Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > Z195/S355 > Z198 > ZS312 > Z262 > M167 > Z264 > Z205 > ~22224168-A-C > Z206/S235 > Z208/S362 > Z207/S251 > CTS9762 > CTS4299

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
N42387
FGC
DKAUK
22687788-C-T 20525902-C-T FGC19167 YY++
19169690-T-C 17057810-T-C FGC19161 Y++
22808722-C-T 20646836-C-T FGC19136 SK1265 Y13464 YY++
7350611-T-C 7482570-T-C FGC19145 YY++
21455579-A-G 19293693-A-G FGC19164 YY+
21762324-T-C 19600438-T-C FGC19166 YY++
19439233-C-T 17327353-C-T FGC19163 YY++
19171616-A-G 17059736-A-G FGC19162 Y+*
19145007-G-T 17033127-G-T FGC19160 YY++
23632890-C-T 21471004-C-T FGC19169 YY++
17712124-G-T 15600244-G-T FGC19158 YY++
17351464-A-T 15239584-A-T FGC19156 YY++
15572607-G-A 13460727-G-A FGC19152 YY+*
15275568-G-C 13163657-G-C FGC19151 YY++
13665298-T-C 11509622-T-C FGC19150 ++
7649716-G-T 7781675-G-T FGC19147 YY++
23097230-G-C 20935344-G-C FGC19168 YY++
5275014-C-G 5406973-C-G L628 ++
7794433-T-G 7926392-T-G FGC19148 YY++
5247053-G-A 5379012-G-A FGC19143 ++
19014142-G-T 16902262-G-T FGC19159 Y+
17372028-A-G 15260148-A-G FGC19157 YY+
16981858-G-A 14869978-G-A FGC19155 YY+
16977929-A-C 14866049-A-C FGC19154 Y+
2800598-A-G 2932557-A-G FGC19137 YY++
15636336-G-A 13524456-G-A FGC19153 Y+
7440839-G-A 7572798-G-A FGC19146 Y+
16869354-CTTTG-C 14757474-CTTTG-C +**
6749865-A-G 6881824-A-G FGC19144 Y+
5180394-G-A 5312353-G-A FGC19142 +
4923348-G-A 5055307-G-A FGC19141 +
4292311-A-G 4424270-A-G FGC19140 +
3763546-A-G 3895505-A-G FGC19139 +
3269395-A-G 3401354-A-G FGC19138 +
9073616-C-A 9236007-C-A FGC19149 Y++
21577855-T-G 19415969-T-G FGC19165 Y*
13459722-G-A 11304046-G-A **
25995096-AAT-A 23848949-AAT-A P1_Y1 9×AT**
5434181-AT-A 5566140-AT-A **
9381376-A-AAC 9543767-A-AAC *****
10034680-C-A 10197071-C-A **
16396322-G-A 14284442-G-A **
14294201-G-A 12173495-G-A PF2507 **
17794158-TTTTCTTTCTTTC-T 15682278-TTTTCTTTCTTTC-T 12×TTTC**
20252796-C-CAAAA 18090910-C-CAAAA P5_Dst 24×A**
6489371-C-CAAAAAAAAAAA 6621330-C-CAAAAAAAAAAA 25×A**
21730548-ATTTTTTTT-A 19568662-ATTTTTTTT-A 23×T**
22341424-C-T 20179538-C-T DYZ19 **
28336668-C-CAAAAA 26190521-C-CAAAAA P1_b4 31×A**
8466194-AAAAT-A 8598153-AAAAT-A 11×AAAT**
21556919-C-CTTTTTTTTTTTTTTT 19395033-C-CTTTTTTTTTTTTTTT 23×T**
26902286-C-CAAAA 24756139-C-CAAAA P1_r3 34×A**
16526728-CATAAATAA-C 14414848-CATAAATAA-C 12×ATAA**
27461938-G-T 25315791-G-T P1_Y2 ***
27162715-G-A 25016568-G-A P1_g3 ***
27162734-G-T 25016587-G-T P1_g3 ***
27589460-G-T 25443313-G-T P1_Y2 ***
27162704-C-A 25016557-C-A P1_g3 ***
27162702-C-A 25016555-C-A P1_g3 ***
26730445-C-T 24584298-C-T P1_g2 ***
26270550-T-A 24124403-T-A P1_Y1 ***
24936472-G-C 22790325-G-C g1 ***
27517829-C-A 25371682-C-A P1_Y2 ***
13468809-CAAG-AAAC 11313133-CAAG-AAAC ***
27589470-A-T 25443323-A-T P1_Y2 ***
22504793-A-T 20342907-A-T DYZ19 ***
27616312-T-A 25470165-T-A P1_Y2 ***
27638086-G-A 25491939-G-A P1_Y2 ***
27638102-C-A 25491955-C-A P1_Y2 ***
27821921-A-T 25675774-A-T P1_Y2 ***
28096303-T-A 25950156-T-A P1_Y2 ***
28106249-C-T 25960102-C-T P1_Y2 ***
28253267-C-G 26107120-C-G P1_b4 ***
28371119-G-T 26224972-G-T P1_gr2 ***
58821131-G-C 56769740-C-G ***
58821135-C-T 56769736-G-A ***
26386480-C-CAAAAAA 24240333-C-CAAAAAA P1_Y1 20×A***
58830375-T-A 56760496-A-T ***
25709386-G-GTTTTTTTTT 23563239-G-GTTTTTTTTT P1_b3 31×T***
22636940-G-A 20475054-G-A ***
22471494-T-C 20309608-T-C DYZ19 ***
22504777-C-T 20342891-C-T DYZ19 ***
58882530-GTCCATTCCGTTCGAT-G 56708307-GGGAATCGAACGGAAT-G ***
22101030-C-T 19939144-C-T ***
22245379-C-A 20083493-C-A DYZ19 ***
22245647-T-G 20083761-T-G DYZ19 ***
22245651-T-C 20083765-T-C DYZ19 ***
22268242-T-A 20106356-T-A DYZ19 ***
22273608-G-A 20111722-G-A DYZ19 ***
22289754-T-C 20127868-T-C DYZ19 ***
22309728-C-T 20147842-C-T DYZ19 ***
22309853-C-A 20147967-C-A DYZ19 ***
22311267-T-A 20149381-T-A DYZ19 ***
22311490-G-T 20149604-G-T DYZ19 ***
22311511-C-A 20149625-C-A DYZ19 ***
22311533-T-A 20149647-T-A DYZ19 ***
22311559-G-A 20149673-G-A DYZ19 ***
22498980-T-C 20337094-T-C DYZ19 ***
58868432-CATTACATACG-C 56722425-GAATCGTATGT-G ***
58859848-CC-AG 56731022-GG-CT ***
28804542-TGAAAGCAACT-GGAATGGAATC 26658395-TGAAAGCAACT-GGAATGGAATC ***
22311563-T-A 20149677-T-A DYZ19 ***
22321107-A-C 20159221-A-C DYZ19 ***
22321134-G-A 20159248-G-A DYZ19 ***
22321144-G-T 20159258-G-T DYZ19 ***
22321150-C-G 20159264-C-G DYZ19 ***
28711545-G-GGT 26565398-G-GGT 21×GT***
22341822-C-T 20179936-C-T DYZ19 ***
22364719-G-T 20202833-G-T DYZ19 ***
22471482-A-T 20309596-A-T DYZ19 ***
24488353-G-GT 22342206-G-GT ***
22498964-A-C 20337078-A-C DYZ19 ***
24600442-CTCTTTCTTTCTTTCTTTCTTTCTT-C 22454295-CTCTTTCTTTCTTTCTTTCTTTCTT-C P3_t2 18×TCTT***
22366697-TTT-AGC 20204811-TTT-AGC DYZ19 ***
58831421-C-T 56759450-G-A ***
13711114-T-TAACCTGAACA 11555438-T-TAACCTGAACA 11×GAATG***
19528524-CAA-C 17416644-CAA-C 18×A***
18735674-C-CTTTTTT 16623794-C-CTTTTTT 24×T***
18028765-G-ATACAA 15916885-G-ATACAA ***
17718433-A-TTTTT 15606553-A-TTTTT ***
17323723-A-AGGGGGGGG 15211843-A-AGGGGGGGG ***
17004618-CAA-C 14892738-CAA-C 14×A***
16904731-A-AGTGTGTGTGTGTGT 14792851-A-AGTGTGTGTGTGTGT 20×GT***
15669964-C-CA 13558084-C-CA 18×A***
14784872-ATT-A 12672942-ATT-A 18×T***
14073187-C-CTTTTTTT 11952481-C-CTTTTTTT 27×T***
13813581-CGAATGGAATGGAATG-C 11692875-CGAATGGAATGGAATG-C 9×GAATG***
8599677-A-ATTTTTTTTT 8731636-A-ATTTTTTTTT 17×T***
13726499-GGAATA-G 11570823-GGAATA-G ***
13601041-AAAATTATATG-TATATCATA 11445365-AAAATTATATG-TATATCATA ***
20025478-T-TCCCCC 17913598-T-TCCCCC P5_Prx ***
8901991-C-CTTTTTT 9033950-C-CTTTTTT 19×T***
9303948-TG-CT 9466339-TG-CT ***
9854343-C-CTTTTTTT 10016734-C-CTTTTTTT 19×T***
9930280-TAGCCA-GAGCCG 10092671-TAGCCA-GAGCCG ***
9930392-TGGGCT-AGGGTG 10092783-TGGGCT-AGGGTG ***
13110184-CATAT-TATGG 10599670-CATAT-TATGG ***
13479851-AGTG-GGTC 11324175-AGTG-GGTC ***
13125911-GG-TC 10615397-GG-TC ***
13140074-GAGTG-CACTC 10629560-GAGTG-CACTC ***
13140080-GTGTG-ATTTT 10629566-GTGTG-ATTTT ***
13205594-AAATAT-A 11049918-AAATAT-A ***
13223457-AGGGA-GGGGG 11067781-AGGGA-GGGGG ***
13461724-TTATG-ATATT 11306048-TTATG-ATATT ***
5130497-G-GGTTTTTTTGGGGGT 5262456-G-GGTTTTTTTGGGGGT 24×T***
4848574-G-GTTTTTT 4980533-G-GTTTTTT 29×T***
58835877-C-T 56754994-G-A ***
58869539-C-T 56721332-G-A ***
22471304-TCTTTCTGG-CCCTTACGA 20309418-TCTTTCTGG-CCCTTACGA DYZ19 ***
13467173-AAAGA-CATGG 11311497-AAAGA-CATGG ***
58835884-C-T 56754987-G-A ***
58835893-T-A 56754978-A-T ***
58835897-G-T 56754974-C-A ***
58835904-T-G 56754967-A-C ***
58835908-T-A 56754963-A-T ***
58859180-G-T 56731691-C-A ***
58859182-C-A 56731689-G-T ***
58859848-C-A 56731023-G-T ***
22248366-ACAGAGTTTGTTCCTTCAGATGTTTC-A 20086480-ACAGAGTTTGTTCCTTCAGATGTTTC-A DYZ19 ***
22234440-TTTAAA-ATCAAG 20072554-TTTAAA-ATCAAG DYZ19 ***
58859849-C-G 56731022-G-C ***
58877015-G-A 56713856-C-T ***
20333835-C-CCCTAAAAAAA 18171949-C-CCCTAAAAAAA P5_Dst 24×A***
58877032-T-C 56713839-A-G ***
58880700-A-T 56710171-T-A ***
58885713-A-G 56705158-T-C ***
20355626-GG-CA 18193740-GG-CA P5_Dst ***
20355605-ACA-GTT 18193719-ACA-GTT P5_Dst ***
5017614-AAC-A 5149573-AAC-A 18×AC***
20355555-TTGAA-ATGAG 18193669-TTGAA-ATGAG P5_Dst ***
3615472-G-GA 3747431-G-GA 14×A***
21986512-C-CA 19824626-C-CA 9×A***
16865357-TTA-T 14753477-TTA-T ***
16730003-GAA-G 14618123-GAA-G 17×A***
3205858-C-CAAAA 3337817-C-CAAAA 15×A***
4675104-A-AT 4807063-A-AT 12×T***
2855467-A-AT 2987426-A-AT 16×T***
16138934-A-T 14027054-A-T P8_Dst ***
20989166-T-C 18827280-T-C P4_Dst ***
6934714-G-GT 7066673-G-GT 15×T***
9930387-A-G 10092778-A-G ***
9930397-T-G 10092788-T-G ***
13724925-C-G 11569249-C-G ***
22342970-TTA-GTC 20181084-TTA-GTC DYZ19 ***
17332750-C-CAAAA 15220870-C-CAAAA 22×A***
58830836-T-A 56760035-A-T ***
22421679-CCAGT-GCAGA 20259793-CCAGT-GCAGA DYZ19 ***
22326193-A-G 20164307-A-G DYZ19 ***
22498970-T-C 20337084-T-C DYZ19 ***
58848524-C-T 56742347-G-A ***
58975562-G-A 56829415-G-A ***
22962202-G-T 20800316-G-T ***
22364784-T-A 20202898-T-A DYZ19 ***
2807024-TTATATATA-T 2938983-TTATATATA-T 20×TA***
58913232-TGATG-GAATT 56677635-CATCA-AATTC ***
7717569-ACTTTCCTTTC-A 7849528-ACTTTCCTTTC-A 12×CTTTC***
13110171-T-G 10599657-T-G ***
58876473-A-T 56714398-T-A ***
6235469-C-G 6367428-C-G IR3_Dst ***
6276813-T-C 6408772-T-C IR3_Dst ***
19377260-A-G 17265380-A-G CTS10294 ***
19469886-C-A 17358006-C-A ***
22230169-G-T 20068283-G-T DYZ19 ***
22231965-CG-C 20070079-CG-C DYZ19 ***
22240310-C-A 20078424-C-A DYZ19 ***
22244213-A-T 20082327-A-T DYZ19 ***
22247321-A-C 20085435-A-C DYZ19 ***
22255299-C-G 20093413-C-G DYZ19 ***
22274764-C-T 20112878-C-T DYZ19 ***
13947521-G-GA 11826815-G-GA 13×A***
27517469-A-G 25371322-A-G P1_Y2 ***
24230940-T-C 22084793-T-C P3_b1 ***
10090424-C-T 10252815-C-T ***
22360155-G-A 20198269-G-A DYZ19 ***
22226518-C-A 20064632-C-A DYZ19 ***
13748477-A-G 11592801-A-G 6×GAATG***
13453840-CTCCAT-C 11298164-CTCCAT-C 10×TCCAT***
13472221-A-C 11316545-A-C ***
9689078-G-GT 9851469-G-GT IR3_Prx 15×T***
22251641-T-A 20089755-T-A DYZ19 ***
22420979-A-T 20259093-A-T DYZ19 ***
17564912-GA-G 15453032-GA-G 16×A***
19660405-G-A 17548525-G-A P5_Prx ***
22498439-T-G 20336553-T-G DYZ19 ***
22352923-C-A 20191037-C-A DYZ19 ***
10090420-A-T 10252811-A-T ***
20541612-C-T 18379726-C-T P5_Dst ***
13733942-G-C 11578266-G-C ***
22337206-C-G 20175320-C-G DYZ19 ***
58876431-T-A 56714440-A-T ***
13253210-TTT-C 11097534-TTT-C ***
9930237-G-C 10092628-G-C ***
13748498-G-A 11592822-G-A ***
5574077-CT-C 5706036-CT-C 19×T***
58844940-G-C 56745931-C-G ***
22504362-GGTTTCTGT-TGTCTCTTC 20342476-GGTTTCTGT-TGTCTCTTC DYZ19 ***
13462138-T-C 11306462-T-C ***
13489528-CCGCG-GCGCT 11333852-CCGCG-GCGCT ***
22309121-T-G 20147235-T-G DYZ19 ***
22310747-C-A 20148861-C-A DYZ19 ***
22355167-G-T 20193281-G-T DYZ19 ***
58872197-A-T 56718674-T-A ***
22316819-G-T 20154933-G-T DYZ19 ***
25015599-G-T 22869452-G-T g1 ***
20989164-T-C 18827278-T-C P4_Dst ***
23389531-C-CT 21227645-C-CT 18×T***
13479860-T-G 11324184-T-G ***
13696880-G-A 11541204-G-A ***
13696883-G-A 11541207-G-A ***
13696885-T-A 11541209-T-A ***
13744794-C-A 11589118-C-A ***
13748471-A-T 11592795-A-T ***
13748501-T-A 11592825-T-A ***
13748503-G-A 11592827-G-A ***
13940784-T-G 11820078-T-G ***
14441878-A-G 12321151-A-G ***
16067993-T-C 13956113-T-C ***
16138894-G-A 14027014-G-A P8_Dst ***
16138926-T-C 14027046-T-C P8_Dst ***
16138937-T-C 14027057-T-C P8_Dst ***
13467187-C-T 11311511-C-T ***
17239305-T-A 15127425-T-A ***
19660446-A-G 17548566-A-G P5_Prx ***
20103845-A-T 17991965-A-T P5_Dst ***
20355567-A-C 18193681-A-C P5_Dst ***
20355620-T-G 18193734-T-G P5_Dst ***
20355629-C-A 18193743-C-A P5_Dst ***
20435166-G-A 18273280-G-A P5_Dst ***
20564626-C-A 18402740-C-A P5_Dst ***
20564627-C-A 18402741-C-A P5_Dst ***
20564636-G-T 18402750-G-T P5_Dst ***
20564653-A-T 18402767-A-T P5_Dst ***
20894396-A-T 18732510-A-T P4_Dst ***
20926871-C-A 18764985-C-A P4_Dst ***
20989162-T-C 18827276-T-C P4_Dst ***
13467192-G-T 11311516-G-T ***
13467167-C-G 11311491-C-G ***
25028487-G-A 22882340-G-A g1 ***
7489700-G-T 7621659-G-T IR1_L ***
25308872-C-T 23162725-C-T P2_r1 ***
25311660-A-G 23165513-A-G P2_r1 ***
26604772-C-T 24458625-C-T P1_g2 ***
22245555-C-T 20083669-C-T DYZ19 ***
22245373-T-A 20083487-T-A DYZ19 ***
58824563-C-A 56766308-G-T ***
14565470-C-T 12453670-C-T ***
58882668-C-G 56708203-G-C ***
22308908-A-G 20147022-A-G DYZ19 ***
22308919-A-T 20147033-A-T DYZ19 ***
22308918-A-C 20147032-A-C DYZ19 ***
4257622-C-T 4389581-C-T ***
4257623-C-T 4389582-C-T ***
7359863-T-A 7491822-T-A ***
9303926-C-T 9466317-C-T ***
13333300-C-T 11177624-C-T ***
9303948-T-C 9466339-T-C ***
9303949-G-T 9466340-G-T ***
9930396-C-T 10092787-C-T ***
9930407-G-T 10092798-G-T ***
10034634-T-A 10197025-T-A ***
10034641-C-T 10197032-C-T ***
10090485-G-T 10252876-G-T ***
10090497-C-A 10252888-C-A ***
13109985-G-A 10599471-G-A ***
13110188-T-G 10599674-T-G ***
13110214-G-A 10599700-G-A ***
13222735-A-G 11067059-A-G ***
13222759-G-A 11067083-G-A ***
13222801-G-A 11067125-G-A ***
21730548-ATTTTTTTTT-A,AT 19568662-ATTTTTTTTT-A,AT 23×T***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: N423871045373275287067595045
Kit: DKAUK*16000000100000008300000
Used in age calculations16000000100000008300000
Counts of SNPs2619
Variant counts last updated 2017-11-05 23:07:11.

* BED data not available. Using default values.


Big Tree Main Page