-C-A ***
14985013-C-A 12873081-C-A ***
15746819-C-A 13634939-C-A ***
15749575-CT-C,CTT 13637695-CT-C,CTT 15×T***
16623683-G-T 14511803-G-T ***
17387316-ATA-A,ATG 15275436-ATA-A,ATG ***
17648746-C-A 15536866-C-A ***
18059746-G-T 15947866-G-T ***
18108457-CTT-C,CT 15996577-CTT-C,CT 13×T***
19183842-TG-T,TT 17071962-TG-T,TT ***
19415787-AG-A 17303907-AG-A ***
19436770-GAA-G 17324890-GAA-G ***
21402279-T-C 19240393-T-C ***
21953535-CTTT-C,CTTTTT 19791649-CTTT-C,CTTTTT 15×T***
22125125-C-A 19963239-C-A ***
22422469-C-A 20260583-C-A DYZ19 ***
22422470-C-A 20260584-C-A DYZ19 ***
22880868-C-A 20718982-C-A ***
23200507-G-A 21038621-G-A ***
23501788-C-A 21339902-C-A ***
26563779-C-T 24417632-C-T P1_g2 ***
28547088-TAAA-T 26400941-TAAA-T 14×A***
28784388-A-T 26638241-A-T ***
56829781-C-A,T ***
56829810-C-G,T ***
56830540-TGCTGAATTCC-CATTGAATTCC,T ***
56836723-C-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.