Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > L1335/S530 > L1065 > Z16325 > S744 > S764 > Z17611 > Z17612 > FGC17603 > FGC19785 > FGC19782

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
241056
FTDNA
241056
FGC-BigY
97P8W
13597758-C-T 11442082-C-T FGC19783 +***
18048548-G-T 15936668-G-T FGC19784 YY+++
22578776-G-A 20416890-G-A FGC19786 YY+++
14621417-G-C 12509615-G-C YY+**
56832595-T-A *
15203861-A-AAAC 13091947-A-AAAC 12×AAC*******
22559001-C-A 20397115-C-A YY*
5199709-T-G 5331668-T-G **
5127856-T-A 5259815-T-A **
5109306-A-G 5241265-A-G **
5059547-G-A 5191506-G-A **
5016022-G-T 5147981-G-T **
4732367-A-G 4864326-A-G **
4960488-T-C 5092447-T-C **
4903187-T-C 5035146-T-C **
4800488-G-T 4932447-G-T **
4638494-T-G 4770453-T-G **
4582461-T-C 4714420-T-C **
4541708-G-T 4673667-G-T **
4527430-A-G 4659389-A-G **
5213820-T-C 5345779-T-C **
6867506-G-A 6999465-G-A F4065 **
5213933-A-C 5345892-A-C **
5249798-T-A 5381757-T-A **
4386007-G-T 4517966-G-T **
5278797-G-T 5410756-G-T **
5292961-G-T 5424920-G-T **
5366899-C-T 5498858-C-T **
5366917-G-A 5498876-G-A **
5366950-C-G 5498909-C-G **
5366957-G-A 5498916-G-A **
5368296-G-T 5500255-G-T **
5409927-A-C 5541886-A-C **
5448683-C-A 5580642-C-A **
5461917-A-T 5593876-A-T **
5571703-G-C 5703662-G-C **
5571889-C-T 5703848-C-T **
4444959-G-T 4576918-G-T **
4261307-G-T 4393266-G-T **
4372010-G-T 4503969-G-T **
3954703-T-C 4086662-T-C **
3508359-A-T 3640318-A-T **
3508447-T-C 3640406-T-C **
3633630-T-G 3765589-T-G **
3633651-G-A 3765610-G-A **
3633706-C-T 3765665-C-T **
3644765-A-G 3776724-A-G **
3649717-G-T 3781676-G-T **
3679210-G-A 3811169-G-A **
3849093-T-C 3981052-T-C **
3849195-A-T 3981154-A-T **
3864348-G-T 3996307-G-T **
3895474-G-C 4027433-G-C **
3895590-A-C 4027549-A-C **
3940089-AT-A 4072048-AT-A **
3965364-T-C 4097323-T-C **
4371993-A-T 4503952-A-T **
3975324-C-T 4107283-C-T **
3975466-T-G 4107425-T-G **
4055492-A-T 4187451-A-T **
4081984-A-C 4213943-A-C **
4123750-A-G 4255709-A-G **
4155040-C-A 4286999-C-A **
4188024-G-T 4319983-G-T **
4215043-C-G 4347002-C-G **
4215084-A-C 4347043-A-C **
4240900-A-T 4372859-A-T **
4261179-A-G 4393138-A-G **
4261294-A-G 4393253-A-G **
5664487-C-T 5796446-C-T **
4371990-A-G 4503949-A-G **
5606828-T-C 5738787-T-C **
5749844-G-A 5881803-G-A **
5698545-G-T 5830504-G-T **
7996007-A-T 8127966-A-T **
7100665-T-C 7232624-T-C **
7111759-T-C 7243718-T-C **
7114195-C-A 7246154-C-A **
7166875-A-C 7298834-A-C **
7167246-T-A 7299205-T-A **
7170753-G-A 7302712-G-A **
7228354-A-T 7360313-A-T **
7275183-C-T 7407142-C-T **
7275186-C-T 7407145-C-T **
7422331-G-A 7554290-G-A **
7704716-A-T 7836675-A-T **
7923754-A-C 8055713-A-C **
7925063-C-T 8057022-C-T **
8017028-T-A 8148987-T-A **
7092391-C-T 7224350-C-T **
8058492-C-A 8190451-C-A **
8124931-A-C 8256890-A-C **
8568488-GC-A 8700447-GC-A **
8669032-C-A 8800991-C-A **
8669213-G-C 8801172-G-C **
8792955-C-A 8924914-C-A **
8913385-A-G 9045344-A-G **
9240723-G-A 9403114-G-A **
9320443-C-A 9482834-C-A **
9357071-G-A 9519462-G-A **
9398088-A-C 9560479-A-C **
9398102-G-T 9560493-G-T **
9444828-C-A 9607219-C-A **
9732216-T-C 9894607-T-C IR3_Prx **
7099128-A-G 7231087-A-G **
7012493-G-A 7144452-G-A **
5724776-G-T 5856735-G-T **
6305841-A-G 6437800-A-G IR3_Dst **
5749157-G-T 5881116-G-T **
3368146-A-C 3500105-A-C **
5818364-T-A 5950323-T-A **
5881490-C-A 6013449-C-A **
5960281-C-G 6092240-C-G **
6039745-T-C 6171704-T-C **
6039755-T-G 6171714-T-G **
6109950-A-AT 6241909-A-AT **
6120146-A-G 6252105-A-G **
6194494-G-A 6326453-G-A IR3_Dst **
6282971-T-A 6414930-T-A IR3_Dst **
6282996-C-A 6414955-C-A IR3_Dst **
6295512-T-TTA 6427471-T-TTA IR3_Dst **
6295540-C-T 6427499-C-T IR3_Dst **
6414509-A-G 6546468-A-G **
6998236-A-G 7130195-A-G **
6439087-G-T 6571046-G-T **
6596224-A-G 6728183-A-G **
6648250-T-C 6780209-T-C **
6694132-T-C 6826091-T-C **
6694165-A-C 6826124-A-C **
6694183-T-A 6826142-T-A **
6714657-C-A 6846616-C-A **
6720702-GT-G 6852661-GT-G **
6772289-C-A 6904248-C-A **
6786611-T-G 6918570-T-G **
6790466-C-A 6922425-C-A **
6806822-A-C 6938781-A-C **
6816736-C-CT 6948695-C-CT **
6816746-A-C 6948705-A-C **
3429856-A-T 3561815-A-T **
3240857-G-T 3372816-G-T **
3359123-A-C 3491082-A-C **
11663609-C-A **
16275984-T-C 14164104-T-C **
18928565-AAATAC-A 16816685-AAATAC-A **
20756747-T-G 18594861-T-G P4_Prx **
18439256-T-G 16327376-T-G P6_Dst **
10686690-C-A **
19817538-A-AG 17705658-A-AG P5_Prx **
10825325-T-C **
14472995-C-A 12352264-C-A **
5412572-C-A 5544531-C-A **
13902909-C-T 11782203-C-T **
10892542-TCATTCCATTC-T **
11022844-C-A **
16474841-G-T 14362961-G-T **
16056919-C-T 13945039-C-T **
14073181-C-A 11952475-C-A **
26415672-G-T 24269525-G-T P1_Y1 **
13996008-C-A 11875302-C-A **
3550575-A-AC 3682534-A-AC **
10795449-C-A **
14300750-C-A 12180044-C-A **
10994144-C-T **
17757649-A-G 15645769-A-G **
7285238-G-T 7417197-G-T **
4003142-C-A 4135101-C-A **
10652202-C-A **
6918396-C-A 7050355-C-A **
8822462-G-A 8954421-G-A **
10934725-C-A **
24634123-C-A 22487976-C-A P3_t2 **
2888868-C-G 3020827-C-G **
4389404-C-CAAA 4521363-C-CAAA 21×A**
20655091-T-A 18493205-T-A P4_Prx **
5511878-C-CT 5643837-C-CT 12×T**
23079330-C-A 20917444-C-A **
7424440-C-A 7556399-C-A **
14700739-G-GT 12588805-G-GT **
7038510-C-A 7170469-C-A **
3640815-C-T 3772774-C-T **
16056895-C-T 13945015-C-T **
7996849-C-A 8128808-C-A **
7335731-C-A 7467690-C-A **
9398065-C-A 9560456-C-A **
14253238-G-A 12132532-G-A **
10890395-G-C **
13596397-T-G 11440721-T-G **
10944791-C-A **
10899683-C-A **
13642718-C-A 11487042-C-A **
7140431-C-A 7272390-C-A **
11669824-C-A **
3069116-G-T 3201075-G-T **
16828884-C-A 14717004-C-A **
18035704-G-T 15923824-G-T **
10947917-A-T **
2854802-ATT-A 2986761-ATT-A 11×T**
14473734-C-A 12353003-C-A **
4386112-G-T 4518071-G-T **
14073187-CTTT-C 11952481-CTTT-C 27×T**
11026392-C-A **
16030059-C-A 13918179-C-A **
7200608-G-T 7332567-G-T **
10761884-C-A **
15769288-CA-C 13657408-CA-C **
10785368-C-A **
10971714-C-A **
3341353-T-A 3473312-T-A **
2787196-C-G 2919155-C-G **
14776909-C-A 12664978-C-A **
23047562-C-A 20885676-C-A **
9312878-A-G 9475269-A-G **
28480325-C-A 26334178-C-A **
14785029-AT-A 12673099-AT-A **
5221025-C-T 5352984-C-T **
13596373-C-A 11440697-C-A **
2812814-G-T 2944773-G-T **
10977027-A-C **
21141345-C-A 18979459-C-A **
26505539-A-C 24359392-A-C P1_Y1 **
4527386-C-A 4659345-C-A **
8379249-C-A 8511208-C-A **
2783656-A-C 2915615-A-C **
2795560-T-TA 2927519-T-TA **
15753224-A-G 13641344-A-G **
2817201-C-G 2949160-C-G **
2926482-C-T 3058441-C-T **
2926570-C-A 3058529-C-A **
2933005-T-G 3064964-T-G **
2947991-T-C 3079950-T-C **
2974223-G-T 3106182-G-T **
2974264-C-T 3106223-C-T **
2996725-G-T 3128684-G-T **
2996742-G-C 3128701-G-C **
2996756-A-T 3128715-A-T **
3045963-T-A 3177922-T-A **
3229184-G-GA 3361143-G-GA 8×A**
9929517-C-A 10091908-C-A **
3250624-A-T 3382583-A-T **
10693814-C-T **
3965347-A-G 4097306-A-G **
5842450-C-A 5974409-C-A **
22130177-C-A 19968291-C-A **
16056886-G-A 13945006-G-A **
16060491-T-G 13948611-T-G **
10959419-C-A **
15193655-C-A 13081741-C-A **
22215104-G-T 20053218-G-T **
3285011-G-T 3416970-G-T **
13938099-C-A 11817393-C-A **
3990510-C-A 4122469-C-A **
28661795-C-A 26515648-C-A **
14607757-T-G 12495959-T-G **
16357167-C-A 14245287-C-A **
28776777-C-A 26630630-C-A **
21220892-T-C 19059006-T-C **
17503174-G-T 15391294-G-T **
19244884-C-A 17133004-C-A **
28620555-T-A 26474408-T-A **
21118586-A-G 18956700-A-G **
10970656-T-G **
14050648-C-A 11929942-C-A **
23305772-C-A 21143886-C-A **
10988578-T-C **
10988596-A-C **
10970660-T-C **
10970661-C-G **
15126230-C-A 13014317-C-A **
13222066-A-G 11066390-A-G **
6577128-A-G 6709087-A-G **
10950656-C-A **
9939968-G-A 10102359-G-A **
10788445-C-A **
9732934-A-C 9895325-A-C IR3_Prx **
9948758-C-A 10111149-C-A **
9941413-A-T 10103804-A-T **
19249553-C-A 17137673-C-A **
17903366-C-A 15791486-C-A **
18003239-T-G 15891359-T-G P7_Gap **
18138361-TG-T 16026481-TG-T **
18361455-A-G 16249575-A-G P6_Prx **
18484036-G-C 16372156-G-C P6_Dst **
18484044-T-TA 16372164-T-TA P6_Dst **
18491442-T-A 16379562-T-A P6_Dst **
18650663-A-T 16538783-A-T **
18650666-G-T 16538786-G-T **
18650683-A-C 16538803-A-C **
18768316-C-A 16656436-C-A **
18871889-T-A 16760009-T-A **
19020256-T-A 16908376-T-A **
19301370-T-C 17189490-T-C **
17633162-T-A 15521282-T-A **
19330575-G-T 17218695-G-T **
19424050-C-A 17312170-C-A **
19463677-G-T 17351797-G-T **
19479912-T-C 17368032-T-C **
19809863-T-TA 17697983-T-TA P5_Prx **
20404476-AC-A 18242590-AC-A P5_Dst **
20428526-C-A 18266640-C-A P5_Dst **
20622535-A-C 18460649-A-C P4_Prx **
20622570-C-T 18460684-C-T P4_Prx **
20629839-T-G 18467953-T-G P4_Prx **
20655116-T-G 18493230-T-G P4_Prx **
20778816-T-G 18616930-T-G P4_Prx **
20801533-G-C 18639647-G-C P4_Prx **
20801542-A-T 18639656-A-T P4_Prx **
17636625-C-A 15524745-C-A **
17629546-A-G 15517666-A-G **
21118598-T-C 18956712-T-C **
17177275-G-A 15065395-G-A **
16505947-G-T 14394067-G-T **
16506881-A-C 14395001-A-C **
16662614-C-A 14550734-C-A **
16896557-G-GAA 14784677-G-GAA **
16987085-A-C 14875205-A-C **
16999096-A-G 14887216-A-G **
17013134-G-A 14901254-G-A **
17063558-A-T 14951678-A-T **
17070625-C-A 14958745-C-A **
17090834-A-G 14978954-A-G **
17155752-A-G 15043872-A-G **
17158618-T-C 15046738-T-C **
17177260-T-C 15065380-T-C **
17177264-T-C 15065384-T-C **
17181608-A-T 15069728-A-T **
17547779-T-C 15435899-T-C **
17217353-CCTT-C 15105473-CCTT-C **
17285146-T-G 15173266-T-G **
17337698-G-T 15225818-G-T **
17378550-C-A 15266670-C-A **
17385566-C-A 15273686-C-A **
17432527-G-T 15320647-G-T **
17432675-T-A 15320795-T-A **
17432716-A-T 15320836-A-T **
17432756-C-T 15320876-C-T **
17452909-C-T 15341029-C-T **
17490119-T-G 15378239-T-G **
17490132-T-G 15378252-T-G **
17492300-T-A 15380420-T-A **
17500604-G-A 15388724-G-A **
21118591-T-G 18956705-T-G **
21201893-C-A 19040007-C-A **
16270391-G-A 14158511-G-A **
28531354-C-A 26385207-C-A **
24290735-T-C 22144588-T-C P3_t1 **
24518025-C-T 22371878-C-T **
24535513-T-C 22389366-T-C P3_t2 **
25507684-T-C 23361537-T-C P1_gr1 **
26045878-G-T 23899731-G-T P1_Y1 **
26045885-C-T 23899738-C-T P1_Y1 **
26100570-C-A 23954423-C-A P1_Y1 **
26380316-A-G 24234169-A-G P1_Y1 **
26428135-T-TG 24281988-T-TG P1_Y1 **
26505552-T-C 24359405-T-C P1_Y1 **
27950547-A-AC 25804400-A-AC P1_Y2 **
28480423-G-A 26334276-G-A **
28500166-G-A 26354019-G-A **
28502491-G-A 26356344-G-A **
28536210-T-A 26390063-T-A **
23848148-G-C 21686262-G-C **
28543953-CA-C 26397806-CA-C 11×A**
28555490-G-T 26409343-G-T **
28591310-A-T 26445163-A-T **
28613771-CTTT-C 26467624-CTTT-C 16×T**
28651787-A-C 26505640-A-C **
28654423-G-T 26508276-G-T **
28762674-G-A 26616527-G-A **
28804617-G-A 26658470-G-A **
56724772-T-A **
56835505-C-A **
56846680-A-C **
56859263-A-G **
56862653-G-T **
7021-A-G **
23884435-A-AC 21722549-A-AC **
23602508-G-T 21440622-G-T **
21268023-C-A 19106137-C-A **
22662117-A-C 20500231-A-C **
21296940-A-G 19135054-A-G **
21297035-C-A 19135149-C-A **
21336679-C-A 19174793-C-A **
21368676-C-G 19206790-C-G **
21417360-G-C 19255474-G-C **
21450059-C-T 19288173-C-T **
21543306-C-A 19381420-C-A **
21582618-A-C 19420732-A-C **
21964976-C-A 19803090-C-A **
22011865-T-G 19849979-T-G **
22075855-A-C 19913969-A-C **
22113656-C-A 19951770-C-A **
22150568-A-T 19988682-A-T **
22436801-T-A 20274915-T-A DYZ19 **
22767447-T-G 20605561-T-G **
23475308-T-G 21313422-T-G **
22787256-C-G 20625370-C-G **
22852150-G-T 20690264-G-T **
22852165-T-G 20690279-T-G **
23066182-T-A 20904296-T-A **
23066221-T-C 20904335-T-C **
23066926-A-C 20905040-A-C **
23087608-G-T 20925722-G-T **
23094421-A-G 20932535-A-G **
23137173-T-C 20975287-T-C **
23185899-G-C 21024013-G-C **
23259290-G-T 21097404-G-T **
23305792-T-C 21143906-T-C **
23425281-T-C 21263395-T-C **
23425291-C-G 21263405-C-G **
16276030-T-A 14164150-T-A **
16181264-A-C 14069384-A-C **
9945644-T-A 10108035-T-A **
10987458-C-A **
10881805-C-T **
10893439-A-T **
10893791-C-T **
10899485-A-C **
10899793-C-A **
10906744-A-G **
10924452-C-A **
10934738-T-C **
10943728-C-G **
10965092-TATTCC-T **
10974174-A-C **
10979039-A-T **
10980536-C-A **
10988735-T-C **
10868729-T-C **
11000859-A-C **
11007203-C-A **
11009593-A-C **
11021791-C-A **
13261027-T-C 11105351-T-C **
13306282-C-A 11150606-C-A **
13357142-G-A 11201466-G-A **
13357145-T-G 11201469-T-G **
13357171-G-C 11201495-G-C **
13360254-C-T 11204578-C-T **
13421633-G-T 11265957-G-T **
13421638-C-T 11265962-C-T **
13442454-C-A 11286778-C-A **
13454531-C-A 11298855-C-A **
10880011-A-G **
10866741-C-A **
13480878-T-A 11325202-T-A **
10686711-C-A **
21503167-G-T 19341281-G-T **
9948823-G-A 10111214-G-A **
9948829-T-A 10111220-T-A **
9975120-C-T 10137511-C-T **
10048079-T-C 10210470-T-C **
10653777-T-C **
10667182-T-C **
10672874-G-A **
10672981-G-A **
10683669-C-A **
10686678-C-A **
10686692-ATT-A **
10686696-T-TTCAATCC **
10686708-T-G **
10686720-C-CTTCTT **
10866614-C-A **
10688863-A-C **
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6967897-A-G 7099856-A-G ***
6967896-C-T 7099855-C-T ***
16707175-C-A 14595295-C-A ***
6803877-C-A 6935836-C-A ***
6381801-A-G 6513760-A-G Y15808 16×TG***
6801067-A-G 6933026-A-G ***
6774843-T-C 6906802-T-C ***
6755775-C-A 6887734-C-A ***
6693536-C-A 6825495-C-A ***
6641735-T-C 6773694-T-C ***
6386030-T-C 6517989-T-C ***
6386028-T-C 6517987-T-C ***
6386023-T-C 6517982-T-C ***
6386013-T-C 6517972-T-C ***
13523412-A-T 11367736-A-T ***
13816409-A-C 11695703-A-C ***
13625703-C-A 11470027-C-A ***
58984181-G-T 56838034-G-T ***
58848216-A-C 56742655-T-G ***
58884863-T-A 56706008-A-T ***
58884865-C-T 56706006-G-A ***
58912838-C-T 56678033-G-A ***
58912841-C-G 56678030-G-C ***
58912842-C-T 56678029-G-A ***
58972445-G-T 56826298-G-T ***
58983436-C-T 56837289-C-T ***
8555564-T-TTTTTGC 8687523-T-TTTTTGC ***
28805738-G-C 26659591-G-C ***
9601586-CT-C 9763977-CT-C IR3_Prx 16×T***
3389040-CAA-TAT 3520999-CAA-TAT ***
3640490-T-TCTTC 3772449-T-TCTTC ***
6150048-TGAAA-T 6282007-TGAAA-T IR3_Dst ***
6226058-T-TCTTTCTTC 6358017-T-TCTTTCTTC IR3_Dst ***
6274458-GA-G 6406417-GA-G IR3_Dst ***
7075240-CAAAAAA-C 7207199-CAAAAAA-C 17×A***
8555556-T-TGTTTTA 8687515-T-TGTTTTA ***
28805856-T-A 26659709-T-A ***
28781005-C-A 26634858-C-A ***
9596248-GAAG-TAAT 9758639-GAAG-TAAT IR3_Prx ***
28360474-A-T 26214327-A-T P1_gr2 ***
27711634-C-A 25565487-C-A P1_Y2 ***
27775905-C-A 25629758-C-A P1_Y2 ***
27808427-G-T 25662280-G-T P1_Y2 ***
27890563-T-A 25744416-T-A P1_Y2 ***
28031602-A-C 25885455-A-C P1_Y2 ***
28149469-G-A 26003322-G-A P1_b4 ***
28360422-A-C 26214275-A-C P1_gr2 ***
20993553-T-C 18831667-T-C P4_Dst ***
28426049-T-G 26279902-T-G P1_gr2 ***
28774005-C-A 26627858-C-A ***
28426050-A-T 26279903-A-T P1_gr2 ***
28426157-C-T 26280010-C-T P1_gr2 ***
28426159-A-C 26280012-A-C P1_gr2 ***
28426182-T-C 26280035-T-C P1_gr2 ***
28507541-C-T 26361394-C-T ***
28583011-G-A 26436864-G-A ***
28594198-G-A 26448051-G-A ***
28724428-G-A 26578281-G-A ***
28725016-T-A 26578869-T-A ***
9561004-GAG-TAT 9723395-GAG-TAT IR3_Prx ***
9651318-GATG-TATT 9813709-GATG-TATT IR3_Prx ***
27368906-C-T 25222759-C-T P1_g3 ***
13869594-CA-GG 11748888-CA-GG ***
13744270-TGGA-GGGG 11588594-TGGA-GGGG ***
13801503-ACAAAG-GAAAAA 11680797-ACAAAG-GAAAAA ***
13828400-GT-AG 11707694-GT-AG ***
13835170-AAATAG-GAATGC 11714464-AAATAG-GAATGC ***
13835188-GGT-TGG 11714482-GGT-TGG ***
13835198-TGGAGTGGG-GGGAATGGA 11714492-TGGAGTGGG-GGGAATGGA ***
13858729-CGACTG-GGACGA 11738023-CGACTG-GGACGA ***
13861451-CTCAA-ATCAT 11740745-CTCAA-ATCAT ***
20984697-T-G 18822811-T-G P4_Dst ***
13489619-AC-CGT 11333943-AC-CGT ***
15221417-TCATA-CCATG 13109503-TCATA-CCATG ***
17946635-CTTTTTTT-C 15834755-CTTTTTTT-C 20×T***
21730548-ATTTTTTTTT-A 19568662-ATTTTTTTTT-A 23×T***
20945674-C-A 18783788-C-A P4_Dst ***
20945625-T-C 18783739-T-C P4_Dst ***
20920098-G-T 18758212-G-T P4_Dst ***
20882237-C-A 18720351-C-A P4_Dst ***
20875113-C-A 18713227-C-A P4_Dst ***
20869189-G-C 18707303-G-C P4_Dst ***
13712659-GAATA-AAATG 11556983-GAATA-AAATG ***
13486778-TCCC-CCTG 11331102-TCCC-CCTG ***
9657404-C-CA 9819795-C-CA IR3_Prx 12×A***
10081927-TTCTG-GTCTC 10244318-TTCTG-GTCTC ***
9692104-GG-TT 9854495-GG-TT IR3_Prx ***
9749589-CCCAC-ACCAA 9911980-CCCAC-ACCAA ***
9930064-CCCT-TCCC 10092455-CCCT-TCCC ***
9944168-CA-TG 10106559-CA-TG ***
9952446-TG-CA 10114837-TG-CA ***
9956934-AC-CT 10119325-AC-CT ***
9956968-GACACC-AACAGT 10119359-GACACC-AACAGT ***
10081903-GCACA-TCACG 10244294-GCACA-TCACG ***
10081943-TGT-CTA 10244334-TGT-CTA ***
13474099-ATCA-GTCT 11318423-ATCA-GTCT ***
10081960-TTCCACCAC-ATCGTCCAT 10244351-TTCCACCAC-ATCGTCCAT ***
13452660-CCACC-TCACT 11296984-CCACC-TCACT ***
13454814-TTCC-ACTG 11299138-TTCC-ACTG ***
13461256-CA-C 11305580-CA-C ***
13463942-TG-CA 11308266-TG-CA ***
13466468-CCC-GCG 11310792-CCC-GCG ***
13467957-CAG-TAC 11312281-CAG-TAC ***
13473744-AGAC-GGAG 11318068-AGAC-GGAG ***
13473764-GGGTG-TGGTT 11318088-GGGTG-TGGTT ***
27378335-C-G 25232188-C-G P1_g3 ***
27338177-A-G 25192030-A-G P1_g3 ***
20649818-T-C 18487932-T-C P4_Prx ***
22504799-C-G 20342913-C-G DYZ19 ***
22345706-T-G 20183820-T-G DYZ19 ***
22345711-G-A 20183825-G-A DYZ19 ***
22426688-T-A 20264802-T-A DYZ19 ***
22441115-T-C 20279229-T-C DYZ19 ***
22463836-G-A 20301950-G-A DYZ19 ***
22485970-T-A 20324084-T-A DYZ19 ***
22485983-G-T 20324097-G-T DYZ19 ***
22504791-A-C 20342905-A-C DYZ19 ***
22504826-T-G 20342940-T-G DYZ19 ***
22345690-G-C 20183804-G-C DYZ19 ***
22504829-T-A 20342943-T-A DYZ19 ***
22504832-G-T 20342946-G-T DYZ19 ***
22504843-G-T 20342957-G-T DYZ19 ***
22504886-A-T 20343000-A-T DYZ19 ***
22509471-C-A 20347585-C-A DYZ19 ***
22513031-C-T 20351145-C-T ***
22829469-C-A 20667583-C-A ***
22924603-C-A 20762717-C-A ***
22924605-T-A 20762719-T-A ***
22345703-C-T 20183817-C-T DYZ19 ***
22260919-G-A 20099033-G-A DYZ19 ***
22972576-T-C 20810690-T-C ***
21627014-A-T 19465128-A-T ***
21200701-C-G 19038815-C-G ***
21211723-C-A 19049837-C-A ***
21256040-G-A 19094154-G-A ***
21336392-G-T 19174506-G-T ***
21464528-C-A 19302642-C-A ***
21483434-C-A 19321548-C-A ***
21500232-T-A 19338346-T-A ***
21116954-C-A 18955068-C-A ***
21666843-G-A 19504957-G-A ***
22256235-C-A 20094349-C-A DYZ19 ***
21666848-C-T 19504962-C-T ***
21796696-G-T 19634810-G-T ***
21856789-T-C 19694903-T-C ***
21915880-C-A 19753994-C-A ***
22011226-C-A 19849340-C-A ***
21072841-C-A 18910955-C-A ***
22048518-A-C 19886632-A-C ***
22220124-C-T 20058238-C-T DYZ19 ***
22220151-G-T 20058265-G-T DYZ19 ***
22950355-C-A 20788469-C-A ***
22987689-C-A 20825803-C-A ***
27216554-G-T 25070407-G-T P1_g3 ***
25894173-T-C 23748026-T-C P1_Y1 ***
24600649-C-A 22454502-C-A P3_t2 ***
24601703-G-A 22455556-G-A P3_t2 ***
24601753-G-A 22455606-G-A P3_t2 ***
24614169-C-T 22468022-C-T P3_t2 ***
24889682-A-T 22743535-A-T g1 ***
25288834-A-C 23142687-A-C P2_r1 ***
25288861-C-A 23142714-C-A P2_r1 ***
25288870-A-C 23142723-A-C P2_r1 ***
25894180-G-A 23748033-G-A P1_Y1 ***
24582327-A-G 22436180-A-G P3_t2 ***
25937227-T-C 23791080-T-C P1_Y1 ***
25937257-G-A 23791110-G-A P1_Y1 ***
25999317-T-G 23853170-T-G P1_Y1 ***
26075244-A-T 23929097-A-T P1_Y1 ***
26394469-A-G 24248322-A-G P1_Y1 ***
26538910-T-C 24392763-T-C P1_g2 ***
27123197-C-A 24977050-C-A P1_g3 ***
27126979-G-T 24980832-G-T P1_g3 ***
27167544-T-C 25021397-T-C P1_g3 ***
24595279-G-A 22449132-G-A P3_t2 ***
24535508-A-G 22389361-A-G P3_t2 ***
23004066-A-C 20842180-A-C ***
23475458-C-A 21313572-C-A ***
21018805-T-G 18856919-T-G P4_Dst ***
23111948-T-G 20950062-T-G ***
23111952-C-T 20950066-C-T ***
23205260-C-A 21043374-C-A ***
23274833-A-G 21112947-A-G ***
23343736-C-T 21181850-C-T ***
23343737-A-G 21181851-A-G ***
23439934-A-G 21278048-A-G ***
23475665-G-T 21313779-G-T ***
24409299-A-G 22263152-A-G ***
23596898-T-C 21435012-T-C ***
23596899-G-A 21435013-G-A ***
23596902-T-C 21435016-T-C ***
23961110-C-A 21814963-C-A ***
23965791-G-T 21819644-G-T ***
23965792-C-G 21819645-C-G ***
23965794-A-T 21819647-A-T ***
24071338-C-A 21925191-C-A P3_b1 ***
24378664-C-A 22232517-C-A ***
20845364-A-G 18683478-A-G P4_Dst ***
20649800-C-T 18487914-C-T P4_Prx 4×TCTT***
13689345-G-T 11533669-G-T ***
15374558-C-T 13262678-C-T ***
15622694-T-C 13510814-T-C ***
15622689-T-A 13510809-T-A ***
15622688-A-G 13510808-A-G ***
15606347-G-T 13494467-G-T ***
15533373-C-A 13421493-C-A ***
15405313-C-A 13293433-C-A ***
15399779-C-A 13287899-C-A ***
15399775-C-A 13287895-C-A ***
15358568-C-A 13246687-C-A ***
15648148-C-A 13536268-C-A ***
15248999-G-C 13137085-G-C ***
15218490-C-T 13106576-C-T ***
15186898-G-T 13074984-G-T ***
15168425-C-A 13056511-C-A ***
15080172-C-A 12968262-C-A ***
15061774-C-T 12949866-C-T ***
15061773-C-T 12949865-C-T ***
15020740-C-A 12908829-C-A ***
14871398-G-A 12759468-G-A ***
15622695-A-G 13510815-A-G ***
15650508-T-C 13538628-T-C ***
14824223-C-A 12712290-C-A ***
10958446-G-T ***
16118966-A-G 14007086-A-G P8_Prx ***
16101968-G-T 13990088-G-T P8_Prx ***
16070682-C-A 13958802-C-A ***
16070544-T-C 13958664-T-C ***
16042017-C-A 13930137-C-A ***
16002882-T-C 13891002-T-C ***
15995101-C-A 13883221-C-A ***
15971805-C-A 13859925-C-A ***
15961890-G-T 13850010-G-T ***
15650513-A-G 13538633-A-G ***
15927859-A-G 13815979-A-G ***
13484057-G-C 11328381-G-C ***
15843087-A-T 13731207-A-T ***
15841893-C-A 13730013-C-A ***
15818392-C-A 13706512-C-A ***
15791095-G-A 13679215-G-A ***
11027440-C-A ***
15755247-C-A 13643367-C-A ***
15747505-G-T 13635625-G-T ***
14832143-C-T 12720210-C-T ***
14823667-A-G 12711734-A-G ***
16244840-C-A 14132960-C-A ***
13891652-C-A 11770946-C-A ***
14103066-C-A 11982360-C-A ***
14067965-A-G 11947259-A-G ***
14061453-C-A 11940747-C-A ***
13998192-A-T 11877486-A-T ***
13996776-C-A 11876070-C-A ***
13937788-C-A 11817082-C-A ***
13927283-T-A 11806577-T-A ***
13921498-T-A 11800792-T-A ***
13859433-T-G 11738727-T-G ***
14193502-C-A 12072796-C-A ***
13859429-G-A 11738723-G-A ***
13842752-G-A 11722046-G-A ***
21200700-A-T 19038814-A-T ***
13816408-C-G 11695702-C-G ***
13816407-T-A 11695701-T-A ***
13816404-T-G 11695698-T-G ***
13723308-A-C 11567632-A-C ***
13713211-A-C 11557535-A-C ***
13709609-G-T 11553933-G-T ***
14184565-C-A 12063859-C-A ***
14267013-A-C 12146307-A-C ***
14823666-C-T 12711733-C-T ***
14610751-C-G 12498953-C-G ***
14786618-C-A 12674688-C-A ***
14786615-A-G 12674685-A-G ***
14786614-C-T 12674684-C-T ***
14786328-C-A 12674398-C-A ***
14785132-G-T 12673202-G-T ***
14710520-A-G 12598587-A-G ***
14678481-C-A 12566547-C-A ***
14619729-C-A 12507927-C-A ***
14571934-C-A 12460134-C-A ***
14287034-G-T 12166328-G-T ***
14486052-G-A 12365321-G-A ***
14484961-G-T 12364230-G-T ***
14463639-G-A 12342912-G-A ***
14423428-A-G 12302703-A-G ***
14406762-C-T 12286060-C-T ***
14393416-G-T 12272712-G-T ***
14388519-C-A 12267815-C-A ***
14316434-C-A 12195728-C-A ***
14287051-G-T 12166345-G-T ***
16178671-C-A 14066791-C-A ***
21561728-C-A 19399842-C-A ***
20649789-C-T 18487903-C-T P4_Prx ***
15479974-C-T 13368094-C-T ***
19293609-A-T 17181729-A-T ***
19255592-C-A 17143712-C-A ***
19128730-G-A 17016850-G-A ***
19128715-T-A 17016835-T-A ***
19040233-T-A 16928353-T-A ***
19015496-C-A 16903616-C-A ***
19012539-G-C 16900659-G-C ***
19012481-C-A 16900601-C-A ***
18972624-A-C 16860744-A-C ***
7470725-AG-A 7602684-AG-A IR1_L ***
18951223-T-G 16839343-T-G ***
15863976-C-A 13752096-C-A ***
18895607-A-G 16783727-A-G ***
18792626-C-A 16680746-C-A ***
18783917-C-A 16672037-C-A ***
18647699-C-A 16535819-C-A ***
18611610-T-C 16499730-T-C ***
18492923-T-G 16381043-T-G P6_Dst ***
16988804-C-A 14876924-C-A ***
19346688-C-T 17234808-C-T ***
19346689-T-G 17234809-T-G ***
2909551-ATTT-A 3041510-ATTT-A 13×T***
20322074-C-T 18160188-C-T P5_Dst ***
20649782-G-C 18487896-G-C P4_Prx ***
20649772-G-T 18487886-G-T P4_Prx ***
20567196-T-C 18405310-T-C P5_Dst ***
20498309-C-A 18336423-C-A P5_Dst ***
20497347-C-T 18335461-C-T P5_Dst ***
20428449-C-T 18266563-C-T P5_Dst ***
20389495-G-T 18227609-G-T P5_Dst ***
20340687-A-G 18178801-A-G P5_Dst ***
18746982-CTT-C,CT 16635102-CTT-C,CT 13×T***
19346719-T-C 17234839-T-C ***
20102500-A-C 17990620-A-C P5_Dst ***
20102486-C-A 17990606-C-A P5_Dst ***
19877597-C-A 17765717-C-A P5_Prx ***
19829278-A-G 17717398-A-G P5_Prx ***
19678761-G-A 17566881-G-A P5_Prx ***
19517607-C-A 17405727-C-A ***
19517604-C-A 17405724-C-A ***
19439544-C-A 17327664-C-A ***
19358706-C-A 17246826-C-A ***
18430078-T-A 16318198-T-A P6_Dst ***
18283766-C-A 16171886-C-A P6_Prx ***
16246095-A-C 14134215-A-C ***
16575277-C-A 14463397-C-A ***
16765697-T-C 14653817-T-C ***
16765695-G-A 14653815-G-A ***
17419463-TTG-T 15307583-TTG-T ***
16689820-C-T 14577940-C-T ***
16625921-A-T 14514041-A-T ***
16592382-T-G 14480502-T-G ***
21617590-T-A 19455704-T-A ***
11643284-G-T ***
16541195-C-A 14429315-C-A ***
16832801-C-A 14720921-C-A ***
16464863-G-T 14352983-G-T ***
19531280-C-A 17419400-C-A ***
19547776-C-A 17435896-C-A ***
16450155-C-A 14338275-C-A ***
16416106-C-A 14304226-C-A ***
16409174-C-A 14297294-C-A ***
16353424-G-T 14241544-G-T ***
16311941-C-T 14200061-C-T ***
16283304-C-A 14171424-C-A ***
16765720-G-A 14653840-G-A ***
19309422-CATATAT-C 17197542-CATATAT-C 19×AT***
18248405-C-A 16136525-C-A ***
17718459-A-C 15606579-A-C ***
18220062-C-A 16108182-C-A ***
18195219-G-T 16083339-G-T ***
18011226-G-T 15899346-G-T P7_Dst ***
21456016-CT-C 19294130-CT-C ***
17890690-C-A 15778810-C-A ***
17884539-G-T 15772659-G-T ***
10794259-CAATCCACTCT-C,CAGTCCACTCT ***
17834421-A-G 15722541-A-G ***
17674702-C-A 15562822-C-A ***
17367849-C-A 15255969-C-A ***
17654942-A-G 15543062-A-G ***
17615661-C-A 15503781-C-A ***
17555748-C-A 15443868-C-A ***
17478344-C-A 15366464-C-A ***
17420929-C-A 15309049-C-A ***
17355707-C-A 15243827-C-A ***
16986996-C-T 14875116-C-T ***
16981055-C-A 14869175-C-A ***
16920141-A-G 14808261-A-G ***
28360455-T-G 26214308-T-G P1_gr2 ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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