Baker
FTDNA: B20183, BigY3: B20183, BigY2: B20183, YFull-BigY: YF05853Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA B20183 | BigY3 B20183 | BigY2 B20183 |
---|---|---|---|---|---|---|---|---|---|---|
5989040-A-AT | 6120999-A-AT | 12×T | A* | |||||||
13451271-C-T | 11295595-C-T | A* | A* | |||||||
56836282-C-T | A* | |||||||||
25508327-C-CA | 23362180-C-CA | P1_gr1 | 17×A | A* | ||||||
20325028-A-ATT | 18163142-A-ATT | P5_Dst | A* | |||||||
20325038-G-C | 18163152-G-C | P5_Dst | A* | |||||||
13448369-C-A | 11292693-C-A | A* | ||||||||
13449616-C-T | 11293940-C-T | A* | ||||||||
20503616-C-G | 18341730-C-G | P5_Dst | A* | |||||||
20512428-G-C | 18350542-G-C | P5_Dst | A* | |||||||
22445941-C-G | 20284055-C-G | BY46850 | DYZ19 | *** | + | |||||
14673-G-A | + | |||||||||
16646648-CGTGTGTGTGT-C | 14534768-CGTGTGTGTGT-C | 19×GT | *** | *** | * | |||||
20231508-CAAGA-C | 18069622-CAAGA-C | P5_Dst | 21×AAGA | ** | ||||||
13483115-A-G | 11327439-A-G | ** | ||||||||
7139178-TACAC-T | 7271137-TACAC-T | 12×AC | ** | |||||||
3270977-T-C | 3402936-T-C | ** | ||||||||
16601556-C-G | 14489676-C-G | ** | ||||||||
13324762-T-C | 11169086-T-C | ** | ||||||||
4113108-C-A | 4245067-C-A | FGC66276 | ** | |||||||
18325701-ATTT-A | 16213821-ATTT-A | P6_Prx | 27×T | ** | ||||||
20438758-ATTT-A | 18276872-ATTT-A | P5_Dst | 23×T | ** | ||||||
4251033-C-CT | 4382992-C-CT | 24×T | ** | |||||||
28808558-C-A | 26662411-C-A | ** | ||||||||
27546761-TG-T | 25400614-TG-T | P1_Y2 | ** | |||||||
10682642-G-C | ** | |||||||||
10682649-G-C | ** | |||||||||
8279833-GT-G | 8411792-GT-G | 8×T | ** | |||||||
5524064-C-A | 5656023-C-A | ** | ||||||||
10672501-T-C | ** | |||||||||
6692768-T-G | 6824727-T-G | ** | ||||||||
11677002-G-T | ** | |||||||||
8085376-C-A | 8217335-C-A | ** | ||||||||
23181450-AT-A | 21019564-AT-A | ** | ||||||||
20579140-G-GTA | 18417254-G-GTA | P5_Dst | ** | |||||||
2909074-C-A | 3041033-C-A | ** | ||||||||
13236298-T-G | 11080622-T-G | ** | ||||||||
21495330-C-A | 19333444-C-A | 13×A | ** | |||||||
11001361-T-C | ** | |||||||||
27447465-T-TGA | 25301318-T-TGA | P1_Y2 | ** | |||||||
10667696-T-A | ** | |||||||||
10667708-A-G | ** | |||||||||
10667726-G-T | ** | |||||||||
6403534-A-G | 6535493-A-G | ** | ||||||||
10760465-A-T | ** | |||||||||
10760470-T-A | ** | |||||||||
10760471-A-T | ** | |||||||||
10760474-T-C | ** | |||||||||
13303421-C-A | 11147745-C-A | ** | ||||||||
22011938-C-A | 19850052-C-A | FTB1185 | ** | |||||||
2745876-GAA-G | 2877835-GAA-G | 14×A | ** | |||||||
11001356-A-C | ** | |||||||||
11025160-G-C | ** | |||||||||
10951262-C-A | ** | |||||||||
10986625-C-A | ** | |||||||||
7437435-C-A | 7569394-C-A | ** | ||||||||
10760459-A-G | ** | |||||||||
9221715-ACC-A | 9384106-ACC-A | ** | ||||||||
15971225-CTTTT-C | 13859345-CTTTT-C | 18×T | ** | |||||||
10756171-G-C | ** | |||||||||
10805239-G-T | ** | |||||||||
21352434-C-A | 19190548-C-A | ** | ||||||||
28484326-C-A | 26338179-C-A | ** | ||||||||
17876361-C-A | 15764481-C-A | ** | ||||||||
4316852-G-GA | 4448811-G-GA | 10×A | ** | |||||||
10793597-C-A | ** | |||||||||
16930055-C-A | 14818175-C-A | ** | ||||||||
15449962-C-A | 13338082-C-A | ** | ||||||||
10989853-C-A | ** | |||||||||
5426431-A-T | 5558390-A-T | ** | ||||||||
15732194-C-A | 13620314-C-A | ** | ||||||||
15429439-C-A | 13317559-C-A | ** | ||||||||
10687275-C-A | ** | |||||||||
14948920-C-A | 12836994-C-A | ** | ||||||||
7238263-C-CTT | 7370222-C-CTT | 14×T | ** | |||||||
21858241-C-A | 19696355-C-A | ** | ||||||||
10766735-T-C | ** | |||||||||
7053757-C-A | 7185716-C-A | ** | ||||||||
5851185-C-A | 5983144-C-A | ** | ||||||||
17301238-CAAAAAAA-C | 15189358-CAAAAAAA-C | 23×A | ** | |||||||
14099899-C-A | 11979193-C-A | ** | ||||||||
21708295-C-A | 19546409-C-A | ** | ||||||||
6277759-C-T | 6409718-C-T | IR3_Dst | ** | |||||||
22619325-A-C | 20457439-A-C | ** | ||||||||
10791156-C-A | FT431341 | ** | ||||||||
10921063-C-T | ** | |||||||||
16601474-G-A | 14489594-G-A | ** | ||||||||
7717824-G-T | 7849783-G-T | ** | ||||||||
26073031-A-T | 23926884-A-T | P1_Y1 | ** | |||||||
16601494-G-A | 14489614-G-A | ** | ||||||||
5393350-C-A | 5525309-C-A | ** | ||||||||
4230604-T-C | 4362563-T-C | ** | ||||||||
2860150-C-A | 2992109-C-A | ** | ||||||||
10884391-C-A | ** | |||||||||
19464041-G-T | 17352161-G-T | ** | ||||||||
9768843-T-A | 9931234-T-A | ** | ||||||||
7385855-C-A | 7517814-C-A | ** | ||||||||
10898458-C-A | ** | |||||||||
6092194-C-A | 6224153-C-A | ** | ||||||||
16738083-C-A | 14626203-C-A | ** | ||||||||
14017655-C-A | 11896949-C-A | ** | ||||||||
9502540-G-A | 9664931-G-A | ** | ||||||||
10863080-TCATTC-T | ** | |||||||||
10654657-G-T | ** | |||||||||
9416754-TG-T | 9579145-TG-T | ** | ||||||||
10883100-T-C | ** | |||||||||
4240860-C-A | 4372819-C-A | ** | ||||||||
10864718-C-A | ** | |||||||||
16601526-G-A | 14489646-G-A | ** | ||||||||
14493542-C-A | 12381739-C-A | ** | ||||||||
18928836-C-A | 16816956-C-A | ** | ||||||||
21381997-A-T | 19220111-A-T | ** | ||||||||
7664407-C-A | 7796366-C-A | ** | ||||||||
13457922-A-T | 11302246-A-T | ** | ||||||||
13722736-T-C | 11567060-T-C | ** | ||||||||
7783081-C-A | 7915040-C-A | ** | ||||||||
7401165-C-A | 7533124-C-A | ** | ||||||||
17375038-G-T | 15263158-G-T | ** | ||||||||
5358635-C-A | 5490594-C-A | ** | ||||||||
23181444-C-A | 21019558-C-A | ** | ||||||||
10914354-G-T | ** | |||||||||
16220938-C-A | 14109058-C-A | ** | ||||||||
10660696-G-T | ** | |||||||||
21836586-C-A | 19674700-C-A | ** | ||||||||
10865504-C-T | ** | |||||||||
11019048-C-A | ** | |||||||||
27447499-TGAGA-T | 25301352-TGAGA-T | P1_Y2 | 10×GA | ** | ||||||
2900340-C-A | 3032299-C-A | ** | ||||||||
2944156-C-A | 3076115-C-A | ** | ||||||||
2945774-C-A | 3077733-C-A | ** | ||||||||
2953526-G-T | 3085485-G-T | ** | ||||||||
2985132-TA-T | 3117091-TA-T | ** | ||||||||
3052131-A-G | 3184090-A-G | ** | ||||||||
3053001-A-C | 3184960-A-C | ** | ||||||||
3093154-T-A | 3225113-T-A | ** | ||||||||
3103509-G-T | 3235468-G-T | ** | ||||||||
3122280-A-G | 3254239-A-G | ** | ||||||||
3165817-G-T | 3297776-G-T | ** | ||||||||
3209485-C-A | 3341444-C-A | ** | ||||||||
3258764-C-A | 3390723-C-A | ** | ||||||||
3403982-G-T | 3535941-G-T | ** | ||||||||
3404421-G-T | 3536380-G-T | ** | ||||||||
3600716-C-A | 3732675-C-A | ** | ||||||||
3607269-G-T | 3739228-G-T | ** | ||||||||
3909895-T-C | 4041854-T-C | ** | ||||||||
3986602-T-A | 4118561-T-A | ** | ||||||||
4070953-C-A | 4202912-C-A | ** | ||||||||
4095605-G-A | 4227564-G-A | ** | ||||||||
4104895-T-C | 4236854-T-C | ** | ||||||||
4133335-C-A | 4265294-C-A | ** | ||||||||
4165377-T-C | 4297336-T-C | ** | ||||||||
4165390-A-G | 4297349-A-G | ** | ||||||||
4178864-T-A | 4310823-T-A | ** | ||||||||
4187151-G-A | 4319110-G-A | ** | ||||||||
4200576-C-A | 4332535-C-A | ** | ||||||||
4280425-G-T | 4412384-G-T | ** | ||||||||
4302590-T-G | 4434549-T-G | ** | ||||||||
4389515-A-G | 4521474-A-G | ** | ||||||||
4392307-A-C | 4524266-A-C | ** | ||||||||
4408881-G-A | 4540840-G-A | ** | ||||||||
4454294-G-T | 4586253-G-T | ** | ||||||||
4472391-C-A | 4604350-C-A | ** | ||||||||
4506932-C-A | 4638891-C-A | ** | ||||||||
4510019-T-C | 4641978-T-C | ** | ||||||||
4540069-A-T | 4672028-A-T | ** | ||||||||
4591910-C-A | 4723869-C-A | ** | ||||||||
4683305-A-G | 4815264-A-G | ** | ||||||||
4701392-G-A | 4833351-G-A | ** | ||||||||
4770604-G-T | 4902563-G-T | ** | ||||||||
4792550-C-A | 4924509-C-A | ** | ||||||||
4863442-T-A | 4995401-T-A | ** | ||||||||
4897848-A-C | 5029807-A-C | FGC16558 | ** | |||||||
4897857-A-G | 5029816-A-G | ** | ||||||||
4996082-T-C | 5128041-T-C | ** | ||||||||
5000776-GA-G | 5132735-GA-G | ** | ||||||||
5071428-C-A | 5203387-C-A | ** | ||||||||
5190842-T-A | 5322801-T-A | ** | ||||||||
5216257-C-G | 5348216-C-G | ** | ||||||||
5228305-C-T | 5360264-C-T | ** | ||||||||
5267010-T-A | 5398969-T-A | ** | ||||||||
5364993-A-G | 5496952-A-G | ** | ||||||||
5501847-G-T | 5633806-G-T | ** | ||||||||
5534023-AT-A | 5665982-AT-A | ** | ||||||||
5558716-A-T | 5690675-A-T | ** | ||||||||
5567398-G-T | 5699357-G-T | ** | ||||||||
5600653-G-T | 5732612-G-T | ** | ||||||||
5634694-G-T | 5766653-G-T | ** | ||||||||
5687531-C-A | 5819490-C-A | ** | ||||||||
5777204-G-T | 5909163-G-T | ** | ||||||||
5818528-C-A | 5950487-C-A | ** | ||||||||
5854646-G-T | 5986605-G-T | ** | ||||||||
5861652-T-A | 5993611-T-A | ** | ||||||||
5887678-G-A | 6019637-G-A | ** | ||||||||
5904672-C-A | 6036631-C-A | ** | ||||||||
6355873-T-A | 6487832-T-A | ** | ||||||||
6395023-C-A | 6526982-C-A | ** | ||||||||
6444743-C-A | 6576702-C-A | ** | ||||||||
6456297-A-G | 6588256-A-G | ** | ||||||||
6466268-T-A | 6598227-T-A | ** | ||||||||
6474212-G-T | 6606171-G-T | ** | ||||||||
6489351-G-A | 6621310-G-A | ** | ||||||||
6489370-GCAAA-G | 6621329-GCAAA-G | ** | ||||||||
6523768-CT-C | 6655727-CT-C | ** | ||||||||
6606948-G-T | 6738907-G-T | ** | ||||||||
6609119-G-T | 6741078-G-T | ** | ||||||||
6690257-CT-C | 6822216-CT-C | ** | ||||||||
6692766-C-G | 6824725-C-G | ** | ||||||||
6749007-TA-T | 6880966-TA-T | ** | ||||||||
6903534-A-T | 7035493-A-T | ** | ||||||||
6911332-G-A | 7043291-G-A | ** | ||||||||
7044228-A-G | 7176187-A-G | ** | ||||||||
7062304-A-C | 7194263-A-C | Y61471 | ** | |||||||
7100494-C-A | 7232453-C-A | ** | ||||||||
7123593-C-A | 7255552-C-A | ** | ||||||||
7132685-C-A | 7264644-C-A | ** | ||||||||
7253866-C-A | 7385825-C-A | ** | ||||||||
7348707-C-A | 7480666-C-A | ** | ||||||||
7390626-A-C | 7522585-A-C | ** | ||||||||
7633153-A-G | 7765112-A-G | ** | ||||||||
7664450-C-A | 7796409-C-A | ** | ||||||||
8062689-T-C | 8194648-T-C | ** | ||||||||
8296260-C-A | 8428219-C-A | ** | ||||||||
8296524-C-A | 8428483-C-A | ** | ||||||||
8776686-G-T | 8908645-G-T | ** | ||||||||
9015494-G-T | 9177885-G-T | ** | ||||||||
9441327-T-G | 9603718-T-G | ** | ||||||||
9509676-G-T | 9672067-G-T | ** | ||||||||
9511564-G-T | 9673955-G-T | ** | ||||||||
9942308-C-A | 10104699-C-A | ** | ||||||||
10013947-G-A | 10176338-G-A | ** | ||||||||
10044138-C-A | 10206529-C-A | ** | ||||||||
10654573-C-T | FT428210 | ** | ||||||||
10659769-C-A | ** | |||||||||
10666103-T-A | ** | |||||||||
10666110-C-A | ** | |||||||||
10745320-G-T | ** | |||||||||
10745657-A-G | ** | |||||||||
10751681-CTCCAT-C | ** | |||||||||
10759318-C-A | ** | |||||||||
10767029-T-A | ** | |||||||||
10767030-C-T | ** | |||||||||
10767035-C-T | ** | |||||||||
10768976-TCCG-T | ** | |||||||||
10768982-CCA-T | ** | |||||||||
10792969-G-A | ** | |||||||||
10801220-A-G | ** | |||||||||
10814572-G-A | FT432384 | ** | ||||||||
10826720-A-T | ** | |||||||||
10849278-C-T | FT361593 | ** | ||||||||
10864544-C-A | ** | |||||||||
10872492-A-G | ** | |||||||||
10884478-A-G | ** | |||||||||
10886897-G-T | ** | |||||||||
10921067-A-G | ** | |||||||||
10921077-A-ATTCTG | ** | |||||||||
10926491-C-A | ** | |||||||||
10927946-C-A | ** | |||||||||
10937968-T-C | ** | |||||||||
10940460-C-A | ** | |||||||||
10944735-T-C | ** | |||||||||
10967752-G-T | ** | |||||||||
10985601-C-A | ** | |||||||||
10993894-A-T | ** | |||||||||
11006611-C-A | ** | |||||||||
11025830-C-A | ** | |||||||||
11026772-C-T | ** | |||||||||
11033581-C-A | ** | |||||||||
11034658-C-A | ** | |||||||||
13209406-C-T | 11053730-C-T | ** | ||||||||
13234809-T-C | 11079133-T-C | ** | ||||||||
13234846-C-A | 11079170-C-A | ** | ||||||||
13255398-C-T | 11099722-C-T | ** | ||||||||
13324875-C-A | 11169199-C-A | ** | ||||||||
13421501-C-A | 11265825-C-A | ** | ||||||||
13429667-G-T | 11273991-G-T | ** | ||||||||
13637233-C-T | 11481557-C-T | ** | ||||||||
13722638-G-A | 11566962-G-A | ** | ||||||||
13722655-G-A | 11566979-G-A | ** | ||||||||
13722761-C-T | 11567085-C-T | ** | ||||||||
11662953-G-C | ** | |||||||||
13858500-G-T | 11737794-G-T | ** | ||||||||
13897075-C-T | 11776369-C-T | ** | ||||||||
13899268-A-G | 11778562-A-G | ** | ||||||||
13929109-C-A | 11808403-C-A | ** | ||||||||
13934315-C-A | 11813609-C-A | ** | ||||||||
13945775-G-A | 11825069-G-A | ** | ||||||||
14029035-A-T | 11908329-A-T | ** | ||||||||
14046702-C-A | 11925996-C-A | ** | ||||||||
14075597-TG-T | 11954891-TG-T | ** | ||||||||
14080135-G-T | 11959429-G-T | ** | ||||||||
14100193-G-T | 11979487-G-T | ** | ||||||||
14146722-A-G | 12026016-A-G | ** | ||||||||
14174724-A-G | 12054018-A-G | ** | ||||||||
14255183-C-A | 12134477-C-A | ** | ||||||||
14313589-C-A | 12192883-C-A | ** | ||||||||
14390533-C-A | 12269829-C-A | ** | ||||||||
14470466-C-A | 12349735-C-A | ** | ||||||||
14483500-C-A | 12362769-C-A | ** | ||||||||
12373080-G-T | ** | |||||||||
14554508-G-A | 12442709-G-A | ** | ||||||||
14605457-A-T | 12493659-A-T | ** | ||||||||
14620266-C-A | 12508464-C-A | ** | ||||||||
14648679-C-A | 12536744-C-A | ** | ||||||||
14742196-C-T | 12630264-C-T | ** | ||||||||
14825898-T-C | 12713965-T-C | ** | ||||||||
15169176-G-T | 13057262-G-T | ** | ||||||||
15284071-C-A | 13172170-C-A | ** | ||||||||
15452330-C-A | 13340450-C-A | ** | ||||||||
15532418-A-G | 13420538-A-G | ** | ||||||||
15653521-G-A | 13541641-G-A | ** | ||||||||
15735467-C-A | 13623587-C-A | ** | ||||||||
15741043-C-A | 13629163-C-A | ** | ||||||||
15756501-G-A | 13644621-G-A | M3316 | ** | |||||||
15769047-GGGGCTTATTGGT-G | 13657167-GGGGCTTATTGGT-G | ** | ||||||||
15769115-G-T | 13657235-G-T | ** | ||||||||
15785979-T-A | 13674099-T-A | ** | ||||||||
15792877-C-A | 13680997-C-A | ** | ||||||||
15816530-C-A | 13704650-C-A | ** | ||||||||
15963762-C-A | 13851882-C-A | ** | ||||||||
16004010-C-A | 13892130-C-A | ** | ||||||||
16048389-C-A | 13936509-C-A | ** | ||||||||
16063554-C-T | 13951674-C-T | ** | ||||||||
16063625-C-A | 13951745-C-A | ** | ||||||||
16115541-T-C | 14003661-T-C | P8_Prx | ** | |||||||
16184180-C-A | 14072300-C-A | FTB33460 | ** | |||||||
16232326-G-A | 14120446-G-A | ** | ||||||||
16319763-C-T | 14207883-C-T | ** | ||||||||
16396212-T-A | 14284332-T-A | ** | ||||||||
16421761-A-G | 14309881-A-G | ** | ||||||||
16423564-G-T | 14311684-G-T | ** | ||||||||
16425567-T-C | 14313687-T-C | ** | ||||||||
16474720-A-G | 14362840-A-G | ** | ||||||||
16493005-C-A | 14381125-C-A | ** | ||||||||
16516407-G-C | 14404527-G-C | ** | ||||||||
16601467-G-T | 14489587-G-T | ** | ||||||||
16601469-CGG-C | 14489589-CGG-C | ** | ||||||||
16601539-T-C | 14489659-T-C | ** | ||||||||
16601540-G-A | 14489660-G-A | ** | ||||||||
16601558-G-A | 14489678-G-A | ** | ||||||||
16618458-C-A | 14506578-C-A | ** | ||||||||
16677434-C-A | 14565554-C-A | ** | ||||||||
16703758-G-T | 14591878-G-T | ** | ||||||||
16710272-C-A | 14598392-C-A | ** | ||||||||
16944564-C-A | 14832684-C-A | ** | ||||||||
17001148-T-A | 14889268-T-A | ** | ||||||||
17006556-T-G | 14894676-T-G | ** | ||||||||
17038621-C-A | 14926741-C-A | ** | ||||||||
17100489-C-A | 14988609-C-A | ** | ||||||||
17247132-G-GA | 15135252-G-GA | ** | ||||||||
17371007-G-T | 15259127-G-T | ** | ||||||||
17464928-G-T | 15353048-G-T | ** | ||||||||
17466979-A-C | 15355099-A-C | ** | ||||||||
17561573-C-A | 15449693-C-A | ** | ||||||||
17644252-C-A | 15532372-C-A | ** | ||||||||
17648411-C-A | 15536531-C-A | ** | ||||||||
17926510-C-A | 15814630-C-A | ** | ||||||||
17934195-AGTAAAATTAAAAAAAAAAAAAG-A | 15822315-AGTAAAATTAAAAAAAAAAAAAG-A | ** | ||||||||
18411350-AC-A | 16299470-AC-A | P6_Gap | ** | |||||||
18627639-C-T | 16515759-C-T | ** | ||||||||
18862043-C-G | 16750163-C-G | ** | ||||||||
18876581-G-C | 16764701-G-C | ** | ||||||||
18890469-A-G | 16778589-A-G | ** | ||||||||
18931976-A-T | 16820096-A-T | ** | ||||||||
18987114-A-C | 16875234-A-C | ** | ||||||||
19071081-C-A | 16959201-C-A | ** | ||||||||
19072193-A-T | 16960313-A-T | ** | ||||||||
19251547-C-A | 17139667-C-A | ** | ||||||||
19300247-C-A | 17188367-C-A | ** | ||||||||
19302216-A-T | 17190336-A-T | ** | ||||||||
19318176-ATCT-A | 17206296-ATCT-A | ** | ||||||||
19682368-AAAG-A | 17570488-AAAG-A | P5_Prx | ** | |||||||
20231585-A-C | 18069699-A-C | P5_Dst | ** | |||||||
20761014-A-G | 18599128-A-G | P4_Prx | ** | |||||||
21152241-T-C | 18990355-T-C | ** | ||||||||
21208843-C-A | 19046957-C-A | ** | ||||||||
21244094-T-A | 19082208-T-A | ** | ||||||||
21269425-G-A | 19107539-G-A | ** | ||||||||
21269487-C-A | 19107601-C-A | ** | ||||||||
21381847-C-A | 19219961-C-A | ** | ||||||||
21596975-C-A | 19435089-C-A | ** | ||||||||
21669068-A-G | 19507182-A-G | ** | ||||||||
21847755-G-T | 19685869-G-T | ** | ||||||||
21850874-G-T | 19688988-G-T | ** | ||||||||
22205076-C-A | 20043190-C-A | ** | ||||||||
22714346-T-C | 20552460-T-C | ** | ||||||||
22965290-A-G | 20803404-A-G | ** | ||||||||
23017875-G-T | 20855989-G-T | ** | ||||||||
23096809-A-G | 20934923-A-G | ** | ||||||||
23105759-G-T | 20943873-G-T | ** | ||||||||
23184763-C-A | 21022877-C-A | ** | ||||||||
23184768-C-A | 21022882-C-A | ** | ||||||||
23421081-T-C | 21259195-T-C | ** | ||||||||
23438853-C-A | 21276967-C-A | ** | ||||||||
23448911-C-A | 21287025-C-A | ** | ||||||||
23787745-C-T | 21625859-C-T | ** | ||||||||
24402078-A-T | 22255931-A-T | ** | ||||||||
27606992-A-G | 25460845-A-G | P1_Y2 | ** | |||||||
28475483-C-A | 26329336-C-A | ** | ||||||||
28515402-T-C | 26369255-T-C | FT279940 | ** | |||||||
28585583-G-A | 26439436-G-A | ** | ||||||||
28624043-C-A | 26477896-C-A | ** | ||||||||
28632878-T-C | 26486731-T-C | ** | ||||||||
28637532-C-A | 26491385-C-A | ** | ||||||||
28700521-G-T | 26554374-G-T | ** | ||||||||
28700543-G-C | 26554396-G-C | ** | ||||||||
56843898-T-A | ** | |||||||||
56850686-A-G | ** | |||||||||
56862464-G-T | ** | |||||||||
56873498-G-T | ** | |||||||||
13483078-C-A | 11327402-C-A | ** | ||||||||
27525243-CTTTT-C | 25379096-CTTTT-C | P1_Y2 | 27×T | ** | ||||||
5115555-A-G | 5247514-A-G | ** | ||||||||
5196615-T-C | 5328574-T-C | ** | ||||||||
8136415-G-T | 8268374-G-T | ** | ||||||||
8648177-A-ATG | 8780136-A-ATG | ** | ||||||||
10082047-T-C | 10244438-T-C | ** | ||||||||
13457446-C-CCATTG | 11301770-C-CCATTG | ** | ||||||||
13483034-A-T | 11327358-A-T | ** | ||||||||
13483040-T-G | 11327364-T-G | ** | ||||||||
13483058-C-A | 11327382-C-A | ** | ||||||||
13483077-G-T | 11327401-G-T | ** | ||||||||
13483097-T-C | 11327421-T-C | ** | ||||||||
14183107-A-C | 12062401-A-C | ** | ||||||||
14569755-CAT-C | 12457955-CAT-C | ** | ||||||||
14964807-T-A | 12852882-T-A | ** | ||||||||
15056955-TTA-T | 12945047-TTA-T | ** | ||||||||
18869004-G-A | 16757124-G-A | ** | ||||||||
19326998-A-G | 17215118-A-G | ** | ||||||||
19677066-T-A | 17565186-T-A | P5_Prx | ** | |||||||
20689878-T-A | 18527992-T-A | P4_Prx | ** | |||||||
23192809-A-G | 21030923-A-G | ** | ||||||||
24310747-A-G | 22164600-A-G | P3_t1 | ** | |||||||
27525218-C-A | 25379071-C-A | P1_Y2 | ** | |||||||
28596562-A-T | 26450415-A-T | 12×T | ** | |||||||
13483228-C-A | 11327552-C-A | Z20974 | *** | |||||||
13805045-C-G | 11684339-C-G | *** | ||||||||
13805047-G-C | 11684341-G-C | *** | ||||||||
13860755-A-G | 11740049-A-G | *** | ||||||||
13143789-GCACAT-C | 10633275-GCACAT-C | *** | ||||||||
13802851-A-T | 11682145-A-T | *** | ||||||||
13800625-G-C | 11679919-G-C | *** | ||||||||
13800626-G-A | 11679920-G-A | FT65549 | *** | |||||||
9986795-G-T | 10149186-G-T | *** | ||||||||
13863554-A-C | 11742848-A-C | *** | ||||||||
13803469-T-A | 11682763-T-A | *** | ||||||||
13825476-C-T | 11704770-C-T | *** | ||||||||
13867436-T-A | 11746730-T-A | *** | ||||||||
28801685-T-G | 26655538-T-G | *** | ||||||||
23900042-TGGC-T | 21738156-TGGC-T | *** | ||||||||
9987776-T-C | 10150167-T-C | *** | ||||||||
3818174-C-G | 3950133-C-G | S8778 | *** | |||||||
13810068-C-CAAATGGAATA | 11689362-C-CAAATGGAATA | *** | ||||||||
13467238-T-A | 11311562-T-A | *** | ||||||||
3818153-G-T | 3950112-G-T | *** | ||||||||
13864574-T-C | 11743868-T-C | FT242522 | *** | |||||||
13196294-T-C | 11040618-T-C | *** | ||||||||
13196295-G-A | 11040619-G-A | 4×TTCCA | *** | |||||||
13465573-A-C | 11309897-A-C | *** | ||||||||
13847316-A-T | 11726610-A-T | *** | ||||||||
13865994-G-GGACTA | 11745288-G-GGACTA | *** | ||||||||
58979342-CTACTT-C | 56833195-CTACTT-C | *** | ||||||||
25572083-A-AT | 23425936-A-AT | P1_gr1 | 10×T | *** | ||||||
13859593-CAGAT-C,CGGAC | 11738887-CAGAT-C,CGGAC | *** | ||||||||
14272686-CTT-C,CT | 12151980-CTT-C,CT | 15×T | *** | |||||||
2842206-CTATTTATT-C | 2974165-CTATTTATT-C | 9×TATT | *** | |||||||
28390820-G-GA | 26244673-G-GA | P1_gr2 | 10×A | *** | ||||||
13458663-T-A | 11302987-T-A | *** | ||||||||
13486721-A-T | 11331045-A-T | *** | ||||||||
11001548-A-C,G | *** | |||||||||
13466021-C-T | 11310345-C-T | *** | ||||||||
13467245-G-C | 11311569-G-C | *** | ||||||||
56843133-T-C | *** | |||||||||
11643733-G-A | *** | |||||||||
10788064-C-A | *** | |||||||||
22023201-CTTTTTTT-C | 19861315-CTTTTTTT-C | 20×T | *** | |||||||
13453886-T-A | 11298210-T-A | *** | ||||||||
13453887-C-A | 11298211-C-A | *** | ||||||||
10835500-ACCATT-A | *** | |||||||||
7166800-C-A | 7298759-C-A | *** | ||||||||
13487778-C-G | 11332102-C-G | *** | ||||||||
13464463-T-A | 11308787-T-A | *** | ||||||||
21426020-CAA-C | 19264134-CAA-C | 12×A | *** | |||||||
10939632-C-A | *** | |||||||||
11654158-C-A | *** | |||||||||
10949906-T-C | *** | |||||||||
10978895-TCAC-T | *** | |||||||||
13486737-T-G | 11331061-T-G | *** | ||||||||
13486750-G-T | 11331074-G-T | *** | ||||||||
17527416-G-GTA | 15415536-G-GTA | *** | ||||||||
22541084-C-A | 20379198-C-A | *** | ||||||||
13485561-C-G | 11329885-C-G | *** | ||||||||
11006878-C-A | *** | |||||||||
10776130-C-G | *** | |||||||||
13446694-CCATTT-C,CCATT | 11291018-CCATTT-C,CCATT | *** | ||||||||
13457942-A-G | 11302266-A-G | *** | ||||||||
10693700-CTTCCGTTCCGTTGCA-C,CTTCCGTTCCGTTCCG | *** | |||||||||
6129813-G-C | 6261772-G-C | *** | ||||||||
6756908-CAAAAAAAA-C | 6888867-CAAAAAAAA-C | 26×A | *** | |||||||
10659165-C-A | *** | |||||||||
10661977-T-C | *** | |||||||||
10763052-C-G,T | *** | |||||||||
10783005-C-T | *** | |||||||||
10848009-C-A | *** | |||||||||
10920208-C-A | *** | |||||||||
10924226-TC-T | *** | |||||||||
10934908-CA-C | *** | |||||||||
10990064-TC-T | *** | |||||||||
13486695-A-G | 11331019-A-G | *** | ||||||||
14213709-A-G | 12093003-A-G | *** | ||||||||
15761913-A-C | 13650033-A-C | *** | ||||||||
16428004-A-G | 14316124-A-G | *** | ||||||||
18346473-CTG-C,CTGTG | 16234593-CTG-C,CTGTG | P6_Prx | 22×TG | *** | ||||||
18937580-C-T | 16825700-C-T | *** | ||||||||
21821726-C-A | 19659840-C-A | *** | ||||||||
24278183-CAAGA-C,CAAGAAAGAAAGA | 22132036-CAAGA-C,CAAGAAAGAAAGA | P3_b1 | 22×AAGA | *** | ||||||
25030077-G-A | 22883930-G-A | g1 | *** | |||||||
28792470-G-T | 26646323-G-T | *** | ||||||||
17029-C-A | *** | |||||||||
5397736-TA-T | 5529695-TA-T | 10×A | *** | |||||||
13467172-A-G | 11311496-A-G | *** | ||||||||
3807380-CT-C | 3939339-CT-C | 9×T | *** | |||||||
13470054-G-A | 11314378-G-A | *** | ||||||||
13470121-C-T | 11314445-C-T | *** | ||||||||
5007689-CAAAAA-C | 5139648-CAAAAA-C | 22×A | *** | |||||||
13477313-C-T | 11321637-C-T | *** | ||||||||
3377668-G-A | 3509627-G-A | *** | ||||||||
3786286-G-A | 3918245-G-A | *** | ||||||||
3985891-G-A | 4117850-G-A | *** | ||||||||
8968489-G-T | 9130880-G-T | *** | ||||||||
9411300-A-G | 9573691-A-G | *** | ||||||||
13283925-A-G | 11128249-A-G | *** | ||||||||
13467241-A-G | 11311565-A-G | *** | ||||||||
13477312-A-T | 11321636-A-T | *** | ||||||||
13487302-G-A | 11331626-G-A | *** | ||||||||
13545229-G-T | 11389553-G-T | *** | ||||||||
17575539-A-G | 15463659-A-G | *** | ||||||||
17859972-A-G | 15748092-A-G | *** | ||||||||
19359826-C-A | 17247946-C-A | *** | ||||||||
22690947-A-G | 20529061-A-G | *** | ||||||||
23291336-G-C | 21129450-G-C | *** | ||||||||
28701190-A-G | 26555043-A-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.