Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > M222 > FGC4077 > A725 > ~25552691-A-G

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
GNSTN
7545547-A-T 7677506-A-T FGC42640 YY+
14782888-A-C 12670958-A-C FGC42645 YY+
14440203-C-T 12319476-C-T FGC42644 Y+
8670802-A-T 8802761-A-T FGC42642 YY+
8141284-A-C 8273243-A-C FGC42641 YY+
8767819-T-C 8899778-T-C FGC42643 YY+
4657816-C-T 4789775-C-T FGC42639 +
8982048-T-C 9144439-T-C ZS4529 Y+
21861667-G-A 19699781-G-A FGC42655 YY+
15449333-T-C 13337453-T-C FGC42647 YY+
15982649-A-G 13870769-A-G FGC42648 YY+
5696230-C-T 5828189-C-T F9417 FGC42637 +
19162422-A-G 17050542-A-G FGC42650 YY+
3895898-G-T 4027857-G-T FGC42638 +
28607093-A-T 26460946-A-T FGC42657 +
19347563-C-T 17235683-C-T FGC42651 YY+
19356242-C-A 17244362-C-A FGC42652 YY+
19378514-C-T 17266634-C-T FGC42653 YY+
19477919-C-A 17366039-C-A FGC42654 YY+
15223080-T-C 13111166-T-C FGC42646 Y+
18112710-T-A 16000830-T-A FGC42649 YY+
28080918-G-C 25934771-G-C FGC42656 P1_Y2 *
16978862-C-A 14866982-C-A **
14121521-G-A 12000815-G-A **
5240956-T-TTCCC 5372915-T-TTCCC 5×TCCC**
16352454-C-A 14240574-C-A **
16322910-G-T 14211030-G-T **
14391129-G-T 12270425-G-T **
16024252-T-C 13912372-T-C **
24485730-A-T 22339583-A-T **
15856572-T-C 13744692-T-C **
58862765-A-G 56728106-T-C **
4976775-T-G 5108734-T-G **
58986184-C-G 56840037-C-G **
14656131-C-G 12544196-C-G **
15278880-T-C 13166979-T-C **
58862812-T-G 56728059-A-C **
58986163-T-A 56840016-T-A **
17025770-G-T 14913890-G-T **
24485755-A-T 22339608-A-T **
13293243-A-G 11137567-A-G **
18035803-G-A 15923923-G-A **
24387404-A-G 22241257-A-G **
18727638-G-T 16615758-G-T **
19319834-G-GTATA 17207954-G-GTATA 23×TA**
24387386-C-T 22241239-C-T **
13293176-C-A 11137500-C-A **
18727668-G-T 16615788-G-T **
58986169-A-C 56840022-A-C **
26204854-T-A 24058707-T-A FGC15632 P1_Y1 **
18035781-C-T 15923901-C-T **
21421790-GA-G 19259904-GA-G **
24387347-CATAT-C 22241200-CATAT-C **
15645178-GTTT-G 13533298-GTTT-G **
22447907-A-T 20286021-A-T DYZ19 **
58908961-A-G 56681910-T-C **
13466740-C-A 11311064-C-A **
22467193-C-A 20305307-C-A DYZ19 **
18883955-C-CATCT 16772075-C-CATCT 6×ATCT**
22360189-C-G 20198303-C-G DYZ19 ***
22358243-G-T 20196357-G-T DYZ19 ***
22352473-A-T 20190587-A-T DYZ19 ***
22490168-C-A 20328282-C-A DYZ19 ***
22481264-G-C 20319378-G-C DYZ19 ***
22481280-T-C 20319394-T-C DYZ19 ***
22481279-C-A 20319393-C-A DYZ19 ***
22481262-G-A 20319376-G-A DYZ19 ***
22481255-C-G 20319369-C-G DYZ19 ***
22481178-A-G 20319292-A-G DYZ19 ***
22367597-T-G 20205711-T-G DYZ19 ***
22450191-A-T 20288305-A-T DYZ19 ***
22452440-T-G 20290554-T-G DYZ19 ***
22481176-C-A 20319290-C-A DYZ19 ***
22481128-G-T 20319242-G-T DYZ19 ***
22498899-A-T 20337013-A-T DYZ19 ***
23230917-C-T 21069031-C-T ***
22503353-G-C 20341467-G-C DYZ19 ***
24013652-G-A 21867505-G-A ***
24862106-C-A 22715959-C-A P3_b2 ***
24753061-G-T 22606914-G-T P3_b2 ***
24705741-G-T 22559594-G-T P3_b2 ***
24686530-A-T 22540383-A-T P3_b2 ***
24595301-T-C 22449154-T-C P3_t2 ***
24490170-G-T 22344023-G-T ***
24387334-C-T 22241187-C-T ***
24283301-C-A 22137154-C-A P3_t1 ***
24181679-T-A 22035532-T-A P3_b1 ***
24126032-C-A 21979885-C-A P3_b1 ***
24110064-T-C 21963917-T-C P3_b1 ***
24073490-A-T 21927343-A-T P3_b1 ***
24073487-G-T 21927340-G-T P3_b1 ***
23660898-A-G 21499012-A-G ***
22503355-G-T 20341469-G-T DYZ19 ***
23519304-G-T 21357418-G-T ***
23318061-C-T 21156175-C-T ***
23318058-A-T 21156172-A-T ***
23192414-A-G 21030528-A-G ***
22777150-T-A 20615264-T-A ***
22757267-T-A 20595381-T-A ***
22545577-A-G 20383691-A-G ***
22504529-G-T 20342643-G-T DYZ19 ***
22503683-T-C 20341797-T-C DYZ19 ***
22503669-C-T 20341783-C-T DYZ19 ***
22503661-C-G 20341775-C-G DYZ19 ***
22503658-A-G 20341772-A-G DYZ19 ***
22503368-T-G 20341482-T-G DYZ19 ***
22349721-A-T 20187835-A-T DYZ19 ***
22287090-TA-T 20125204-TA-T DYZ19 ***
22349424-T-A 20187538-T-A DYZ19 ***
20998190-T-C 18836304-T-C P4_Dst ***
22223940-T-C 20062054-T-C DYZ19 ***
22204050-C-A 20042164-C-A ***
21579442-A-T 19417556-A-T ***
21578220-A-G 19416334-A-G ***
21574072-C-T 19412186-C-T ***
21448275-G-A 19286389-G-A ***
21448202-C-T 19286316-C-T ***
21448017-C-T 19286131-C-T ***
21409196-C-A 19247310-C-A ***
21119620-A-T 18957734-A-T ***
21012759-T-C 18850873-T-C P4_Dst ***
20998263-T-G 18836377-T-G P4_Dst ***
20908822-G-A 18746936-G-A P4_Dst ***
22237134-A-G 20075248-A-G DYZ19 ***
20887947-A-G 18726061-A-G P4_Dst ***
20865944-T-C 18704058-T-C P4_Dst ***
20426452-G-T 18264566-G-T P5_Dst ***
20425318-G-T 18263432-G-T P5_Dst ***
20408273-T-C 18246387-T-C P5_Dst ***
20330945-G-C 18169059-G-C P5_Dst ***
20329994-T-A 18168108-T-A P5_Dst ***
20306729-C-T 18144843-C-T P5_Dst ***
20084893-A-T 17973013-A-T P5_Dst ***
20084536-G-T 17972656-G-T P5_Dst ***
20062497-T-C 17950617-T-C P5_Prx ***
19845514-A-T 17733634-A-T P5_Prx ***
19815974-T-C 17704094-T-C P5_Prx ***
22223951-T-G 20062065-T-G DYZ19 ***
22237162-A-T 20075276-A-T DYZ19 ***
22349408-C-G 20187522-C-G DYZ19 ***
22311210-A-T 20149324-A-T DYZ19 ***
22341973-A-T 20180087-A-T DYZ19 ***
22341972-G-T 20180086-G-T DYZ19 ***
22341934-G-C 20180048-G-C DYZ19 ***
22341688-G-T 20179802-G-T DYZ19 ***
22341578-G-T 20179692-G-T DYZ19 ***
22341180-G-A 20179294-G-A DYZ19 ***
22341179-A-T 20179293-A-T DYZ19 ***
22341173-G-A 20179287-G-A DYZ19 ***
22341168-C-A 20179282-C-A DYZ19 ***
22333334-A-T 20171448-A-T DYZ19 ***
22330456-T-A 20168570-T-A DYZ19 ***
22311232-T-A 20149346-T-A DYZ19 ***
24935409-C-T 22789262-C-T g1 ***
22237163-C-T 20075277-C-T DYZ19 ***
22311209-C-G 20149323-C-G DYZ19 ***
22311178-T-A 20149292-T-A DYZ19 ***
22305961-G-A 20144075-G-A DYZ19 ***
22305946-A-G 20144060-A-G DYZ19 ***
22297133-C-A 20135247-C-A DYZ19 ***
22292844-A-G 20130958-A-G DYZ19 ***
22283232-A-T 20121346-A-T DYZ19 ***
22283226-C-T 20121340-C-T DYZ19 ***
22283221-T-G 20121335-T-G DYZ19 ***
22283206-G-T 20121320-G-T DYZ19 ***
22252528-C-A 20090642-C-A DYZ19 ***
22252524-C-T 20090638-C-T DYZ19 ***
22248543-T-A 20086657-T-A DYZ19 ***
24896528-G-T 22750381-G-T g1 ***
25377298-G-T 23231151-G-T P2_r2 ***
24970519-C-A 22824372-C-A g1 ***
4167657-CAAAAAAA-C 4299616-CAAAAAAA-C 18×A***
17005659-C-CG 14893779-C-CG 10×G***
19261150-C-TT 17149270-C-TT ***
15658212-CGT-C 13546332-CGT-C ***
24387413-CCA-C 22241266-CCA-C ***
2903290-CCTTC-T 3035249-CCTTC-T ***
3930604-TAC-T 4062563-TAC-T ***
4650472-GATAT-G 4782431-GATAT-G 24×AT***
16344410-C-CTTCTTT 14232530-C-CTTCTTT ***
4826400-T-TTATA 4958359-T-TTATA 22×TA***
5028088-T-TAATAG 5160047-T-TAATAG ***
7545015-G-GT 7676974-G-GT ***
8125069-G-GGGAAA 8257028-G-GGGAAA ***
8468065-CAAAAAAAAAA-C 8600024-CAAAAAAAAAA-C 24×A***
9654338-AGAAAGAAAG-GATAGAAAGAAAGAAAGA 9816729-AGAAAGAAAG-GATAGAAAGAAAGAAAGA IR3_Prx ***
13255809-TG-T 11100133-TG-T 12×G***
58913987-C-G 56676884-G-C ***
13385079-CT-C 11229403-CT-C 14×T***
58885575-C-T 56705296-G-A ***
58873405-G-C 56717466-C-G ***
58876842-C-A 56714029-G-T ***
58876869-A-C 56714002-T-G ***
58877320-A-T 56713551-T-A ***
58879502-T-C 56711369-A-G ***
58882052-A-C 56708819-T-G ***
58887820-C-T 56703051-G-A ***
58913913-G-T 56676958-C-A ***
58891022-A-T 56699849-T-A ***
58898719-A-T 56692152-T-A ***
58899421-A-C 56691450-T-G ***
58899434-A-T 56691437-T-A ***
58903002-A-T 56687869-T-A ***
58913899-A-G 56676972-T-C ***
13194516-ATTCCAT-A 11038840-ATTCCAT-A ***
13454810-T-TCCATC 11299134-T-TCCATC ***
58869487-A-T 56721384-T-A ***
24232042-ACTCT-CCTCC 22085895-ACTCT-CCTCC P3_b1 ***
21464204-G-GAAAGAAAA 19302318-G-GAAAGAAAA ***
21464210-A-AAGAAAGAG 19302324-A-AAGAAAGAG ***
22341149-CTTCT-GTTCA 20179263-CTTCT-GTTCA DYZ19 ***
22341179-AG-TA 20179293-AG-TA DYZ19 ***
22358173-TTTCG-GTACA 20196287-TTTCG-GTACA DYZ19 ***
22481124-TTATG-GTATT 20319238-TTATG-GTATT DYZ19 ***
24232072-CAAC-AAAA 22085925-CAAC-AAAA P3_b1 ***
19486859-CTTTTT-C 17374979-CTTTTT-C 16×T***
27483131-TG-CA 25336984-TG-CA P1_Y2 ***
58829352-TCGA-ATGC 56761516-TCGA-GCAT ***
58844979-TCCATTTGATGCCATC-T 56745872-CATGGGATGGCATCAA-C ***
58908884-CCATTCCATTCCATTCCATTG-C 56681952-CAATGGAATGGAATGCAATGG-C ***
58980036-CCACG-TCACT 56833889-CCACG-TCACT ***
58986163-TGCCTAA-AGCTTAC 56840016-TGCCTAA-AGCTTAC ***
19500593-G-GAGAAAGAAAGAAAGAA 17388713-G-GAGAAAGAAAGAAAGAA 15×AGAA***
17991090-ATA-TT 15879210-ATA-TT P7_Prx ***
13454818-A-ATTCCT 11299142-A-ATTCCT ***
14610887-A-ACATG 12499093-A-ACATG ***
13471944-GGGC-CGGT 11316268-GGGC-CGGT ***
13471993-CCTGC-GCTGT 11316317-CCTGC-GCTGT ***
13472003-TGG-AGA 11316327-TGG-AGA ***
13730698-AT-TA 11575022-AT-TA ***
13733865-ACGAGCGCAA-TGGACCACAT 11578189-ACGAGCGCAA-TGGACCACAT ***
13983583-G-GAAGTAAGC 11862877-G-GAAGTAAGC ***
14610903-A-ACATG 12499109-A-ACATG ***
17991069-ATATATAT-A 15879189-ATATATAT-A P7_Prx ***
14610908-C-CATAG 12499114-C-CATAG ***
14645416-TTTTG-T 12533480-TTTTG-T ***
15491537-C-CA 13379657-C-CA ***
17274965-G-GATAT 15163085-G-GATAT ***
17274967-T-TAGAA 15163087-T-TAGAA ***
17274975-T-TAGAC 15163095-T-TAGAC ***
17274979-T-TAGAA 15163099-T-TAGAA ***
58873182-A-T 56717689-T-A ***
58867977-G-T 56722894-C-A ***
24970677-G-T 22824530-G-T g1 ***
26124379-C-A 23978232-C-A P1_Y1 ***
25720495-G-A 23574348-G-A P1_b3 ***
25730056-C-A 23583909-C-A P1_b3 ***
25791963-T-C 23645816-T-C P1_b3 ***
25839384-G-A 23693237-G-A P1_b3 ***
26024766-G-T 23878619-G-T P1_Y1 ***
26065631-G-T 23919484-G-T P1_Y1 ***
26201643-G-T 24055496-G-T P1_Y1 ***
25628641-G-A 23482494-G-A P1_b3 ***
26228967-A-T 24082820-A-T P1_Y1 ***
26248621-C-A 24102474-C-A P1_Y1 ***
26263907-T-C 24117760-T-C P1_Y1 ***
26433613-A-T 24287466-A-T P1_Y1 ***
26466230-C-T 24320083-C-T P1_Y1 ***
26484123-G-A 24337976-G-A P1_Y1 ***
25628657-C-T 23482510-C-T P1_b3 ***
25628636-C-A 23482489-C-A P1_b3 ***
26810756-G-C 24664609-G-C P1_g2 ***
25296453-G-T 23150306-G-T P2_r1 ***
25056249-T-G 22910102-T-G g1 ***
25097126-C-T 22950979-C-T g1 ***
25176354-C-A 23030207-C-A g1 ***
25207736-T-A 23061589-T-A P2_r1 ***
25241352-C-A 23095205-C-A P2_r1 ***
25273901-C-T 23127754-C-T P2_r1 ***
25312568-T-G 23166421-T-G P2_r1 ***
25628503-A-T 23482356-A-T P1_b3 ***
25323140-G-T 23176993-G-T P2_r1 ***
25359645-C-A 23213498-C-A P2_r2 ***
19753431-G-T 17641551-G-T P5_Prx ***
25379803-T-C 23233656-T-C P2_r2 ***
25466190-C-A 23320043-C-A P2_r2 ***
25586875-T-A 23440728-T-A P1_gr1 ***
25628502-C-T 23482355-C-T P1_b3 ***
26500188-G-T 24354041-G-T P1_Y1 ***
27053909-G-A 24907762-G-A P1_r4 ***
58863794-G-T 56727077-C-A ***
28200838-C-T 26054691-C-T P1_b4 ***
27971698-C-A 25825551-C-A P1_Y2 ***
28018184-T-G 25872037-T-G P1_Y2 ***
28018651-A-T 25872504-A-T P1_Y2 ***
28022794-T-G 25876647-T-G P1_Y2 ***
28053787-G-T 25907640-G-T P1_Y2 ***
28063340-G-T 25917193-G-T P1_Y2 ***
28205368-G-T 26059221-G-T P1_b4 ***
27783436-T-A 25637289-T-A P1_Y2 ***
28246205-G-A 26100058-G-A P1_b4 ***
28281499-G-T 26135352-G-T P1_b4 ***
58829352-T-A 56761519-A-T ***
58837379-T-C 56753492-A-G ***
58837591-G-A 56753280-C-T ***
58845033-A-G 56745838-T-C ***
27916539-G-T 25770392-G-T P1_Y2 ***
27733707-T-A 25587560-T-A P1_Y2 ***
27060563-A-T 24914416-A-T P1_r4 ***
27585980-T-G 25439833-T-G P1_Y2 ***
27221877-T-A 25075730-T-A P1_g3 ***
27356859-T-A 25210712-T-A P1_g3 ***
27398082-T-A 25251935-T-A P1_g3 ***
27483132-G-A 25336985-G-A P1_Y2 ***
27553682-T-G 25407535-T-G P1_Y2 ***
27571237-G-T 25425090-G-T P1_Y2 ***
27593368-C-T 25447221-C-T P1_Y2 ***
27733610-T-G 25587463-T-G P1_Y2 ***
27608488-A-G 25462341-A-G P1_Y2 ***
27619088-G-C 25472941-G-C P1_Y2 ***
27619119-C-G 25472972-C-G P1_Y2 ***
27647241-T-C 25501094-T-C P1_Y2 ***
27663299-G-A 25517152-G-A P1_Y2 ***
27691554-T-A 25545407-T-A P1_Y2 ***
27692192-A-G 25546045-A-G P1_Y2 ***
19753483-A-C 17641603-A-C P5_Prx ***
17991092-A-T 15879212-A-T P7_Prx ***
19560889-C-T 17449009-C-T ***
22422749-G-T 20260863-G-T DYZ19 ***
22777146-C-T 20615260-C-T ***
58837227-G-A 56753644-C-T ***
13813881-C-G 11693175-C-G ***
22252530-T-G 20090644-T-G DYZ19 ***
22330382-G-C 20168496-G-C DYZ19 ***
13489725-C-T 11334049-C-T ***
22348874-A-T 20186988-A-T DYZ19 ***
13472035-A-G 11316359-A-G ***
22341368-G-A 20179482-G-A DYZ19 ***
22189214-G-A 20027328-G-A ***
24388082-A-ATT 22241935-A-ATT ***
13466719-G-A 11311043-G-A ***
13466712-G-T 11311036-G-T ***
22341930-T-C 20180044-T-C DYZ19 ***
58874004-A-C 56716867-T-G ***
22346833-T-A 20184947-T-A DYZ19 ***
6196837-G-A 6328796-G-A IR3_Dst ***
26170527-GGAA-G 24024380-GGAA-G P1_Y1 23×GAA***
22366592-T-C 20204706-T-C DYZ19 ***
22356760-GTCCATCACATA-TTCCTTCAGATG 20194874-GTCCATCACATA-TTCCTTCAGATG DYZ19 ***
15047301-T-TA 12935392-T-TA ***
13478281-ATCCG-CTCCT 11322605-ATCCG-CTCCT ***
28022799-T-G 25876652-T-G P1_Y2 ***
23415304-G-A 21253418-G-A ***
22297134-C-T 20135248-C-T DYZ19 ***
22262577-ATGT-GTGC 20100691-ATGT-GTGC DYZ19 ***
13472024-A-G 11316348-A-G ***
13472029-T-C 11316353-T-C ***
58876310-C-T 56714561-G-A ***
27483079-T-C 25336932-T-C P1_Y2 ***
5107325-T-A 5239284-T-A ***
7532276-GTATATA-G 7664235-GTATATA-G 28×TA***
4020185-T-C 4152144-T-C ***
4914863-T-C 5046822-T-C ***
4822500-G-T 4954459-G-T ***
4331844-G-A 4463803-G-A ***
4228156-G-T 4360115-G-T ***
4224043-G-A 4356002-G-A ***
4020224-T-C 4152183-T-C ***
4020217-A-G 4152176-A-G ***
4020215-T-C 4152174-T-C ***
4020214-A-G 4152173-A-G ***
4020211-T-G 4152170-T-G ***
4020208-T-C 4152167-T-C ***
4020200-A-T 4152159-A-T ***
4020198-T-G 4152157-T-G ***
4020192-G-C 4152151-G-C ***
4020184-G-T 4152143-G-T ***
2674448-T-G 2806407-T-G ***
4020176-T-A 4152135-T-A ***
4020170-A-C 4152129-A-C ***
3785724-G-C 3917683-G-C ***
3634304-T-G 3766263-T-G ***
3603659-G-A 3735618-G-A ***
3603646-C-A 3735605-C-A ***
3576229-A-G 3708188-A-G ***
3548701-G-C 3680660-G-C ***
3495467-G-T 3627426-G-T ***
3461923-C-T 3593882-C-T ***
3312175-A-G 3444134-A-G ***
3207279-A-C 3339238-A-C ***
3167013-G-A 3298972-G-A ***
2674597-C-A 2806556-C-A ***
22503322-G-A 20341436-G-A DYZ19 ***
9030408-AGAAAG-A 9192799-AGAAAG-A 17×GAAAG***
5107284-T-C 5239243-T-C ***
26538885-T-A 24392738-T-A P1_g2 ***
4848382-ATG-A 4980341-ATG-A ***
4158614-G-T 4290573-G-T ***
13257534-A-G 11101858-A-G Z11992 ***
13489724-C-A 11334048-C-A ***
22274188-G-T 20112302-G-T DYZ19 ***
13258700-A-G 11103024-A-G ***
13471969-CACTG-AACCA 11316293-CACTG-AACCA ***
13471960-CGCC-TGCT 11316284-CGCC-TGCT ***
5828966-AACACACAC-A 5960925-AACACACAC-A 22×AC***
22358609-A-C 20196723-A-C DYZ19 ***
14610673-A-C 12498875-A-C ***
22330090-T-G 20168204-T-G DYZ19 ***
22309078-G-A 20147192-G-A DYZ19 ***
3181857-CA-C 3313816-CA-C 20×A***
26262523-T-C 24116376-T-C P1_Y1 ***
7545014-G-GC 7676973-G-GC ***
20892325-G-GA 18730439-G-GA P4_Dst 11×A***
3970985-C-CT 4102944-C-CT 17×T***
22481326-G-C 20319440-G-C DYZ19 ***
24388091-T-TAA 22241944-T-TAA ***
22349435-C-G 20187549-C-G FGC15913 DYZ19 ***
22248537-T-A 20086651-T-A DYZ19 ***
22341971-A-T 20180085-A-T DYZ19 ***
22308503-C-A 20146617-C-A DYZ19 ***
13466720-A-T 11311044-A-T ***
25200983-GAAGGAAGA-G 23054836-GAAGGAAGA-G g1 ***
13488439-TG-CA 11332763-TG-CA ***
58869760-C-G 56721111-G-C ***
9574853-C-CA 9737244-C-CA IR3_Prx 12×A***
15491536-C-CA 13379656-C-CA ***
6040788-G-GAA 6172747-G-GAA ***
9429479-AT-A 9591870-AT-A ***
20084534-G-T 17972654-G-T P5_Dst ***
8901076-CAT-C 9033035-CAT-C 15×AT***
20084533-G-T 17972653-G-T P5_Dst ***
58843307-T-C 56747564-A-G FGC42762 ***
25246340-C-T 23100193-C-T P2_r1 ***
16978870-C-T 14866990-C-T Z9322 ***
13383525-C-G 11227849-C-G FGC39086 ***
13383095-T-G 11227419-T-G ***
13262097-A-G 11106421-A-G ***
8481197-T-A 8613156-T-A ***
22237153-A-T 20075267-A-T DYZ19 ***
22356884-T-A 20194998-T-A DYZ19 ***
22330453-G-T 20168567-G-T DYZ19 ***
26024841-G-C 23878694-G-C GG046 P1_Y1 ***
13488308-T-G 11332632-T-G ***
19409391-CAA-C 17297511-CAA-C 22×A***
22450153-A-C 20288267-A-C DYZ19 ***
13223678-T-G 11068002-T-G ***
6903421-G-C 7035380-G-C ***
13488440-G-A 11332764-G-A ***
58869341-T-C 56721530-A-G ***
26500451-A-C 24354304-A-C FGC29871 P1_Y1 23×AC***
26465969-T-A 24319822-T-A P1_Y1 ***
22237289-A-C 20075403-A-C DYZ19 ***
22237270-A-C 20075384-A-C DYZ19 ***
22237258-G-A 20075372-G-A DYZ19 ***
15557157-ATATATT-A 13445277-ATATATT-A ***
13518902-T-C 11363226-T-C ***
13518879-C-G 11363203-C-G ***
13383653-A-T 11227977-A-T ***
13383638-C-G 11227962-C-G ***
13383604-C-A 11227928-C-A ***
5107283-G-T 5239242-G-T ***
5107301-C-T 5239260-C-T ***
19487412-G-A 17375532-G-A ***
14178677-A-G 12057971-A-G ***
15629354-G-A 13517474-G-A ***
15626626-G-T 13514746-G-T ***
15626596-G-T 13514716-G-T ***
15297349-T-G 13185448-T-G ***
15297333-G-T 13185432-G-T ***
15242818-G-T 13130904-G-T ***
15221308-T-A 13109394-T-A ***
15221291-A-G 13109377-A-G ***
15101471-C-A 12989559-C-A ***
14625046-C-A 12513246-C-A ***
14564755-T-A 12452955-T-A ***
14467331-T-C 12346600-T-C ***
14307179-G-T 12186473-G-T ***
14304196-A-T 12183490-A-T ***
14114177-C-T 11993471-C-T ***
15889263-G-A 13777383-G-A ***
13978820-C-A 11858114-C-A ***
13910256-G-T 11789550-G-T ***
13735703-A-G 11580027-A-G ***
13729784-C-T 11574108-C-T ***
13726699-G-T 11571023-G-T ***
13722266-T-A 11566590-T-A ***
13645509-G-T 11489833-G-T ***
13596465-C-T 11440789-C-T ***
13583737-G-T 11428061-G-T ***
13549177-T-A 11393501-T-A ***
13549076-C-A 11393400-C-A ***
13489898-C-A 11334222-C-A ***
13489887-A-T 11334211-A-T ***
13489881-G-A 11334205-G-A ***
15804018-G-T 13692138-G-T ***
15889434-G-A 13777554-G-A ***
13489815-C-T 11334139-C-T ***
17724273-T-A 15612393-T-A ***
19487374-C-T 17375494-C-T ***
19487356-G-C 17375476-G-C ***
19310723-C-T 17198843-C-T ***
19012901-T-A 16901021-T-A ***
18959242-T-A 16847362-T-A ***
18875517-T-C 16763637-T-C ***
18622793-A-C 16510913-A-C ***
18542569-A-C 16430689-A-C ***
18366960-C-A 16255080-C-A P6_Prx ***
18274707-G-T 16162827-G-T P6_Prx ***
18230358-T-C 16118478-T-C ***
18135572-A-T 16023692-A-T ***
13488304-G-A 11332628-G-A ***
17757235-A-C 15645355-A-C ***
17724267-A-G 15612387-A-G ***
15891808-T-C 13779928-T-C ***
17724266-C-T 15612386-C-T ***
17724248-G-A 15612368-G-A ***
17724235-A-T 15612355-A-T ***
17724229-T-C 15612349-T-C ***
17162335-A-T 15050455-A-T ***
17126212-G-A 15014332-G-A ***
17030650-A-C 14918770-A-C ***
17006286-G-T 14894406-G-T ***
16978873-A-G 14866993-A-G ***
16881557-A-T 14769677-A-T ***
16686835-A-T 14574955-A-T ***
15963222-G-T 13851342-G-T ***
15960760-G-T 13848880-G-T ***
15960471-A-C 13848591-A-C ***
13489819-G-A 11334143-G-A ***
13489804-C-T 11334128-C-T ***
5107303-T-C 5239262-T-C ***
6196875-T-A 6328834-T-A IR3_Dst ***
9189547-A-G 9351938-A-G ***
8276534-G-T 8408493-G-T ***
8276506-C-G 8408465-C-G ***
8276493-C-A 8408452-C-A ***
8276490-C-T 8408449-C-T ***
7491137-C-A 7623096-C-A IR1_L ***
7443872-T-A 7575831-T-A ***
7440101-T-C 7572060-T-C ***
7142102-T-G 7274061-T-G ***
7060037-C-T 7191996-C-T ***
6903471-G-A 7035430-G-A ***
6597329-G-A 6729288-G-A ***
6313134-C-A 6445093-C-A IR3_Dst ***
6196881-A-T 6328840-A-T IR3_Dst ***
6196868-G-A 6328827-G-A IR3_Dst ***
9191071-T-C 9353462-T-C ***
6196836-T-C 6328795-T-C IR3_Dst ***
6196830-A-C 6328789-A-C IR3_Dst ***
6196829-C-T 6328788-C-T IR3_Dst ***
6196810-A-G 6328769-A-G IR3_Dst ***
6178098-A-G 6310057-A-G IR3_Dst ***
6170980-C-T 6302939-C-T IR3_Dst ***
6157893-C-T 6289852-C-T IR3_Dst ***
6155591-T-A 6287550-T-A IR3_Dst ***
6040775-G-A 6172734-G-A ***
5806462-T-A 5938421-T-A ***
5196276-G-A 5328235-G-A ***
5196262-T-G 5328221-T-G ***
5107313-G-C 5239272-G-C ***
5107306-A-G 5239265-A-G ***
9191051-T-C 9353442-T-C ***
9308523-C-T 9470914-C-T ***
13489771-G-T 11334095-G-T ***
13340625-G-T 11184949-G-T ***
13489769-C-A 11334093-C-A ***
13489765-T-C 11334089-T-C ***
13489743-C-T 11334067-C-T ***
13489738-C-T 11334062-C-T ***
13489717-C-T 11334041-C-T ***
13489702-C-T 11334026-C-T ***
13489607-G-A 11333931-G-A ***
13472014-C-T 11316338-C-T ***
13472005-G-A 11316329-G-A ***
13471997-C-T 11316321-C-T ***
13471993-C-G 11316317-C-G ***
13471198-C-T 11315522-C-T ***
13459591-G-T 11303915-G-T ***
13361655-G-T 11205979-G-T ***
13267644-A-T 11111968-A-T ***
9355206-A-T 9517597-A-T ***
13253137-A-G 11097461-A-G ***
13194521-A-C 11038845-A-C ***
10009178-A-T 10171569-A-T ***
9998165-A-T 10160556-A-T ***
9946368-C-T 10108759-C-T ***
9779313-A-C 9941704-A-C ***
9719190-T-C 9881581-T-C IR3_Prx ***
9699647-C-A 9862038-C-A IR3_Prx ***
9674825-A-T 9837216-A-T IR3_Prx ***
9674804-G-T 9837195-G-T IR3_Prx ***
9673766-A-T 9836157-A-T IR3_Prx ***
9617365-G-T 9779756-G-T IR3_Prx ***
9525924-T-C 9688315-T-C ***
9362310-G-C 9524701-G-C ***
59022603-AAAC-A 56876456-AAAC-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Haplotype Progression

The data below reveals the progression of changes in the haplotype. The bottom row is the haplotype for this man and above him are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are very much a work in progress, and any suggested modifications are appreciated. I think we can use our vast collection of haplotype data to refine these haplotypes. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
P312/S1161324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123315916122626191211131210912121011113012132413101020151913241712152412231810141791211
L21/S1451324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123515916122526191211131211912121011113012132413101020151913241712152412231810141791211
Ross1325141111-13121212131430179-910112515183016-16-17-17111119-231716191739-39121211915-1681010810101221-23161012121781225201312111311111212

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: GNSTN*16000000100000008300000
Used in age calculations16000000100000008300000
Counts of SNPs1615
Variant counts last updated 2018-01-20 16:30:08.

* BED data not available. Using default values.


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