Gray
FGC: XFEFM, FTDNA: N113849, YSEQ: 638Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FGC XFEFM |
---|---|---|---|---|---|---|---|---|
4547679-G-A | 4679638-G-A | FGC42410 | + | |||||
8725253-G-A | 8857212-G-A | FGC42411 | Y | Y | + | |||
9384786-C-G | 9547177-C-G | FGC42412 | Y | + | ||||
9693106-T-C | 9855497-T-C | FGC42413 | IR3_Prx | + | ||||
18185124-C-T | 16073244-C-T | FGC42415 | Y | + | ||||
19035798-A-C | 16923918-A-C | FGC42416 | Y | Y | + | |||
23013635-C-T | 20851749-C-T | FGC42418 | Y | Y | + | |||
24877609-G-C | 22731462-G-C | FGC42420 | g1 | + | ||||
24879371-G-T | 22733224-G-T | FGC42421 | g1 | + | ||||
28580874-A-G | 26434727-A-G | FGC42422 FTB13671 | + | |||||
28728750-A-AT | 26582603-A-AT | + | ||||||
22359143-G-C | 20197257-G-C | FGC42417 | DYZ19 | * | ||||
24188630-C-G | 22042483-C-G | FGC42419 | P3_b1 | * | ||||
6091759-TA-T | 6223718-TA-T | * | ||||||
19425267-T-A | 17313387-T-A | ** | ||||||
8666801-G-A | 8798760-G-A | ** | ||||||
13339784-T-C | 11184108-T-C | ** | ||||||
13393000-A-T | 11237324-A-T | ** | ||||||
15102613-C-T | 12990701-C-T | ** | ||||||
15187635-C-T | 13075721-C-T | ** | ||||||
15187681-T-A | 13075767-T-A | ** | ||||||
15247658-G-A | 13135744-G-A | ** | ||||||
15884145-G-T | 13772265-G-T | ** | ||||||
17700080-C-T | 15588200-C-T | ** | ||||||
17700084-T-C | 15588204-T-C | ** | ||||||
17700085-G-A | 15588205-G-A | ** | ||||||
17700086-T-C | 15588206-T-C | ** | ||||||
18190399-G-A | 16078519-G-A | YFS1386777 | ** | |||||
18190400-A-T | 16078520-A-T | YFS1386778 | ** | |||||
19425268-C-G | 17313388-C-G | ** | ||||||
19425269-A-T | 17313389-A-T | ** | ||||||
19425280-C-G | 17313400-C-G | ** | ||||||
19425281-A-G | 17313401-A-G | ** | ||||||
21631609-G-A | 19469723-G-A | ** | ||||||
22151317-A-G | 19989431-A-G | ** | ||||||
22164262-A-G | 20002376-A-G | YFS1386831 FTB20469 | ** | |||||
22164269-C-A | 20002383-C-A | YFS1386832 FTB20470 | ** | |||||
22457252-T-G | 20295366-T-G | DYZ19 | ** | |||||
23102783-A-T | 20940897-A-T | ** | ||||||
24375348-G-A | 22229201-G-A | ** | ||||||
25181764-C-G | 23035617-C-G | g1 | ** | |||||
28794830-C-G | 26648683-C-G | ** | ||||||
58856356-T-G | 56734515-A-C | ** | ||||||
58862646-G-C | 56728225-C-G | ** | ||||||
3822962-GATATATAT-G | 3954921-GATATATAT-G | 26×AT | ** | |||||
5936159-GAT-G | 6068118-GAT-G | 19×AT | ** | |||||
13585500-GGC-G | 11429824-GGC-G | ** | ||||||
17231048-GA-G | 15119168-GA-G | ** | ||||||
17895992-T-TA | 15784112-T-TA | ** | ||||||
23134163-TTGTTAAAACCTC-T | 20972277-TTGTTAAAACCTC-T | ** | ||||||
23293596-GTGTATATA-G | 21131710-GTGTATATA-G | ** | ||||||
13724011-G-T | 11568335-G-T | *** | ||||||
13724013-G-C | 11568337-G-C | *** | ||||||
14407185-T-C | 12286483-T-C | A7241 | *** | |||||
22360342-G-C | 20198456-G-C | DYZ19 | *** | |||||
22360334-CGAA-AGAC | 20198448-CGAA-AGAC | DYZ19 | *** | |||||
22504690-C-A | 20342804-C-A | DYZ19 | *** | |||||
13445465-CA-GG | 11289789-CA-GG | *** | ||||||
13258251-GAC-TA | 11102575-GAC-TA | *** | ||||||
22293342-TT-GA | 20131456-TT-GA | DYZ19 | *** | |||||
58910951-G-T | 56679920-C-A | *** | ||||||
22297736-T-A | 20135850-T-A | DYZ19 | *** | |||||
24388090-A-ATC | 22241943-A-ATC | *** | ||||||
22234939-C-A | 20073053-C-A | DYZ19 | *** | |||||
15290982-C-T | 13179081-C-T | 17×T | *** | |||||
5486876-C-A | 5618835-C-A | 21×A | *** | |||||
3432966-TTATA-T | 3564925-TTATA-T | 10×TA | *** | |||||
22292005-C-T | 20130119-C-T | DYZ19 | *** | |||||
28008591-C-A | 25862444-C-A | P1_Y2 | 11×A | *** | ||||
22505127-A-G | 20343241-A-G | DYZ19 | *** | |||||
5224862-A-G | 5356821-A-G | *** | ||||||
17275763-G-GAAGGA | 15163883-G-GAAGGA | *** | ||||||
22322768-A-C | 20160882-A-C | DYZ19 | *** | |||||
24387108-C-A | 22240961-C-A | *** | ||||||
20332069-T-A | 18170183-T-A | P5_Dst | *** | |||||
22332915-A-T | 20171029-A-T | DYZ19 | *** | |||||
58876979-G-C | 56713892-C-G | *** | ||||||
22333380-C-G | 20171494-C-G | DYZ19 | *** | |||||
5477636-C-A | 5609595-C-A | *** | ||||||
22322368-C-T | 20160482-C-T | DYZ19 | *** | |||||
22223821-G-T | 20061935-G-T | DYZ19 | *** | |||||
22234967-G-A | 20073081-G-A | DYZ19 | *** | |||||
22422143-G-A | 20260257-G-A | DYZ19 | *** | |||||
28602532-A-G | 26456385-A-G | *** | ||||||
58830228-A-C | 56760643-T-G | *** | ||||||
13203875-CAT-GAG | 11048199-CAT-GAG | *** | ||||||
13472473-ACCCTGGC-CCCTTG | 11316797-ACCCTGGC-CCCTTG | *** | ||||||
13486822-CAGT-AAGG | 11331146-CAGT-AAGG | *** | ||||||
20426270-C-G | 18264384-C-G | P5_Dst | *** | |||||
58853569-ATTCCA-T | 56737297-TGGAAT-A | *** | ||||||
22300886-C-T | 20139000-C-T | DYZ19 | *** | |||||
13742278-T-C | 11586602-T-C | *** | ||||||
22229450-G-A | 20067564-G-A | DYZ19 | *** | |||||
27528893-C-A | 25382746-C-A | P1_Y2 | *** | |||||
58889128-C-G | 56701743-G-C | *** | ||||||
6226038-TTCTA-T | 6357997-TTCTA-T | IR3_Dst | *** | |||||
26310780-C-T | 24164633-C-T | P1_Y1 | *** | |||||
58860578-C-G | 56730293-G-C | *** | ||||||
58846435-C-T | 56744436-G-A | *** | ||||||
58971885-T-TGTAC | 56825738-T-TGTAC | *** | ||||||
58833554-G-A | 56757317-C-T | *** | ||||||
21940037-C-CATAT | 19778151-C-CATAT | 22×AT | *** | |||||
22431581-A-T | 20269695-A-T | DYZ19 | *** | |||||
13489132-CTGGC-ACGGT | 11333456-CTGGC-ACGGT | *** | ||||||
20084617-A-T | 17972737-A-T | P5_Dst | *** | |||||
20084826-A-T | 17972946-A-T | P5_Dst | *** | |||||
20084916-A-T | 17973036-A-T | P5_Dst | *** | |||||
27586161-A-T | 25440014-A-T | P1_Y2 | *** | |||||
22300885-C-A | 20138999-C-A | DYZ19 | *** | |||||
9075188-C-T | 9237579-C-T | 20×T | *** | |||||
58910759-C-T | 56680112-G-A | *** | ||||||
58874709-C-G | 56716162-G-C | *** | ||||||
58886938-T-G | 56703933-A-C | *** | ||||||
22366077-T-C | 20204191-T-C | DYZ19 | *** | |||||
22499876-G-T | 20337990-G-T | DYZ19 | *** | |||||
5404762-C-T | 5536721-C-T | *** | ||||||
22341375-G-T | 20179489-G-T | DYZ19 | *** | |||||
22341305-C-A | 20179419-C-A | DYZ19 | *** | |||||
2877738-G-A | 3009697-G-A | *** | ||||||
2922121-G-T | 3054080-G-T | *** | ||||||
3512034-G-T | 3643993-G-T | *** | ||||||
3534589-C-T | 3666548-C-T | *** | ||||||
3536744-G-T | 3668703-G-T | *** | ||||||
3561455-T-C | 3693414-T-C | *** | ||||||
4118710-T-A | 4250669-T-A | *** | ||||||
4220850-C-T | 4352809-C-T | *** | ||||||
4619463-C-T | 4751422-C-T | *** | ||||||
4699174-A-G | 4831133-A-G | *** | ||||||
4726153-C-A | 4858112-C-A | *** | ||||||
4794938-C-T | 4926897-C-T | *** | ||||||
4822765-C-A | 4954724-C-A | *** | ||||||
5231926-G-T | 5363885-G-T | *** | ||||||
5235464-G-T | 5367423-G-T | *** | ||||||
5378158-T-C | 5510117-T-C | *** | ||||||
5378176-C-A | 5510135-C-A | *** | ||||||
5430807-T-A | 5562766-T-A | *** | ||||||
5785652-G-A | 5917611-G-A | *** | ||||||
5813484-C-T | 5945443-C-T | *** | ||||||
6041333-G-T | 6173292-G-T | *** | ||||||
6089624-A-T | 6221583-A-T | *** | ||||||
6150412-G-T | 6282371-G-T | IR3_Dst | *** | |||||
6252817-C-T | 6384776-C-T | IR3_Dst | *** | |||||
6310594-C-A | 6442553-C-A | IR3_Dst | *** | |||||
6311649-G-T | 6443608-G-T | IR3_Dst | *** | |||||
6312675-G-A | 6444634-G-A | IR3_Dst | *** | |||||
6558242-C-A | 6690201-C-A | *** | ||||||
6559699-G-T | 6691658-G-T | *** | ||||||
6565437-T-A | 6697396-T-A | *** | ||||||
6713136-G-C | 6845095-G-C | *** | ||||||
7001973-G-T | 7133932-G-T | *** | ||||||
7118160-G-A | 7250119-G-A | *** | ||||||
7474934-C-T | 7606893-C-T | IR1_L | *** | |||||
7966634-C-G | 8098593-C-G | *** | ||||||
8213903-A-G | 8345862-A-G | *** | ||||||
8321802-G-T | 8453761-G-T | *** | ||||||
8786123-T-G | 8918082-T-G | *** | ||||||
9200079-A-T | 9362470-A-T | *** | ||||||
9200152-C-A | 9362543-C-A | *** | ||||||
9351221-C-A | 9513612-C-A | *** | ||||||
9472405-A-T | 9634796-A-T | *** | ||||||
9545048-A-T | 9707439-A-T | IR3_Prx | *** | |||||
9577591-C-T | 9739982-C-T | IR3_Prx | *** | |||||
9623662-A-C | 9786053-A-C | IR3_Prx | *** | |||||
9699663-C-A | 9862054-C-A | IR3_Prx | *** | |||||
9782352-A-T | 9944743-A-T | *** | ||||||
9784304-G-T | 9946695-G-T | *** | ||||||
9804531-T-A | 9966922-T-A | *** | ||||||
9890362-A-G | 10052753-A-G | *** | ||||||
9910803-T-G | 10073194-T-G | *** | ||||||
9911018-C-T | 10073409-C-T | *** | ||||||
9976681-G-T | 10139072-G-T | *** | ||||||
9976682-A-T | 10139073-A-T | *** | ||||||
10033766-G-A | 10196157-G-A | *** | ||||||
10033910-G-C | 10196301-G-C | *** | ||||||
10037230-A-G | 10199621-A-G | *** | ||||||
10047233-C-A | 10209624-C-A | *** | ||||||
13114882-T-C | 10604368-T-C | *** | ||||||
13254191-C-T | 11098515-C-T | *** | ||||||
13254604-T-G | 11098928-T-G | *** | ||||||
13261315-C-T | 11105639-C-T | *** | ||||||
13311796-C-T | 11156120-C-T | *** | ||||||
13341563-C-T | 11185887-C-T | *** | ||||||
13461066-G-A | 11305390-G-A | *** | ||||||
13462150-T-G | 11306474-T-G | *** | ||||||
13466482-G-A | 11310806-G-A | *** | ||||||
13470558-C-T | 11314882-C-T | *** | ||||||
13470561-T-A | 11314885-T-A | *** | ||||||
13470568-C-G | 11314892-C-G | *** | ||||||
13489132-C-A | 11333456-C-A | *** | ||||||
13489133-T-C | 11333457-T-C | *** | ||||||
13489205-T-A | 11333529-T-A | *** | ||||||
13489206-C-A | 11333530-C-A | *** | ||||||
13489215-C-A | 11333539-C-A | *** | ||||||
13489309-G-A | 11333633-G-A | *** | ||||||
13489310-G-T | 11333634-G-T | *** | ||||||
13489329-C-G | 11333653-C-G | *** | ||||||
13548959-A-G | 11393283-A-G | *** | ||||||
13549002-A-G | 11393326-A-G | *** | ||||||
13563376-G-T | 11407700-G-T | *** | ||||||
13593712-T-A | 11438036-T-A | *** | ||||||
13600600-C-A | 11444924-C-A | *** | ||||||
13606668-G-A | 11450992-G-A | *** | ||||||
13606671-T-A | 11450995-T-A | *** | ||||||
13645333-A-T | 11489657-A-T | *** | ||||||
13726798-G-T | 11571122-G-T | *** | ||||||
13726799-G-T | 11571123-G-T | *** | ||||||
13740786-T-G | 11585110-T-G | *** | ||||||
13740798-G-C | 11585122-G-C | *** | ||||||
13744283-A-T | 11588607-A-T | *** | ||||||
13833483-A-G | 11712777-A-G | *** | ||||||
14058898-G-A | 11938192-G-A | YFS1386713 FTB20464 | *** | |||||
14261239-G-A | 12140533-G-A | *** | ||||||
14390993-G-T | 12270289-G-T | *** | ||||||
14549183-G-T | 12437384-G-T | *** | ||||||
14565116-T-C | 12453316-T-C | *** | ||||||
14565118-A-C | 12453318-A-C | *** | ||||||
14656116-G-T | 12544181-G-T | *** | ||||||
14661304-T-C | 12549369-T-C | *** | ||||||
14725907-G-C | 12613975-G-C | *** | ||||||
14737216-C-T | 12625284-C-T | *** | ||||||
14989081-T-A | 12877147-T-A | *** | ||||||
15117091-A-C | 13005178-A-C | *** | ||||||
15141197-G-A | 13029284-G-A | *** | ||||||
15300791-C-A | 13188890-C-A | *** | ||||||
15300792-T-C | 13188891-T-C | *** | ||||||
15629135-G-T | 13517255-G-T | *** | ||||||
15630762-T-C | 13518882-T-C | *** | ||||||
16067735-C-A | 13955855-C-A | *** | ||||||
16498505-G-T | 14386625-G-T | *** | ||||||
16720114-G-T | 14608234-G-T | *** | ||||||
16738981-T-G | 14627101-T-G | *** | ||||||
16834770-A-G | 14722890-A-G | *** | ||||||
16997367-A-G | 14885487-A-G | *** | ||||||
17085294-T-C | 14973414-T-C | *** | ||||||
17854677-G-A | 15742797-G-A | *** | ||||||
17988039-C-A | 15876159-C-A | P7_Prx | *** | |||||
18135740-A-T | 16023860-A-T | *** | ||||||
18228928-G-T | 16117048-G-T | *** | ||||||
18231188-A-C | 16119308-A-C | *** | ||||||
18297929-A-C | 16186049-A-C | P6_Prx | *** | |||||
18297951-A-T | 16186071-A-T | P6_Prx | *** | |||||
18298017-C-T | 16186137-C-T | P6_Prx | *** | |||||
18329261-C-T | 16217381-C-T | P6_Prx | *** | |||||
18443978-G-T | 16332098-G-T | P6_Dst | *** | |||||
18540940-A-C | 16429060-A-C | *** | ||||||
18734309-G-A | 16622429-G-A | *** | ||||||
18761920-G-A | 16650040-G-A | *** | ||||||
18846334-C-T | 16734454-C-T | *** | ||||||
19014536-C-T | 16902656-C-T | *** | ||||||
19083771-G-A | 16971891-G-A | *** | ||||||
19085596-T-C | 16973716-T-C | *** | ||||||
19098834-C-A | 16986954-C-A | *** | ||||||
19178198-G-T | 17066318-G-T | *** | ||||||
19187481-G-T | 17075601-G-T | *** | ||||||
19297659-G-T | 17185779-G-T | *** | ||||||
19330088-T-G | 17218208-T-G | *** | ||||||
19330089-G-A | 17218209-G-A | *** | ||||||
19330164-C-T | 17218284-C-T | *** | ||||||
19426856-A-T | 17314976-A-T | *** | ||||||
19757253-T-G | 17645373-T-G | P5_Prx | *** | |||||
19775476-C-T | 17663596-C-T | P5_Prx | *** | |||||
19775485-C-T | 17663605-C-T | P5_Prx | *** | |||||
19792043-G-T | 17680163-G-T | P5_Prx | *** | |||||
19799261-T-A | 17687381-T-A | P5_Prx | *** | |||||
19828171-G-A | 17716291-G-A | P5_Prx | *** | |||||
19853624-G-T | 17741744-G-T | P5_Prx | *** | |||||
19853700-G-T | 17741820-G-T | P5_Prx | *** | |||||
19967620-G-T | 17855740-G-T | P5_Prx | *** | |||||
19987870-C-A | 17875990-C-A | P5_Prx | *** | |||||
20084344-C-T | 17972464-C-T | P5_Dst | *** | |||||
20084637-A-T | 17972757-A-T | P5_Dst | *** | |||||
20084661-C-T | 17972781-C-T | P5_Dst | *** | |||||
20084717-G-T | 17972837-G-T | P5_Dst | *** | |||||
20084777-A-T | 17972897-A-T | P5_Dst | *** | |||||
20084799-C-T | 17972919-C-T | P5_Dst | *** | |||||
20084803-G-T | 17972923-G-T | P5_Dst | *** | |||||
20084855-G-T | 17972975-G-T | P5_Dst | *** | |||||
20084859-A-T | 17972979-A-T | P5_Dst | *** | |||||
20084870-A-T | 17972990-A-T | P5_Dst | *** | |||||
20084922-C-T | 17973042-C-T | P5_Dst | *** | |||||
20101599-C-A | 17989719-C-A | P5_Dst | *** | |||||
20101851-A-G | 17989971-A-G | P5_Dst | *** | |||||
20105156-C-A | 17993276-C-A | P5_Dst | *** | |||||
20243382-A-G | 18081496-A-G | P5_Dst | *** | |||||
20252488-C-T | 18090602-C-T | P5_Dst | *** | |||||
20252646-C-A | 18090760-C-A | P5_Dst | *** | |||||
20252697-C-A | 18090811-C-A | P5_Dst | *** | |||||
20252729-G-A | 18090843-G-A | P5_Dst | *** | |||||
20252739-T-A | 18090853-T-A | P5_Dst | *** | |||||
20252786-C-A | 18090900-C-A | P5_Dst | *** | |||||
20329784-C-T | 18167898-C-T | P5_Dst | *** | |||||
20331818-T-A | 18169932-T-A | P5_Dst | *** | |||||
20335654-A-G | 18173768-A-G | P5_Dst | *** | |||||
20350592-G-T | 18188706-G-T | P5_Dst | *** | |||||
20359132-A-C | 18197246-A-C | P5_Dst | *** | |||||
20453594-A-T | 18291708-A-T | P5_Dst | *** | |||||
20568364-C-A | 18406478-C-A | P5_Dst | *** | |||||
20568724-A-T | 18406838-A-T | P5_Dst | *** | |||||
20570038-C-T | 18408152-C-T | P5_Dst | *** | |||||
20574024-G-T | 18412138-G-T | P5_Dst | *** | |||||
20663594-A-G | 18501708-A-G | P4_Prx | *** | |||||
20907427-G-T | 18745541-G-T | P4_Dst | *** | |||||
20907973-C-A | 18746087-C-A | P4_Dst | *** | |||||
20967437-C-A | 18805551-C-A | P4_Dst | *** | |||||
20970174-T-C | 18808288-T-C | P4_Dst | *** | |||||
21056492-T-C | 18894606-T-C | *** | ||||||
21171585-G-C | 19009699-G-C | *** | ||||||
21511750-A-C | 19349864-A-C | *** | ||||||
21535738-C-A | 19373852-C-A | *** | ||||||
21630225-C-T | 19468339-C-T | *** | ||||||
21914187-T-A | 19752301-T-A | *** | ||||||
21914207-C-A | 19752321-C-A | *** | ||||||
21914214-A-G | 19752328-A-G | *** | ||||||
21929678-G-T | 19767792-G-T | *** | ||||||
21997014-C-A | 19835128-C-A | *** | ||||||
22235008-T-A | 20073122-T-A | DYZ19 | *** | |||||
22258028-G-T | 20096142-G-T | BY214545 | DYZ19 | *** | ||||
22283212-T-A | 20121326-T-A | DYZ19 | *** | |||||
22283213-A-G | 20121327-A-G | DYZ19 | *** | |||||
22283221-T-C | 20121335-T-C | DYZ19 | *** | |||||
22283232-A-G | 20121346-A-G | DYZ19 | *** | |||||
22283234-A-T | 20121348-A-T | DYZ19 | *** | |||||
22283238-G-T | 20121352-G-T | DYZ19 | *** | |||||
22311209-C-T | 20149323-C-T | DYZ19 | *** | |||||
22320858-T-G | 20158972-T-G | FGC44708 | DYZ19 | *** | ||||
22330239-T-C | 20168353-T-C | DYZ19 | *** | |||||
22332948-A-T | 20171062-A-T | DYZ19 | *** | |||||
22338697-T-G | 20176811-T-G | DYZ19 | *** | |||||
22341292-G-A | 20179406-G-A | DYZ19 | *** | |||||
22346841-T-A | 20184955-T-A | DYZ19 | *** | |||||
22346904-C-G | 20185018-C-G | DYZ19 | *** | |||||
22354151-C-T | 20192265-C-T | DYZ19 | *** | |||||
22356684-T-G | 20194798-T-G | DYZ19 | *** | |||||
22358194-A-T | 20196308-A-T | DYZ19 | *** | |||||
22358359-C-G | 20196473-C-G | DYZ19 | *** | |||||
22360321-A-T | 20198435-A-T | DYZ19 | *** | |||||
22360322-G-T | 20198436-G-T | DYZ19 | *** | |||||
22366045-T-C | 20204159-T-C | DYZ19 | *** | |||||
22366076-A-G | 20204190-A-G | DYZ19 | *** | |||||
22422068-A-G | 20260182-A-G | DYZ19 | *** | |||||
22422085-G-C | 20260199-G-C | DYZ19 | *** | |||||
22422099-G-T | 20260213-G-T | DYZ19 | *** | |||||
22422122-A-C | 20260236-A-C | DYZ19 | *** | |||||
22457265-C-G | 20295379-C-G | DYZ19 | *** | |||||
22482929-T-G | 20321043-T-G | DYZ19 | *** | |||||
22482931-C-G | 20321045-C-G | DYZ19 | *** | |||||
22499902-T-C | 20338016-T-C | DYZ19 | *** | |||||
22503000-G-T | 20341114-G-T | DYZ19 | *** | |||||
22503509-G-A | 20341623-G-A | DYZ19 | *** | |||||
22504660-A-C | 20342774-A-C | DYZ19 | *** | |||||
22505136-G-A | 20343250-G-A | DYZ19 | *** | |||||
22505153-T-A | 20343267-T-A | DYZ19 | *** | |||||
22505154-T-C | 20343268-T-C | DYZ19 | *** | |||||
22505177-T-A | 20343291-T-A | DYZ19 | *** | |||||
22505179-T-G | 20343293-T-G | DYZ19 | *** | |||||
22593516-C-A | 20431630-C-A | *** | ||||||
22619970-C-G | 20458084-C-G | *** | ||||||
22642647-A-G | 20480761-A-G | *** | ||||||
22779187-G-A | 20617301-G-A | *** | ||||||
23006490-A-G | 20844604-A-G | *** | ||||||
23100208-T-A | 20938322-T-A | *** | ||||||
23180773-C-A | 21018887-C-A | *** | ||||||
23181434-C-A | 21019548-C-A | *** | ||||||
23228497-G-T | 21066611-G-T | *** | ||||||
23261146-G-T | 21099260-G-T | *** | ||||||
23448397-C-A | 21286511-C-A | *** | ||||||
23520981-C-A | 21359095-C-A | *** | ||||||
23808216-C-A | 21646330-C-A | *** | ||||||
24043630-T-C | 21897483-T-C | *** | ||||||
24051030-G-T | 21904883-G-T | P3_b1 | *** | |||||
24126088-T-G | 21979941-T-G | P3_b1 | *** | |||||
24133348-C-A | 21987201-C-A | P3_b1 | *** | |||||
24211289-A-C | 22065142-A-C | P3_b1 | *** | |||||
24231637-C-A | 22085490-C-A | P3_b1 | *** | |||||
24231962-T-C | 22085815-T-C | P3_b1 | *** | |||||
24257514-G-A | 22111367-G-A | P3_b1 | *** | |||||
24264970-A-T | 22118823-A-T | P3_b1 | *** | |||||
24264981-G-T | 22118834-G-T | P3_b1 | *** | |||||
24290840-T-A | 22144693-T-A | P3_t1 | *** | |||||
24387113-C-A | 22240966-C-A | *** | ||||||
24573678-C-A | 22427531-C-A | P3_t2 | *** | |||||
24605217-C-T | 22459070-C-T | P3_t2 | *** | |||||
24646654-A-G | 22500507-A-G | P3_b2 | *** | |||||
24673700-T-A | 22527553-T-A | P3_b2 | *** | |||||
24763542-T-C | 22617395-T-C | P3_b2 | *** | |||||
24771059-G-A | 22624912-G-A | P3_b2 | *** | |||||
24771141-G-T | 22624994-G-T | P3_b2 | *** | |||||
24771148-G-T | 22625001-G-T | P3_b2 | *** | |||||
24862194-T-G | 22716047-T-G | IR1_R | *** | |||||
24914311-T-A | 22768164-T-A | g1 | *** | |||||
24997292-T-C | 22851145-T-C | g1 | *** | |||||
25012695-G-T | 22866548-G-T | g1 | *** | |||||
25058884-T-A | 22912737-T-A | g1 | *** | |||||
25110238-A-G | 22964091-A-G | g1 | *** | |||||
25110324-C-T | 22964177-C-T | g1 | *** | |||||
25137515-C-G | 22991368-C-G | g1 | *** | |||||
25200310-C-T | 23054163-C-T | g1 | *** | |||||
25268552-G-A | 23122405-G-A | P2_r1 | *** | |||||
25268557-T-C | 23122410-T-C | P2_r1 | *** | |||||
25297656-T-A | 23151509-T-A | P2_r1 | *** | |||||
25310575-T-C | 23164428-T-C | P2_r1 | *** | |||||
25452969-G-T | 23306822-G-T | P2_r2 | *** | |||||
25508919-C-T | 23362772-C-T | P1_gr1 | *** | |||||
25510502-C-T | 23364355-C-T | P1_gr1 | *** | |||||
25511662-T-C | 23365515-T-C | P1_gr1 | *** | |||||
25520132-T-G | 23373985-T-G | P1_gr1 | *** | |||||
25545852-T-C | 23399705-T-C | P1_gr1 | *** | |||||
25617849-T-A | 23471702-T-A | P1_gr1 | *** | |||||
25626249-A-C | 23480102-A-C | P1_b3 | *** | |||||
25626282-A-T | 23480135-A-T | P1_b3 | *** | |||||
25825701-T-C | 23679554-T-C | P1_b3 | *** | |||||
25825946-C-A | 23679799-C-A | P1_b3 | *** | |||||
25825964-C-A | 23679817-C-A | P1_b3 | *** | |||||
25825973-C-A | 23679826-C-A | P1_b3 | *** | |||||
25902150-T-G | 23756003-T-G | P1_Y1 | *** | |||||
25930342-C-A | 23784195-C-A | P1_Y1 | *** | |||||
25973802-C-A | 23827655-C-A | P1_Y1 | *** | |||||
25973816-A-T | 23827669-A-T | P1_Y1 | *** | |||||
26022127-A-C | 23875980-A-C | P1_Y1 | *** | |||||
26047573-G-T | 23901426-G-T | P1_Y1 | *** | |||||
26047591-A-T | 23901444-A-T | P1_Y1 | *** | |||||
26100553-A-G | 23954406-A-G | P1_Y1 | *** | |||||
26139555-T-C | 23993408-T-C | P1_Y1 | *** | |||||
26154758-G-T | 24008611-G-T | P1_Y1 | *** | |||||
26154792-A-G | 24008645-A-G | P1_Y1 | *** | |||||
26154817-G-T | 24008670-G-T | P1_Y1 | *** | |||||
26179165-G-C | 24033018-G-C | P1_Y1 | *** | |||||
26206333-A-G | 24060186-A-G | P1_Y1 | *** | |||||
26310742-A-T | 24164595-A-T | P1_Y1 | *** | |||||
26359455-C-A | 24213308-C-A | P1_Y1 | *** | |||||
26459274-G-T | 24313127-G-T | P1_Y1 | *** | |||||
26463585-A-T | 24317438-A-T | P1_Y1 | *** | |||||
26519742-G-T | 24373595-G-T | P1_Y1 | *** | |||||
26542907-A-G | 24396760-A-G | P1_g2 | *** | |||||
26553893-T-G | 24407746-T-G | P1_g2 | *** | |||||
26616810-A-T | 24470663-A-T | P1_g2 | *** | |||||
26658724-G-T | 24512577-G-T | P1_g2 | *** | |||||
26713740-C-T | 24567593-C-T | P1_g2 | *** | |||||
26748979-A-T | 24602832-A-T | P1_g2 | *** | |||||
26810625-G-T | 24664478-G-T | P1_g2 | *** | |||||
26810657-A-G | 24664510-A-G | P1_g2 | *** | |||||
26810706-A-G | 24664559-A-G | P1_g2 | *** | |||||
26890370-T-G | 24744223-T-G | P1_r3 | *** | |||||
26902256-C-A | 24756109-C-A | P1_r3 | *** | |||||
26902281-C-A | 24756134-C-A | P1_r3 | *** | |||||
26906655-A-C | 24760508-A-C | P1_r3 | *** | |||||
26908043-G-A | 24761896-G-A | P1_r3 | *** | |||||
26980527-A-G | 24834380-A-G | P1_r4 | *** | |||||
26981438-T-C | 24835291-T-C | P1_r4 | *** | |||||
27151372-G-T | 25005225-G-T | P1_g3 | *** | |||||
27162822-C-T | 25016675-C-T | P1_g3 | *** | |||||
27185997-G-T | 25039850-G-T | P1_g3 | *** | |||||
27203969-G-T | 25057822-G-T | P1_g3 | *** | |||||
27214278-A-T | 25068131-A-T | P1_g3 | *** | |||||
27228679-G-A | 25082532-G-A | P1_g3 | *** | |||||
27231232-T-C | 25085085-T-C | P1_g3 | *** | |||||
27234606-C-A | 25088459-C-A | P1_g3 | *** | |||||
27248289-C-T | 25102142-C-T | P1_g3 | *** | |||||
27317761-C-T | 25171614-C-T | P1_g3 | *** | |||||
27346362-G-A | 25200215-G-A | P1_g3 | *** | |||||
27353074-A-C | 25206927-A-C | P1_g3 | *** | |||||
27526850-A-C | 25380703-A-C | P1_Y2 | *** | |||||
27562722-C-G | 25416575-C-G | P1_Y2 | *** | |||||
27576876-C-T | 25430729-C-T | P1_Y2 | *** | |||||
27586134-G-T | 25439987-G-T | P1_Y2 | *** | |||||
27586182-G-T | 25440035-G-T | P1_Y2 | *** | |||||
27641006-T-C | 25494859-T-C | P1_Y2 | *** | |||||
27663532-G-T | 25517385-G-T | P1_Y2 | *** | |||||
27676812-T-C | 25530665-T-C | P1_Y2 | *** | |||||
27692663-A-T | 25546516-A-T | P1_Y2 | *** | |||||
27758128-T-C | 25611981-T-C | P1_Y2 | *** | |||||
27809198-G-A | 25663051-G-A | P1_Y2 | *** | |||||
27810760-T-G | 25664613-T-G | P1_Y2 | *** | |||||
27834485-C-A | 25688338-C-A | P1_Y2 | *** | |||||
27841013-G-A | 25694866-G-A | P1_Y2 | *** | |||||
27841567-C-T | 25695420-C-T | P1_Y2 | *** | |||||
27861869-G-T | 25715722-G-T | P1_Y2 | *** | |||||
27883941-G-T | 25737794-G-T | P1_Y2 | *** | |||||
27915781-C-A | 25769634-C-A | P1_Y2 | *** | |||||
27935160-A-T | 25789013-A-T | P1_Y2 | *** | |||||
28019930-G-A | 25873783-G-A | P1_Y2 | *** | |||||
28076602-T-C | 25930455-T-C | P1_Y2 | *** | |||||
28076608-C-T | 25930461-C-T | P1_Y2 | *** | |||||
28118503-G-A | 25972356-G-A | P1_b4 | *** | |||||
28120115-A-T | 25973968-A-T | P1_b4 | *** | |||||
28155091-T-C | 26008944-T-C | P1_b4 | *** | |||||
28168786-G-A | 26022639-G-A | P1_b4 | *** | |||||
28190648-A-G | 26044501-A-G | P1_b4 | *** | |||||
28191811-C-A | 26045664-C-A | P1_b4 | *** | |||||
28253372-G-A | 26107225-G-A | P1_b4 | *** | |||||
28261782-A-G | 26115635-A-G | P1_b4 | *** | |||||
28301497-C-A | 26155350-C-A | P1_b4 | *** | |||||
28417144-G-A | 26270997-G-A | P1_gr2 | *** | |||||
28438244-G-T | 26292097-G-T | P1_gr2 | *** | |||||
28491691-T-C | 26345544-T-C | *** | ||||||
28549491-G-A | 26403344-G-A | *** | ||||||
28665775-T-A | 26519628-T-A | *** | ||||||
58819474-A-G | 56771397-T-C | *** | ||||||
58820159-G-T | 56770712-C-A | *** | ||||||
58823407-A-C | 56767464-T-G | *** | ||||||
58823500-A-T | 56767371-T-A | *** | ||||||
58824926-A-T | 56765945-T-A | *** | ||||||
58830308-C-G | 56760563-G-C | *** | ||||||
58833208-G-C | 56757663-C-G | *** | ||||||
58840760-C-G | 56750111-G-C | *** | ||||||
58840770-C-A | 56750101-G-T | *** | ||||||
58840778-T-C | 56750093-A-G | *** | ||||||
58842016-T-C | 56748855-A-G | *** | ||||||
58842075-A-C | 56748796-T-G | *** | ||||||
58844658-C-T | 56746213-G-A | *** | ||||||
58844676-C-T | 56746195-G-A | *** | ||||||
58846400-C-T | 56744471-G-A | *** | ||||||
58855318-C-A | 56735553-G-T | *** | ||||||
58855320-T-C | 56735551-A-G | *** | ||||||
58855340-T-C | 56735531-A-G | *** | ||||||
58859644-T-A | 56731227-A-T | *** | ||||||
58861745-A-C | 56729126-T-G | *** | ||||||
58862532-T-A | 56728339-A-T | *** | ||||||
58862549-G-T | 56728322-C-A | *** | ||||||
58863129-A-T | 56727742-T-A | *** | ||||||
58863881-C-T | 56726990-G-A | *** | ||||||
58865458-G-T | 56725413-C-A | *** | ||||||
58867146-G-T | 56723725-C-A | *** | ||||||
58876802-T-A | 56714069-A-T | *** | ||||||
58887653-A-G | 56703218-T-C | *** | ||||||
58890644-T-A | 56700227-A-T | *** | ||||||
58892829-T-G | 56698042-A-C | *** | ||||||
58899218-G-A | 56691653-C-T | *** | ||||||
58899798-G-C | 56691073-C-G | *** | ||||||
58901239-T-G | 56689632-A-C | *** | ||||||
58907099-C-T | 56683772-G-A | *** | ||||||
58999124-T-C | 56852977-T-C | *** | ||||||
13471860-TT-CTC | 11316184-TT-CTC | *** | ||||||
22287292-CA-AT | 20125406-CA-AT | DYZ19 | *** | |||||
13535681-A-ATG | 11380005-A-ATG | 9×TG | *** | |||||
5387429-TC-T | 5519388-TC-T | *** | ||||||
13459496-TTC-ATT | 11303820-TTC-ATT | *** | ||||||
28747702-TTCA-T | 26601555-TTCA-T | *** | ||||||
3131168-A-AGATT | 3263127-A-AGATT | *** | ||||||
3550573-TCA-CC | 3682532-TCA-CC | *** | ||||||
3930563-GTATATATATA-G | 4062522-GTATATATATA-G | 21×TA | *** | |||||
5415304-A-ATCTG | 5547263-A-ATCTG | *** | ||||||
6226034-TTCTTTCTA-T | 6357993-TTCTTTCTA-T | IR3_Dst | *** | |||||
7336698-G-GATAGATAGATAT | 7468657-G-GATAGATAGATAT | *** | ||||||
7573143-TC-T | 7705102-TC-T | *** | ||||||
7907526-G-GA | 8039485-G-GA | *** | ||||||
8125032-G-GAAAA | 8256991-G-GAAAA | *** | ||||||
8125040-G-GAAAA | 8256999-G-GAAAA | *** | ||||||
8125070-A-AGAAGG | 8257029-A-AGAAGG | *** | ||||||
8498338-CAAAAA-C | 8630297-CAAAAA-C | 16×A | *** | |||||
10041433-A-AGT | 10203824-A-AGT | *** | ||||||
13445360-GACAAAA-G | 11289684-GACAAAA-G | *** | ||||||
13461062-GTAGG-ATAGA | 11305386-GTAGG-ATAGA | *** | ||||||
13470520-TGG-CGA | 11314844-TGG-CGA | *** | ||||||
13470544-CA-TG | 11314868-CA-TG | *** | ||||||
13470557-CCAGTGTCCATC-ATTGAGTGCGTG | 11314881-CCAGTGTCCATC-ATTGAGTGCGTG | *** | ||||||
13470587-GC-AA | 11314911-GC-AA | *** | ||||||
13470594-GCG-ACA | 11314918-GCG-ACA | *** | ||||||
13470626-AC-CG | 11314950-AC-CG | *** | ||||||
13488186-GCCCAGA-TCCAAGG | 11332510-GCCCAGA-TCCAAGG | *** | ||||||
13488311-CCG-ACA | 11332635-CCG-ACA | *** | ||||||
13488324-CGCCC-TACCG | 11332648-CGCCC-TACCG | *** | ||||||
13488362-CAGGCATC-AAGACATT | 11332686-CAGGCATC-AAGACATT | *** | ||||||
13489202-CCTTCG-TGTAAT | 11333526-CCTTCG-TGTAAT | *** | ||||||
13489233-CT-AC | 11333557-CT-AC | *** | ||||||
13489635-AC-CA | 11333959-AC-CA | *** | ||||||
13740728-A-AAATGG | 11585052-A-AAATGG | *** | ||||||
13838169-A-ATGGAC | 11717463-A-ATGGAC | *** | ||||||
13936206-A-AAGAC | 11815500-A-AAGAC | *** | ||||||
14866143-G-GTTTT | 12754213-G-GTTTT | *** | ||||||
14937863-C-CTTTTCTTTTA | 12825938-C-CTTTTCTTTTA | *** | ||||||
14981859-TTCCTTCCT-A | 12869927-TTCCTTCCT-A | *** | ||||||
15047300-T-TC | 12935391-T-TC | *** | ||||||
16464533-TC-T | 14352653-TC-T | *** | ||||||
16809479-A-AGATT | 14697599-A-AGATT | *** | ||||||
17275764-A-AAGGGG | 15163884-A-AAGGGG | *** | ||||||
17275765-A-AGGGAG | 15163885-A-AGGGAG | *** | ||||||
17275777-G-GGAAGT | 15163897-G-GGAAGT | *** | ||||||
17700080-CTCTTGT-TTCTCAC | 15588200-CTCTTGT-TTCTCAC | *** | ||||||
18190399-GA-AT | 16078519-GA-AT | *** | ||||||
18393234-A-ATCTT | 16281354-A-ATCTT | P6_Gap | *** | |||||
19346482-C-CTTTCTTTA | 17234602-C-CTTTCTTTA | *** | ||||||
19372323-T-TAGAC | 17260443-T-TAGAC | *** | ||||||
19412012-G-GAAAA | 17300132-G-GAAAA | *** | ||||||
19425267-TCA-AGT | 17313387-TCA-AGT | *** | ||||||
19425280-CA-GG | 17313400-CA-GG | *** | ||||||
21251811-C-CA | 19089925-C-CA | *** | ||||||
22287259-CTTC-GTTT | 20125373-CTTC-GTTT | DYZ19 | *** | |||||
22297109-GA-CC | 20135223-GA-CC | DYZ19 | *** | |||||
22330231-TGGA-CGGC | 20168345-TGGA-CGGC | DYZ19 | *** | |||||
22330277-TTGGT-CTTAC | 20168391-TTGGT-CTTAC | DYZ19 | *** | |||||
22341304-ACCGGTGA-TACGGAGG | 20179418-ACCGGTGA-TACGGAGG | DYZ19 | *** | |||||
22341364-CCAGG-ACAGA | 20179478-CCAGG-ACAGA | DYZ19 | *** | |||||
22346873-GG-AA | 20184987-GG-AA | DYZ19 | *** | |||||
22346882-AGTCTGGCA-CTTCGGGCC | 20184996-AGTCTGGCA-CTTCGGGCC | DYZ19 | *** | |||||
22422085-GGGTG-CGGTA | 20260199-GGGTG-CGGTA | DYZ19 | *** | |||||
22435708-GCAG-ACAA | 20273822-GCAG-ACAA | DYZ19 | *** | |||||
22503526-CT-AC | 20341640-CT-AC | DYZ19 | *** | |||||
22503610-GTGTT-CTGTC | 20341724-GTGTT-CTGTC | DYZ19 | *** | |||||
22996969-G-GATATATAT | 20835083-G-GATATATAT | 21×AT | *** | |||||
24264990-GG-CT | 22118843-GG-CT | P3_b1 | *** | |||||
24425341-A-ATACT | 22279194-A-ATACT | *** | ||||||
24447129-A-AAGAG | 22300982-A-AAGAG | *** | ||||||
25323011-CTTTT-C | 23176864-CTTTT-C | P2_r1 | 30×T | *** | ||||
25995484-ACAGGAG-A | 23849337-ACAGGAG-A | P1_Y1 | *** | |||||
26138361-CA-C | 23992214-CA-C | P1_Y1 | 10×A | *** | ||||
26344249-CAAA-C | 24198102-CAAA-C | P1_Y1 | 14×A | *** | ||||
26810646-GCCCA-CCCCG | 24664499-GCCCA-CCCCG | P1_g2 | *** | |||||
28225579-GTTGT-TTTG | 26079432-GTTGT-TTTG | P1_b4 | *** | |||||
58846313-AG-A | 56744555-TC-T | *** | ||||||
58855315-TTCCAT-CTGCTCTCAAC | 56735551-ATGGAA-GTTGAGAGCAG | *** | ||||||
58858901-CCATTCCATTCCATTG-C | 56731937-GTGCAATGGAATGGAA-G | *** | ||||||
58874750-CTTC-TTTG | 56716118-GAAG-CAAA | *** | ||||||
58912874-ATTCG-TTTCT | 56677993-CGAAT-AGAAA | *** | ||||||
58974185-TG-CC | 56828038-TG-CC | *** | ||||||
58979990-C-TCCATCCCACT | 56833843-C-TCCATCCCACT | 4×CCACT | *** | |||||
59008780-TTTA-T | 56862633-TTTA-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.