Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > M222 > DF106 > DF104 > DF105 > DF85 > S673 > S668 > BY11548 > A10680

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
B3380
BigY2
B3380
Manual
Edits
28817355-G-A 26671208-G-A A*
13687817-G-C 11532141-G-C A*
23765037-C-A 21603151-C-A Y**+
23765040-G-A 21603154-G-A Y**+
7742251-A-G 7874210-A-G A10678 YY++
7055090-C-T 7187049-C-T A10677 YY++
14221484-GT-G 12100778-GT-G ++
21187134-C-T 19025248-C-T A10682 YY++
18646664-T-C 16534784-T-C A10681 YY++
14593750-G-T 12481950-G-T **
12379506-C-A **
14769207-C-A 12657276-C-A **
14755557-TG-T 12643626-TG-T **
14736070-T-C 12624138-T-C **
14679236-C-A 12567302-C-A **
14369144-C-A 12248440-C-A **
14622237-C-A 12510435-C-A **
14423309-C-T 12302584-C-T **
14493535-C-A 12381732-C-A **
14593014-A-G 12481214-A-G **
14507597-A-G 12395802-A-G **
14544210-C-A 12432411-C-A **
14558608-A-G 12446809-A-G **
14622108-C-T 12510306-C-T **
14582274-A-T 12470474-A-T **
14582390-C-A 12470590-C-A **
14621485-C-A 12509683-C-A **
14566646-G-GCTGT 12454846-G-GCTGT **
13857946-C-G 11737240-C-G **
15070325-G-A 12958416-G-A **
14025475-C-A 11904769-C-A **
11670821-T-A **
13800736-T-A 11680030-T-A **
13800741-A-C 11680035-A-C **
13850685-T-A 11729979-T-A **
13871238-T-C 11750532-T-C **
13929785-G-A 11809079-G-A **
13946032-C-A 11825326-C-A **
13990212-C-A 11869506-C-A **
13990223-C-A 11869517-C-A **
14030362-T-C 11909656-T-C **
14316343-C-A 12195637-C-A **
14061428-C-T 11940722-C-T **
14061434-G-C 11940728-G-C **
14079518-A-G 11958812-A-G **
14108959-C-A 11988253-C-A **
14113853-C-A 11993147-C-A **
14181445-C-A 12060739-C-A **
14193141-A-T 12072435-A-T **
14201926-C-T 12081220-C-T **
14284225-T-A 12163519-T-A **
14313740-G-T 12193034-G-T **
14901345-A-G 12789412-A-G **
15288956-T-C 13177055-T-C **
15176991-C-A 13065077-C-A **
16437195-C-A 14325315-C-A **
15696982-G-A 13585102-G-A **
15726426-C-A 13614546-C-A **
15909548-C-A 13797668-C-A **
16007159-C-A 13895279-C-A **
16015727-T-C 13903847-T-C **
16045310-C-A 13933430-C-A **
16274360-C-A 14162480-C-A **
16275574-C-A 14163694-C-A **
16437485-A-T 14325605-A-T **
15685292-C-A 13573412-C-A **
16437997-C-A 14326117-C-A **
16455305-C-A 14343425-C-A **
16485823-C-A 14373943-C-A **
16520992-CAAAAA-C 14409112-CAAAAA-C 16×A**
16562717-G-T 14450837-G-T **
16598532-C-T 14486652-C-T **
16601437-T-CC 14489557-T-CC **
16620305-C-T 14508425-C-T **
15685312-G-T 13573432-G-T **
15644957-C-A 13533077-C-A **
15177910-T-A 13065996-T-A **
15379272-C-CT 13267392-C-CT 9×T**
15180781-C-A 13068867-C-A **
15235514-C-G 13123600-C-G **
11668636-C-A **
15332245-C-T 13220363-C-T **
15359460-A-G 13247580-A-G **
15364580-A-C 13252700-A-C **
15374607-T-C 13262727-T-C **
15374608-G-T 13262728-G-T **
15391122-C-A 13279242-C-A **
15604221-G-A 13492341-G-A **
15405239-G-GT 13293359-G-GT **
15424299-G-T 13312419-G-T **
15438904-A-T 13327024-A-T **
15439887-G-T 13328007-G-T **
15457902-C-G 13346022-C-G **
15515281-C-A 13403401-C-A **
15556041-T-C 13444161-T-C **
15564098-C-A 13452218-C-A **
15604212-G-T 13492332-G-T **
11669710-G-A **
13527736-T-A 11372060-T-A **
11665578-T-C **
10652461-C-G **
9937841-T-G 10100232-T-G **
9963356-C-A 10125747-C-A **
9967069-C-A 10129460-C-A **
9975275-G-T 10137666-G-T **
10040153-T-A 10202544-T-A **
10040620-TA-T 10203011-TA-T **
10647856-C-A **
10648093-A-ATTAGT **
10652473-A-G **
9830890-T-G 9993281-T-G **
10663003-TC-T **
10669574-C-A **
10672920-C-A **
10693280-C-A **
10755411-C-T **
10763184-TC-T **
10780375-T-C **
10780421-TC-T **
10788583-A-T **
9890952-C-A 10053343-C-A **
9820616-G-A 9983007-G-A **
10788600-G-C **
8699655-A-C 8831614-A-C **
8159584-T-G 8291543-T-G **
8171984-C-T 8303943-C-T **
8237467-C-T 8369426-C-T **
8237480-A-C 8369439-A-C **
8384828-G-T 8516787-G-T **
8385304-C-A 8517263-C-A **
8698021-C-A 8829980-C-A **
8699629-A-C 8831588-A-C **
8720039-G-T 8851998-G-T **
9655559-C-A 9817950-C-A IR3_Prx **
8840603-A-G 8972562-A-G **
8854377-T-C 8986336-T-C **
8855232-T-C 8987191-T-C **
8901220-T-C 9033179-T-C **
8907569-C-A 9039528-C-A **
9117879-A-T **
9372193-C-A 9534584-C-A **
9482528-G-T 9644919-G-T **
9486104-C-A 9648495-C-A **
10788591-T-C **
10788623-CA-C **
13628912-C-A 11473236-C-A **
13303004-C-A 11147328-C-A **
10987212-C-T **
11020113-C-A **
11022861-C-A **
11031640-C-A **
13226556-G-T 11070880-G-T **
13252634-C-T 11096958-C-T **
13271666-A-T 11115990-A-T **
13297998-C-A 11142322-C-A **
13384621-C-A 11228945-C-A **
10973048-C-A **
13456707-G-T 11301031-G-T **
13472097-G-A 11316421-G-A **
13476387-C-A 11320711-C-A **
13487679-C-A 11332003-C-A **
13487722-C-A 11332046-C-A **
13495739-C-A 11340063-C-A **
13527623-A-G 11371947-A-G **
16687419-T-G 14575539-T-G **
13585220-C-A 11429544-C-A **
10973092-C-A **
10967553-C-G **
10788629-A-TG **
10802390-C-CATTT **
10788644-ATTC-A **
10788649-ATTCTACTCCCTT-A **
10788668-A-C **
10788675-A-C **
10788692-C-CCTCTT **
10788708-C-T **
10788717-G-A **
10789015-C-A **
10809117-C-A **
10950164-C-A **
10811464-C-A **
10821049-C-A **
10824172-C-CGG **
10824174-T-TGAC **
10837019-C-A **
10888537-A-C **
10909774-C-A **
10938547-A-G **
10947576-C-A **
16662432-G-T 14550552-G-T **
16742965-A-G 14631085-A-G **
16687464-A-G 14575584-A-G **
22878043-G-T 20716157-G-T **
22236235-A-ATTCT 20074349-A-ATTCT DYZ19 **
22236244-G-C 20074358-G-C DYZ19 **
22241595-C-G 20079709-C-G DYZ19 **
22537117-C-A 20375231-C-A **
22537252-G-T 20375366-G-T **
22541066-C-A 20379180-C-A **
22787085-A-G 20625199-A-G **
22824828-C-A 20662942-C-A **
23004759-A-G 20842873-A-G **
22125058-C-A 19963172-C-A **
23004802-T-G 20842916-T-G **
23004836-T-C 20842950-T-C **
23004838-A-G 20842952-A-G **
23039626-G-A 20877740-G-A **
23060283-G-C 20898397-G-C **
23060293-T-C 20898407-T-C **
23065820-T-G 20903934-T-G **
23120095-C-A 20958209-C-A **
22146339-C-A 19984453-C-A **
22122868-C-T 19960982-C-T **
23203804-C-T 21041918-C-T **
21545373-C-A 19383487-C-A **
21107567-C-A 18945681-C-A **
21110047-A-G 18948161-A-G **
21139512-G-C 18977626-G-C **
21141093-C-A 18979207-C-A **
21201609-C-A 19039723-C-A **
21209047-ATGGG-A 19047161-ATGGG-A **
21230036-C-A 19068150-C-A **
21391522-A-G 19229636-A-G **
21614812-A-G 19452926-A-G **
21974904-G-T 19813018-G-T **
21639004-G-A 19477118-G-A **
21673313-CAGTATATGGAAG-C 19511427-CAGTATATGGAAG-C **
21748361-T-C 19586475-T-C **
21836170-GC-G 19674284-GC-G **
21852631-G-T 19690745-G-T **
21899788-C-A 19737902-C-A **
21912063-G-T 19750177-G-T **
21947178-C-A 19785292-C-A **
21951984-C-A 19790098-C-A **
23189623-C-A 21027737-C-A **
23206973-C-A 21045087-C-A **
21039388-C-A 18877502-C-A **
28660409-C-A 26514262-C-A **
27947064-T-TAG 25800917-T-TAG P1_Y2 **
27968143-C-CACAGG 25821996-C-CACAGG P1_Y2 **
28068184-G-T 25922037-G-T P1_Y2 **
28462008-C-T 26315861-C-T **
28509678-C-A 26363531-C-A **
28510428-T-G 26364281-T-G **
28545843-C-A 26399696-C-A **
28658274-C-A 26512127-C-A **
28697922-A-G 26551775-A-G **
26004669-T-TTCTGTC 23858522-T-TTCTGTC P1_Y1 **
28700009-C-A 26553862-C-A **
28756280-C-T 26610133-C-T **
28797807-G-A 26651660-G-A **
56735558-G-A **
56841129-C-T **
56849644-A-C **
11356-T-A **
11357-C-A **
29515-C-T **
27795462-G-GTA 25649315-G-GTA P1_Y2 **
25945003-T-TG 23798856-T-TG P1_Y1 **
23207026-G-A 21045140-G-A ZQ823 **
23742196-G-A 21580310-G-A **
23260664-A-G 21098778-A-G **
23293623-T-C 21131737-T-C **
23368736-G-T 21206850-G-T **
23381881-C-T 21219995-C-T **
23440760-T-G 21278874-T-G **
23563722-C-A 21401836-C-A **
23625467-A-C 21463581-A-C **
23625470-T-C 21463584-T-C **
23837163-C-A 21675277-C-A **
25572153-A-G 23426006-A-G P1_gr1 **
24290826-C-T 22144679-C-T P3_t1 **
24353136-T-C 22206989-T-C P3_t1 **
24353138-T-C 22206991-T-C P3_t1 **
24353139-G-C 22206992-G-C P3_t1 **
24353148-T-C 22207001-T-C P3_t1 **
24422560-G-A 22276413-G-A **
24424192-G-T 22278045-G-T **
24449940-C-A 22303793-C-A **
24468990-G-T 22322843-G-T **
21049003-C-A 18887117-C-A **
20770485-C-CTCCTG 18608599-C-CTCCTG P4_Prx **
16687531-G-C 14575651-G-C **
17735393-G-T 15623513-G-T **
17459081-C-A 15347201-C-A **
17470820-G-T 15358940-G-T **
17559845-A-G 15447965-A-G **
17559849-C-T 15447969-C-T **
17559853-C-T 15447973-C-T **
17559857-C-A 15447977-C-A **
17579753-C-A 15467873-C-A **
17728744-C-T 15616864-C-T **
17847580-C-A 15735700-C-A **
17399624-T-G 15287744-T-G **
17923449-G-A 15811569-G-A **
17926396-G-T 15814516-G-T **
17951759-G-A 15839879-G-A **
17953716-C-A 15841836-C-A **
17968578-G-T 15856698-G-T **
17968660-G-A 15856780-G-A **
18019191-C-A 15907311-C-A **
18020692-C-A 15908812-C-A **
17413232-C-A 15301352-C-A **
17335143-TA-T 15223263-TA-T **
18138032-C-A 16026152-C-A **
17085640-C-A 14973760-C-A **
16687569-C-T 14575689-C-T **
16734803-G-T 14622923-G-T **
8078063-G-T 8210022-G-T **
16829846-C-A 14717966-C-A **
16874986-C-T 14763106-C-T **
16926144-G-C 14814264-G-C **
17001991-C-T 14890111-C-T **
17038612-C-A 14926732-C-A **
17110415-A-G 14998535-A-G **
17327324-G-C 15215444-G-C **
17110420-G-C 14998540-G-C **
17128022-T-A 15016142-T-A **
17130539-C-T 15018659-C-T **
17193236-A-T 15081356-A-T **
17217348-C-G 15105468-C-G **
17222300-C-A 15110420-C-A **
17263181-AC-A 15151301-AC-A **
17313712-T-A 15201832-T-A **
17320587-C-A 15208707-C-A **
18020716-C-A 15908836-C-A **
18185087-A-G 16073207-A-G **
20637532-A-T 18475646-A-T P4_Prx **
19675529-C-A 17563649-C-A P5_Prx **
19393331-T-G 17281451-T-G **
19479851-T-G 17367971-T-G **
19479886-T-A 17368006-T-A **
19490896-C-A 17379016-C-A **
19498163-C-A 17386283-C-A **
19530533-C-A 17418653-C-A **
19598850-A-ACAG 17486970-A-ACAG P5_Prx **
19622135-C-A 17510255-C-A P5_Prx **
19754973-C-A 17643093-C-A P5_Prx **
19270599-C-A 17158719-C-A **
19775252-T-C 17663372-T-C P5_Prx **
19788070-A-AACAG 17676190-A-AACAG P5_Prx **
19827098-A-AC 17715218-A-AC P5_Prx **
19832335-A-G 17720455-A-G P5_Prx **
19846570-T-C 17734690-T-C P5_Prx **
20032110-A-AG 17920230-A-AG P5_Prx **
20084500-T-TC 17972620-T-TC P5_Dst **
20409586-G-T 18247700-G-T P5_Dst **
20481357-T-TCTG 18319471-T-TCTG P5_Dst **
19356905-T-A 17245025-T-A **
19244592-G-A 17132712-G-A **
18190173-T-C 16078293-T-C **
18767800-G-A 16655920-G-A M2588 **
18270349-C-A 16158469-C-A **
18274932-G-A 16163052-G-A P6_Prx **
18421656-C-A 16309776-C-A P6_Gap **
18572740-T-A 16460860-T-A **
18634806-C-A 16522926-C-A **
18650491-C-A 16538611-C-A **
18688500-C-G 16576620-C-G 20×A**
18742365-A-C 16630485-A-C **
18824531-C-A 16712651-C-A **
19161985-C-A 17050105-C-A **
18963934-C-G 16852054-C-G **
18966276-G-T 16854396-G-T **
18994399-C-A 16882519-C-A **
19053133-G-C 16941253-G-C **
19075644-C-A 16963764-C-A **
19084561-A-T 16972681-A-T **
19126310-T-C 17014430-T-C **
19143198-C-T 17031318-C-T **
19161189-C-A 17049309-C-A **
8110505-C-A 8242464-C-A **
36481-A-T **
5204565-C-A 5336524-C-A **
22273562-C-A 20111676-C-A DYZ19 **
10768579-G-A **
25395691-G-T 23249544-G-T P2_r2 **
22241587-G-A 20079701-G-A DYZ19 **
22561390-T-A 20399504-T-A 10×A**
16092754-G-T 13980874-G-T **
20840951-C-A 18679065-C-A P4_Gap **
28773888-C-A 26627741-C-A **
9516914-A-AT 9679305-A-AT 10×T**
28499462-C-A 26353315-C-A **
28530998-G-A 26384851-G-A **
15576884-G-T 13465004-G-T **
4749671-G-T 4881630-G-T **
2738773-T-C 2870732-T-C **
10788676-C-T **
10973600-T-A **
24353156-T-TAA 22207009-T-TAA P3_t1 **
10969814-C-A **
14330868-C-A 12210162-C-A **
22289385-G-T 20127499-G-T DYZ19 **
23184174-C-A 21022288-C-A **
10651568-C-A **
16093938-C-A 13982058-C-A **
14009414-C-A 11888708-C-A **
11027298-C-A **
10892649-C-A **
24523492-G-T 22377345-G-T **
9926704-C-A 10089095-C-A **
6085938-C-A 6217897-C-A **
23304476-C-A 21142590-C-A **
10858887-C-A **
10780429-G-A **
10789690-T-A **
13487685-C-T 11332009-C-T **
24381232-CAA-C 22235085-CAA-C 10×A**
15219064-C-A 13107150-C-A **
10788589-C-A **
23625451-A-T 21463565-A-T **
6882024-C-A 7013983-C-A **
25988043-A-T 23841896-A-T P1_Y1 **
10967521-T-C **
18792815-C-A 16680935-C-A **
18183245-C-A 16071365-C-A **
21939545-C-A 19777659-C-A **
16906857-C-A 14794977-C-A **
9980666-C-A 10143057-C-A **
22776920-C-A 20615034-C-A **
20535097-C-A 18373211-C-A P5_Dst **
8036061-C-A 8168020-C-A **
8281669-C-A 8413628-C-A **
5220501-C-A 5352460-C-A **
10768586-C-T **
14366335-C-A 12245630-C-A **
7359743-A-T 7491702-A-T 11×AT**
19479845-G-T 17367965-G-T **
5127655-C-A 5259614-C-A **
21531514-C-A 19369628-C-A **
13856356-T-G 11735650-T-G **
13226525-C-A 11070849-C-A **
16430466-C-A 14318586-C-A **
13258795-C-A 11103119-C-A **
22598718-C-A 20436832-C-A **
2843058-C-A 2975017-C-A **
10673853-C-G **
20637572-G-GAGATAGAT 18475686-G-GAGATAGAT P4_Prx **
28778852-C-CTT 26632705-C-CTT 33×T**
13461002-G-T 11305326-G-T **
14502041-C-A 12390246-C-A **
13233578-C-A 11077902-C-A **
10895813-CTCCAT-C **
23381893-A-T 21220007-A-T **
21703271-C-A 19541385-C-A **
14785447-C-A 12673517-C-A **
23294190-T-C 21132304-T-C **
14846878-C-T 12734944-C-T **
10967526-T-C **
6778889-C-A 6910848-C-A **
8699651-C-A 8831610-C-A **
56841106-C-A **
2696391-C-A 2828350-C-A **
10004805-C-A 10167196-C-A **
23097867-C-A 20935981-C-A **
10801664-T-C **
10801678-A-T **
8840556-C-A 8972515-C-A **
10987815-A-C **
10991254-C-T **
21105514-ATTT-A 18943628-ATTT-A 13×T**
10937654-C-T **
10971932-C-T **
7131278-C-A 7263237-C-A **
7035691-C-A 7167650-C-A **
22489655-T-C 20327769-T-C DYZ19 **
9980040-C-A 10142431-C-A **
6835607-C-G 6967566-C-G **
23193231-C-A 21031345-C-A **
9940181-C-A 10102572-C-A **
10999888-C-G **
22876428-C-A 20714542-C-A **
6102336-C-A 6234295-C-A **
19522756-C-A 17410876-C-A **
24575877-T-TC 22429730-T-TC P3_t2 **
10976959-G-T **
22755629-C-A 20593743-C-A **
10955497-A-ACT **
9310605-C-A 9472996-C-A **
10746908-A-G **
10780440-A-C **
10801687-C-CACTGA **
13705504-T-A 11549828-T-A **
13487757-C-T 11332081-C-T **
17056554-CTA-C 14944674-CTA-C **
19831753-A-AC 17719873-A-AC P5_Prx **
3815117-G-T 3947076-G-T **
14203262-T-TA 12082556-T-TA 9×A**
4626255-C-A 4758214-C-A **
10976978-A-C **
13604363-C-A 11448687-C-A **
13487768-C-T 11332092-C-T **
10992734-C-A **
24424252-G-T 22278105-G-T **
10991251-A-G **
10967537-C-T **
28068165-T-TGG 25922018-T-TGG P1_Y2 **
17346533-G-GA 15234653-G-GA 8×A**
28791023-C-T 26644876-C-T **
14031845-C-A 11911139-C-A **
7196602-C-A 7328561-C-A **
10999875-A-AATTCT **
16897643-CAAA-C 14785763-CAAA-C 23×A**
10987192-C-A **
22690853-G-T 20528967-G-T **
13509729-C-A 11354053-C-A **
8218222-C-A 8350181-C-A **
15785826-C-A 13673946-C-A **
13487782-C-A 11332106-C-A **
18388339-G-A 16276459-G-A P6_Gap **
21713476-C-A 19551590-C-A **
7202289-T-C 7334248-T-C **
14980946-C-A 12869022-C-A **
10971928-A-T **
12675896-ATAT-A **
23004844-T-A 20842958-T-A **
21285576-C-A 19123690-C-A **
3286376-C-A 3418335-C-A **
17246805-C-A 15134925-C-A **
14284989-C-A 12164283-C-A **
20019186-T-TC 17907306-T-TC P5_Prx **
21317564-C-A 19155678-C-A **
13856367-G-C 11735661-G-C **
21222121-C-A 19060235-C-A **
22189224-C-A 20027338-C-A **
18634808-C-A 16522928-C-A **
13446646-A-C 11290970-A-C **
6384691-G-T 6516650-G-T **
10788613-C-A **
9978955-C-A 10141346-C-A **
7088537-C-A 7220496-C-A **
21545361-C-A 19383475-C-A **
8276212-C-A 8408171-C-A **
2697356-G-A 2829315-G-A **
6771766-C-T 6903725-C-T **
6411267-C-A 6543226-C-A **
6435107-T-A 6567066-T-A **
6520034-A-G 6651993-A-G **
6619293-T-A 6751252-T-A **
6732636-T-C 6864595-T-C **
6771472-C-A 6903431-C-A **
6850974-C-A 6982933-C-A **
6096380-G-T 6228339-G-T **
6856641-C-A 6988600-C-A **
59000605-C-G 56854458-C-G **
6888530-A-G 7020489-A-G **
6926691-C-A 7058650-C-A **
28801807-G-A 26655660-G-A **
6929994-T-G 7061953-T-G **
6934633-C-A 7066592-C-A **
6368793-T-G 6500752-T-G **
15803376-C-A 13691496-C-A **
7078410-T-C 7210369-T-C **
5586153-G-T 5718112-G-T **
5108275-G-A 5240234-G-A **
5127678-T-C 5259637-T-C **
5231242-C-A 5363201-C-A **
5336728-C-T 5468687-C-T **
5412097-A-G 5544056-A-G **
5446996-A-T 5578955-A-T **
5462328-G-T 5594287-G-T **
5609278-T-G 5741237-T-G **
5944646-G-A 6076605-G-A **
5609333-T-G 5741292-T-G **
5668738-C-A 5800697-C-A **
5672792-G-T 5804751-G-T **
5687581-A-G 5819540-A-G **
5796652-A-T 5928611-A-T **
5799176-G-T 5931135-G-T **
5805194-C-A 5937153-C-A **
13714254-T-A 11558578-T-A **
7085318-CA-C 7217277-CA-C **
5039285-ACTGGTGTGTGGGATATGGTTGC-A 5171244-ACTGGTGTGTGGGATATGGTTGC-A **
7655335-C-A 7787294-C-A **
7400209-T-C 7532168-T-C **
7412855-C-A 7544814-C-A **
7451919-C-T 7583878-C-T IR1_L **
7590942-A-G 7722901-A-G **
17559833-C-T 15447953-C-T CTS7606 ****
3606672-G-GT 3738631-G-GT 19×T**
7640747-C-A 7772706-C-A **
16062000-C-A 13950120-C-A ****
7374447-T-C 7506406-T-C **
7704598-T-C 7836557-T-C **
7782910-C-A 7914869-C-A **
7860621-C-T 7992580-C-T **
7862270-C-A 7994229-C-A **
19683853-A-T 17571973-A-T P5_Prx **
7917058-G-T 8049017-G-T **
15730404-C-A 13618524-C-A **
7390453-T-G 7522412-T-G **
7359742-T-A 7491701-T-A YFS068775 **
7086903-C-A 7218862-C-A **
13828327-G-A 11707621-G-A YFS032979 S14723 FGC2058 Z15673 S14713 **
13271621-C-G 11115945-C-G **
7098486-G-T 7230445-G-T **
7123764-C-A 7255723-C-A **
58855327-C-G 56735544-G-C **
26391527-T-TAC 24245380-T-TAC P1_Y1 21×AC**
7140385-G-C 7272344-G-C **
16064132-T-G 13952252-T-G **
7152538-T-C 7284497-T-C **
21084421-A-G 18922535-A-G F23867 **
7186077-C-A 7318036-C-A **
7228291-C-A 7360250-C-A **
7239381-A-T 7371340-A-T **
7239389-C-G 7371348-C-G **
7241039-C-G 7372998-C-G **
7241945-G-T 7373904-G-T **
7312002-C-A 7443961-C-A **
5099218-T-G 5231177-T-G **
5435880-G-A 5567839-G-A **
4898109-T-G 5030068-T-G **
4050195-C-A 4182154-C-A **
3833516-C-A 3965475-C-A **
3833603-G-A 3965562-G-A **
3839146-G-T 3971105-G-T **
3903821-G-T 4035780-G-T **
3950849-A-G 4082808-A-G **
4017073-A-T 4149032-A-T **
4103152-C-A 4235111-C-A **
3598990-C-A 3730949-C-A **
4163068-A-G 4295027-A-G **
4862502-CAATCATTTATAATTTATAATCATTTAT-C 4994461-CAATCATTTATAATTTATAATCATTTAT-C **
17864051-TA-T 15752171-TA-T **
4287876-A-G 4419835-A-G **
4287990-G-T 4419949-G-T **
4288094-G-C 4420053-G-C **
3622247-G-A 3754206-G-A **
3436236-C-CCAG 3568195-C-CCAG **
4357751-TA-T 4489710-TA-T **
3046023-C-A 3177982-C-A **
2738768-T-C 2870727-T-C **
2774102-C-A 2906061-C-A **
2803378-C-T 2935337-C-T **
2803862-A-T 2935821-A-T **
2869024-T-C 3000983-T-C **
2908996-C-A 3040955-C-A **
3048161-C-T 3180120-C-T **
3336818-C-A 3468777-C-A **
3061029-T-C 3192988-T-C **
15151434-T-A 13039521-T-A **
3252486-A-T 3384445-A-T **
3274832-G-T 3406791-G-T **
3275427-G-T 3407386-G-T **
3276768-G-T 3408727-G-T **
4288099-A-C 4420058-A-C **
4287865-A-G 4419824-A-G **
4590109-G-T 4722068-G-T **
4547633-G-T 4679592-G-T **
4697372-A-G 4829331-A-G **
4665834-A-C 4797793-A-C **
4665823-A-C 4797782-A-C **
4749620-A-G 4881579-A-G **
4769185-C-A 4901144-C-A **
13487688-C-A 11332012-C-A **
16064138-A-G 13952258-A-G **
4588178-G-T 4720137-G-T **
4582268-T-G 4714227-T-G **
4788893-C-T 4920852-C-T **
4571555-CT-C 4703514-CT-C **
4580710-C-A 4712669-C-A **
4862001-A-G 4993960-A-G **
4533603-T-G 4665562-T-G **
4478064-G-T 4610023-G-T **
16789649-C-A 14677769-C-A **
13714256-G-A 11558580-G-A **
4533592-A-G 4665551-A-G **
4697490-G-A 4829449-G-A **
6375633-TA-T 6507592-TA-T 9×A**
22951436-G-T 20789550-G-T ***
23418723-C-A 21256837-C-A ***
10916127-G-T ***
23599942-T-C 21438056-T-C ***
24201832-C-T 22055685-C-T P3_b1 ***
23277405-G-T 21115519-G-T ***
56831536-C-T ***
23280209-C-A 21118323-C-A ***
6490901-C-A 6622860-C-A ***
22881076-CTTT-C 20719190-CTTT-C 14×T***
56834450-TTCCATTCCATTCCCT-T,TTCCATTCCATTCCAC ***
14845268-CTTT-C 12733334-CTTT-C 15×T***
10673924-A-T ***
10023817-C-A 10186208-C-A ***
10682517-C-T ***
23299811-T-C 21137925-T-C ***
23006952-G-A 20845066-G-A ***
13483195-C-A 11327519-C-A ***
13488918-C-A 11333242-C-A ***
24518684-G-A 22372537-G-A ***
19152258-C-A 17040378-C-A ***
23466152-C-T 21304266-C-T BY17095 Y32891 ***
22723762-C-A 20561876-C-A ***
23098815-TCAA-T,TAA 20936929-TCAA-T,TAA ***
22601190-G-T 20439304-G-T ***
24001279-A-G 21855132-A-G ***
56832846-G-GTCCATTCCAT ***
13449197-GAAATC-G 11293521-GAAATC-G ***
23810747-G-T 21648861-G-T ***
23745455-G-A 21583569-G-A ***
58978691-T-C 56832544-T-C ***
17934203-TAA-T 15822323-TAA-T 13×A***
16909178-CTTT-C 14797298-CTTT-C 16×T***
22426874-G-T 20264988-G-T DYZ19 ***
10935579-C-CTCCATTCCAT ***
23059023-C-A 20897137-C-A ***
7460256-A-G 7592215-A-G CTS1522 IR1_L ***
28801362-C-G 26655215-C-G ***
7460231-A-G 7592190-A-G CTS1521 IR1_L ***
3546201-G-A 3678160-G-A ***
28801363-A-G 26655216-A-G ***
13141807-T-G 10631293-T-G ***
10814463-T-TATTCC ***
7970899-C-A 8102858-C-A ***
13488527-C-A 11332851-C-A ***
3728772-G-T 3860731-G-T ***
11668627-T-C ***
5957103-C-A 6089062-C-A ***
10846371-C-A ***
11017765-C-A ***
13194300-CA-C 11038624-CA-C ***
13194305-C-A 11038629-C-A ***
13482409-C-A 11326733-C-A ***
13483192-T-C 11327516-T-C ***
13504960-G-T 11349284-G-T ***
13697194-G-T 11541518-G-T ***
13806105-A-G 11685399-A-G ***
6830851-G-A 6962810-G-A ***
13823263-G-GAATGC 11702557-G-GAATGC ***
13826505-G-T 11705799-G-T ***
13832424-G-T 11711718-G-T ***
13847388-G-T 11726682-G-T ***
3728798-G-T 3860757-G-T ***
14080035-GATATATATAT-G,GATATATAT 11959329-GATATATATAT-G,GATATATAT 29×AT***
3603162-A-G 3735121-A-G ***
14324723-C-A 12204017-C-A ***
14395322-C-A 12274618-C-A ***
6795149-T-C 6927108-T-C ***
6882354-G-T 7014313-G-T ***
11668624-A-G ***
7222684-T-C 7354643-T-C ***
7933345-C-A 8065304-C-A ***
8112688-A-G 8244647-A-G ***
8365682-G-T 8497641-G-T ***
8453360-G-T 8585319-G-T ***
8453363-A-G 8585322-A-G ***
8658222-C-A 8790181-C-A ***
8699882-A-G 8831841-A-G ***
7334719-C-A 7466678-C-A ***
8983163-G-T 9145554-G-T ***
13710532-G-A 11554856-G-A ***
10669467-TC-T ***
9873460-C-A 10035851-C-A ***
9907173-G-T 10069564-G-T ***
9926416-C-T 10088807-C-T ***
9963131-T-C 10125522-T-C ***
7126024-C-A 7257983-C-A ***
10024272-G-T 10186663-G-T ***
10034277-C-T 10196668-C-T ***
7033574-A-G 7165533-A-G ***
6952865-C-A 7084824-C-A ***
2687864-C-A 2819823-C-A ***
14788675-A-T 12676746-A-T ***
15173782-CAA-C 13061868-CAA-C 13×A***
28801352-A-T 26655205-A-T ***
13869162-A-G 11748456-A-G ***
18614102-G-A 16502222-G-A ***
18722926-C-A 16611046-C-A ***
18903013-A-G 16791133-A-G ***
18949544-C-A 16837664-C-A ***
14379490-C-A 12258786-C-A ***
13194337-T-C 11038661-T-C ***
19264450-C-A 17152570-C-A ***
13869149-A-ATC 11748443-A-ATC 12×GAATG***
13811124-C-T 11690418-C-T ***
20865487-GTA-G,GTATA 18703601-GTA-G,GTATA P4_Dst 9×TA***
21076816-A-T 18914930-A-T ***
13842717-G-A 11722011-G-A ***
56831543-G-A ***
19266257-G-GAA 17154377-G-GAA 14×A***
21211958-G-T 19050072-G-T ***
21263356-C-A 19101470-C-A ***
21407401-G-C 19245515-G-C ***
21438785-TAAAAAAAAAAAAAAAAAAAAA-T 19276899-TAAAAAAAAAAAAAAAAAAAAA-T 31×A***
21455878-C-A 19293992-C-A ***
16305924-CAAA-C 14194044-CAAA-C 24×A***
17278273-CGAAAGAAAGAAA-C,CGAAA 15166393-CGAAAGAAAGAAA-C,CGAAA 16×GAAA***
14832218-G-A 12720285-G-A ***
16007795-G-A 13895915-G-A Y19482 ***
8385857-GA-G 8517816-GA-G 10×A***
11030214-A-G ***
19407710-C-A 17295830-C-A ***
13194312-T-G 11038636-T-G ***
15507994-G-A 13396114-G-A ***
8865998-G-T 8997957-G-T ***
27435850-CAAA-C 25289703-CAAA-C P1_Y2 15×A***
15746765-C-A 13634885-C-A ***
15880142-C-A 13768262-C-A ***
16228211-C-A 14116331-C-A ***
13194681-C-A 11039005-C-A ***
15114642-C-A 13002729-C-A ***
16555193-C-A 14443313-C-A ***
8053435-C-A 8185394-C-A ***
10789384-C-G ***
16707074-G-T 14595194-G-T ***
16860725-G-A 14748845-G-A ***
16971191-C-A 14859311-C-A ***
17869826-C-A 15757946-C-A ***
23834228-ATT-A 21672342-ATT-A 14×T***
9830501-C-T 9992892-C-T ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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