Kane
FGC: B6564, FTDNA: B5163, Dante: 60820188481374Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FGC B6564 |
---|---|---|---|---|---|---|---|---|
3509040-T-C | 3640999-T-C | FGC29059 | + | |||||
4854202-T-G | 4986161-T-G | FGC29062 | + | |||||
7277873-C-G | 7409832-C-G | FGC29066 | Y | Y | + | |||
15855340-C-T | 13743460-C-T | FGC29070 | Y | + | ||||
22913194-C-T | 20751308-C-T | FGC29077 | Y | Y | + | |||
9393874-GA-G | 9556265-GA-G | + | ||||||
17857519-C-T | 15745639-C-T | CTS8162 | Y | * | ||||
10025176-G-A | 10187567-G-A | ** | ||||||
10025140-C-T | 10187531-C-T | ** | ||||||
59019553-A-C | 56873406-A-C | ** | ||||||
13432725-G-A | 11277049-G-A | ** | ||||||
28253491-C-CAAAAAA | 26107344-C-CAAAAAA | P1_b4 | 32×A | ** | ||||
9956830-T-C | 10119221-T-C | ** | ||||||
9956872-C-G | 10119263-C-G | ** | ||||||
22236596-A-T | 20074710-A-T | DYZ19 | ** | |||||
58998597-A-G | 56852450-A-G | ** | ||||||
10025156-C-T | 10187547-C-T | ** | ||||||
21556919-C-CTT | 19395033-C-CTT | 23×T | ** | |||||
22236571-T-A | 20074685-T-A | DYZ19 | ** | |||||
24387557-A-G | 22241410-A-G | ** | ||||||
5786608-C-CAAAA | 5918567-C-CAAAA | 20×A | ** | |||||
8901076-CATATAT-C | 9033035-CATATAT-C | 15×AT | ** | |||||
13470160-G-C | 11314484-G-C | *** | ||||||
22241464-A-T | 20079578-A-T | DYZ19 | *** | |||||
13721883-T-C | 11566207-T-C | DYZ17 | *** | |||||
13469730-C-T | 11314054-C-T | *** | ||||||
13469743-C-CT | 11314067-C-CT | *** | ||||||
13486243-T-C | 11330567-T-C | BY86167 | *** | |||||
13449696-CTCCAT-C | 11294020-CTCCAT-C | 11×TCCAT | *** | |||||
22421531-T-C | 20259645-T-C | DYZ19 | *** | |||||
25705290-A-T | 23559143-A-T | P1_b3 | 18×CT | *** | ||||
13479489-C-G | 11323813-C-G | *** | ||||||
5785678-AG-A | 5917637-AG-A | *** | ||||||
10043148-T-C | 10205539-T-C | FGC60512 | *** | |||||
13484795-T-C | 11329119-T-C | *** | ||||||
22341150-T-C | 20179264-T-C | DYZ19 | *** | |||||
22341153-T-A | 20179267-T-A | DYZ19 | *** | |||||
22352897-A-T | 20191011-A-T | DYZ19 | *** | |||||
22341773-G-T | 20179887-G-T | DYZ19 | *** | |||||
13482959-C-G | 11327283-C-G | *** | ||||||
13129502-T-C | 10618988-T-C | *** | ||||||
13129710-T-C | 10619196-T-C | *** | ||||||
13374277-G-C | 11218601-G-C | 13×A | *** | |||||
22236408-A-G | 20074522-A-G | DYZ19 | *** | |||||
22252712-G-T | 20090826-G-T | DYZ19 | *** | |||||
22337200-C-T | 20175314-C-T | DYZ19 | *** | |||||
22341694-T-G | 20179808-T-G | DYZ19 | *** | |||||
22341784-G-C | 20179898-G-C | DYZ19 | *** | |||||
22352457-G-A | 20190571-G-A | DYZ19 | *** | |||||
22352459-G-T | 20190573-G-T | DYZ19 | *** | |||||
22353416-G-T | 20191530-G-T | DYZ19 | *** | |||||
22360260-G-T | 20198374-G-T | DYZ19 | *** | |||||
22496079-G-T | 20334193-G-T | DYZ19 | *** | |||||
22503697-T-G | 20341811-T-G | DYZ19 | *** | |||||
58838379-G-C | 56752492-C-G | *** | ||||||
58840701-G-C | 56750170-C-G | *** | ||||||
58843776-G-A | 56747095-C-T | *** | ||||||
58885501-A-G | 56705370-T-C | *** | ||||||
58914221-T-C | 56676650-A-G | *** | ||||||
13470109-CA-TC | 11314433-CA-TC | *** | ||||||
9930334-CGGCT-TGGCG | 10092725-CGGCT-TGGCG | *** | ||||||
13129514-TAGGTTC-ATGGTAA | 10619000-TAGGTTC-ATGGTAA | *** | ||||||
22232055-ACAC-GCAT | 20070169-ACAC-GCAT | DYZ19 | *** | |||||
22236464-CCCACCAAGG-ACCAGTAAGT | 20074578-CCCACCAAGG-ACCAGTAAGT | DYZ19 | *** | |||||
22249354-GTGT-TTGA | 20087468-GTGT-TTGA | DYZ19 | *** | |||||
22257146-GAGTT-AAGTG | 20095260-GAGTT-AAGTG | DYZ19 | *** | |||||
22341149-CTTCTC-GCTCAT | 20179263-CTTCTC-GCTCAT | DYZ19 | *** | |||||
22341240-TAGAGTTTGT-CATTGTGTCC | 20179354-TAGAGTTTGT-CATTGTGTCC | DYZ19 | *** | |||||
22360592-GTGT-CTGG | 20198706-GTGT-CTGG | DYZ19 | *** | |||||
22367094-ATGG-CTGA | 20205208-ATGG-CTGA | DYZ19 | *** | |||||
22457231-CT-C | 20295345-CT-C | DYZ19 | *** | |||||
22480694-ATTAAAGT-CTTAAAGG | 20318808-ATTAAAGT-CTTAAAGG | DYZ19 | *** | |||||
28586775-CA-TG | 26440628-CA-TG | *** | ||||||
58844015-TATTCACTTCCATTTCC-T | 56746835-CGAATGGAAATGGAAGT-C | *** | ||||||
58885483-AGTC-TGTG | 56705385-GACT-CACA | *** | ||||||
59004689-TT-AA | 56858542-TT-AA | *** | ||||||
18892280-AT-TA | 16780400-AT-TA | *** | ||||||
58852098-G-A | 56738773-C-T | *** | ||||||
9930605-T-C | 10092996-T-C | *** | ||||||
13319855-T-C | 11164179-T-C | *** | ||||||
13734116-G-A | 11578440-G-A | DYZ17 | *** | |||||
19646325-G-T | 17534445-G-T | P5_Prx | *** | |||||
19646355-C-A | 17534475-C-A | P5_Prx | *** | |||||
22235037-A-T | 20073151-A-T | DYZ19 | *** | |||||
22266049-G-T | 20104163-G-T | DYZ19 | *** | |||||
22311188-T-C | 20149302-T-C | FT90099 | DYZ19 | *** | ||||
22341985-T-C | 20180099-T-C | DYZ19 | *** | |||||
22342017-G-T | 20180131-G-T | DYZ19 | *** | |||||
22365657-A-T | 20203771-A-T | DYZ19 | *** | |||||
22488395-C-G | 20326509-C-G | DYZ19 | *** | |||||
58833499-A-G | 56757372-T-C | *** | ||||||
58852068-C-T | 56738803-G-A | *** | ||||||
58872259-C-T | 56718612-G-A | 4×CCATT | *** | |||||
58872287-T-A | 56718584-A-T | *** | ||||||
58881944-T-A | 56708927-A-T | *** | ||||||
58881976-A-T | 56708895-T-A | *** | ||||||
58820252-TG-AT | 56770618-CA-AT | *** | ||||||
13316928-ATCCA-GTCCT | 11161252-ATCCA-GTCCT | *** | ||||||
22113187-C-CAAAAA | 19951301-C-CAAAAA | 23×A | *** | |||||
22297108-C-CT | 20135222-C-CT | DYZ19 | *** | |||||
22341971-AGA-TGG | 20180085-AGA-TGG | DYZ19 | *** | |||||
22341991-GATATTCTTCCTTTTG-CAGTTTATTTCTTCTT | 20180105-GATATTCTTCCTTTTG-CAGTTTATTTCTTCTT | DYZ19 | *** | |||||
58909736-CGATTCCTTTCCATTG-C | 56681113-TGGAATCCAATGGAAA-T | *** | ||||||
6093471-G-A | 6225430-G-A | *** | ||||||
10090739-A-C | 10253130-A-C | *** | ||||||
10090658-T-C | 10253049-T-C | *** | ||||||
10090675-G-T | 10253066-G-T | *** | ||||||
10090697-A-C | 10253088-A-C | *** | ||||||
13129514-T-A | 10619000-T-A | *** | ||||||
13129515-A-T | 10619001-A-T | *** | ||||||
13129519-T-A | 10619005-T-A | *** | ||||||
13129520-C-A | 10619006-C-A | *** | ||||||
13486262-G-A | 11330586-G-A | *** | ||||||
19604835-C-A | 17492955-C-A | P5_Prx | *** | |||||
22248516-A-C | 20086630-A-C | DYZ19 | *** | |||||
22250271-C-T | 20088385-C-T | DYZ19 | *** | |||||
22342588-T-G | 20180702-T-G | DYZ19 | *** | |||||
22352648-A-T | 20190762-A-T | DYZ19 | *** | |||||
22421442-C-G | 20259556-C-G | DYZ19 | *** | |||||
22421456-T-A | 20259570-T-A | DYZ19 | *** | |||||
22421560-C-A | 20259674-C-A | DYZ19 | *** | |||||
22481253-T-G | 20319367-T-G | DYZ19 | *** | |||||
58829066-T-A | 56761805-A-T | *** | ||||||
58843723-G-T | 56747148-C-A | *** | ||||||
58863395-T-C | 56727476-A-G | *** | ||||||
58911228-C-A | 56679643-G-T | *** | ||||||
13475916-ATAA-GTAG | 11320240-ATAA-GTAG | *** | ||||||
22421536-CAG-TAA | 20259650-CAG-TAA | DYZ19 | *** | |||||
22422023-ATGTC-TTGGT | 20260137-ATGTC-TTGGT | DYZ19 | *** | |||||
58894963-TACATTTGATGCCATC-T | 56695892-GGATGGCATCAAATGT-G | *** | ||||||
13484790-A-T | 11329114-A-T | *** | ||||||
13469234-T-G | 11313558-T-G | *** | ||||||
22268383-T-A | 20106497-T-A | DYZ19 | *** | |||||
13129498-G-C | 10618984-G-C | *** | ||||||
22268245-T-G | 20106359-T-G | DYZ19 | *** | |||||
22361131-A-C | 20199245-A-C | DYZ19 | *** | |||||
22361156-G-C | 20199270-G-C | DYZ19 | *** | |||||
58872410-T-G | 56718461-A-C | *** | ||||||
2759943-GGAGC-AGAGG | 2891902-GGAGC-AGAGG | *** | ||||||
13129498-GTGCT-CTGCC | 10618984-GTGCT-CTGCC | *** | ||||||
13483584-AC-A | 11327908-AC-A | *** | ||||||
22252883-ATGA-GTGT | 20090997-ATGA-GTGT | DYZ19 | *** | |||||
22292319-AGT-TAC | 20130433-AGT-TAC | DYZ19 | *** | |||||
22341141-GTG-ATT | 20179255-GTG-ATT | DYZ19 | *** | |||||
22341656-GA-AG | 20179770-GA-AG | DYZ19 | *** | |||||
22367160-GTCTT-TTCTG | 20205274-GTCTT-TTCTG | DYZ19 | *** | |||||
58907300-GATTCCATTCCATTCT-G | 56683545-AGGAATGGAATAGAAT-A | *** | ||||||
10090695-G-A | 10253086-G-A | *** | ||||||
58847681-T-G | 56743190-A-C | *** | ||||||
10090710-A-G | 10253101-A-G | *** | ||||||
13358612-G-A | 11202936-G-A | *** | ||||||
22245026-T-C | 20083140-T-C | DYZ19 | *** | |||||
22337234-G-A | 20175348-G-A | DYZ19 | *** | |||||
22337250-C-T | 20175364-C-T | DYZ19 | *** | |||||
22337286-G-C | 20175400-G-C | DYZ19 | *** | |||||
22366503-C-G | 20204617-C-G | DYZ19 | *** | |||||
22366546-G-A | 20204660-G-A | DYZ19 | *** | |||||
22366557-G-T | 20204671-G-T | DYZ19 | *** | |||||
24672340-A-G | 22526193-A-G | FGC40635 | P3_b2 | *** | ||||
26499688-C-T | 24353541-C-T | P1_Y1 | *** | |||||
26499707-C-G | 24353560-C-G | P1_Y1 | *** | |||||
28549346-C-A | 26403199-C-A | *** | ||||||
58838355-A-C | 56752516-T-G | *** | ||||||
58840562-G-A | 56750309-C-T | *** | ||||||
10022245-AGAGGC-GGAGCA | 10184636-AGAGGC-GGAGCA | *** | ||||||
22341673-AC-A | 20179787-AC-A | DYZ19 | *** | |||||
26499685-CTTC-TTTT | 24353538-CTTC-TTTT | P1_Y1 | *** | |||||
13478998-G-A | 11323322-G-A | *** | ||||||
22495773-TCCAA-CTTCAG | 20333887-TCCAA-CTTCAG | DYZ19 | *** | |||||
13292164-CA-G | 11136488-CA-G | *** | ||||||
13474828-A-G | 11319152-A-G | *** | ||||||
22352948-A-T | 20191062-A-T | DYZ19 | *** | |||||
22504829-T-G | 20342943-T-G | DYZ19 | *** | |||||
13470168-AG-CC | 11314492-AG-CC | *** | ||||||
13193952-N-NTCT | *** | |||||||
22352948-AC-TA | 20191062-AC-TA | DYZ19 | *** | |||||
22488373-TTTCTGGGAGTTTCG-CTTCAGGCAGGTTCA | 20326487-TTTCTGGGAGTTTCG-CTTCAGGCAGGTTCA | DYZ19 | *** | |||||
22263779-G-A | 20101893-G-A | DYZ19 | *** | |||||
13476003-T-G | 11320327-T-G | *** | ||||||
22226618-A-C | 20064732-A-C | DYZ19 | *** | |||||
22226623-A-C | 20064737-A-C | DYZ19 | *** | |||||
22335607-T-G | 20173721-T-G | DYZ19 | *** | |||||
22504827-T-G | 20342941-T-G | DYZ19 | *** | |||||
58844939-A-T | 56745932-T-A | *** | ||||||
58911360-G-A | 56679511-C-T | *** | ||||||
22481715-GA-G | 20319829-GA-G | DYZ19 | *** | |||||
10090738-A-G | 10253129-A-G | *** | ||||||
22292344-G-T | 20130458-G-T | DYZ19 | *** | |||||
22421841-T-G | 20259955-T-G | DYZ19 | *** | |||||
59007963-A-ACAAACAAACAAAC | 56861816-A-ACAAACAAACAAAC | *** | ||||||
13473607-G-A | 11317931-G-A | *** | ||||||
58882549-A-C | 56708322-T-G | *** | ||||||
9342865-T-G | 9505256-T-G | *** | ||||||
22354429-T-A | 20192543-T-A | DYZ19 | *** | |||||
22355259-G-T | 20193373-G-T | DYZ19 | *** | |||||
13308567-CGGG-TGGA | 11152891-CGGG-TGGA | *** | ||||||
13571778-TCC-GTG | 11416102-TCC-GTG | *** | ||||||
22226691-CAT-AAC | 20064805-CAT-AAC | DYZ19 | *** | |||||
27862535-T-TGAGA | 25716388-T-TGAGA | P1_Y2 | 22×GA | *** | ||||
27398709-C-T | 25252562-C-T | FGC28799 | P1_g3 | *** | ||||
22248698-A-C | 20086812-A-C | DYZ19 | *** | |||||
22335798-C-T | 20173912-C-T | DYZ19 | *** | |||||
58893246-G-A | 56697625-C-T | *** | ||||||
58890696-G-A | 56700175-C-T | *** | ||||||
22354254-T-A | 20192368-T-A | DYZ19 | *** | |||||
10025112-C-T | 10187503-C-T | FT255254 | *** | |||||
22481870-T-C | 20319984-T-C | DYZ19 | *** | |||||
13256666-A-C | 11100990-A-C | *** | ||||||
9930372-C-T | 10092763-C-T | *** | ||||||
9930349-C-G | 10092740-C-G | *** | ||||||
22504674-G-C | 20342788-G-C | DYZ19 | *** | |||||
22244924-GAG-AA | 20083038-GAG-AA | DYZ19 | *** | |||||
6147446-AT-A | 6279405-AT-A | IR3_Dst | 19×T | *** | ||||
22337261-TCTT-ACTA | 20175375-TCTT-ACTA | DYZ19 | *** | |||||
22341723-TTCT-GTCC | 20179837-TTCT-GTCC | DYZ19 | *** | |||||
58840442-CTTCCA-GTTGCATTTT | 56750424-TGGAAG-AAAATGCAAC | *** | ||||||
17474945-C-T | 15363065-C-T | 15×T | *** | |||||
22504450-T-C | 20342564-T-C | DYZ19 | *** | |||||
58844900-A-C | 56745971-T-G | *** | ||||||
58844956-G-C | 56745915-C-G | *** | ||||||
8575956-A-ATTTTTT | 8707915-A-ATTTTTT | 28×T | *** | |||||
22504440-TACTT-CACTC | 20342554-TACTT-CACTC | DYZ19 | *** | |||||
22352870-A-C | 20190984-A-C | DYZ19 | *** | |||||
22344833-T-G | 20182947-T-G | DYZ19 | *** | |||||
22344352-T-G | 20182466-T-G | DYZ19 | *** | |||||
22367198-C-A | 20205312-C-A | DYZ19 | *** | |||||
22367199-T-G | 20205313-T-G | DYZ19 | *** | |||||
58844920-G-C | 56745951-C-G | *** | ||||||
10090738-AA-GC | 10253129-AA-GC | *** | ||||||
13461950-TGGT-AGGC | 11306274-TGGT-AGGC | *** | ||||||
24643282-CA-C | 22497135-CA-C | P3_t2 | 28×A | *** | ||||
13616629-G-A | 11460953-G-A | *** | ||||||
22236529-A-C | 20074643-A-C | DYZ19 | *** | |||||
22421550-A-T | 20259664-A-T | DYZ19 | *** | |||||
22504467-T-G | 20342581-T-G | DYZ19 | *** | |||||
22504487-C-A | 20342601-C-A | DYZ19 | *** | |||||
13479052-AGAAC-GGAAT | 11323376-AGAAC-GGAAT | *** | ||||||
22366823-AG-GC | 20204937-AG-GC | DYZ19 | *** | |||||
22293093-G-A | 20131207-G-A | DYZ19 | *** | |||||
58823339-TC-T | 56767528-TG-T | *** | ||||||
9930387-A-G | 10092778-A-G | *** | ||||||
22422834-A-C | 20260948-A-C | DYZ19 | *** | |||||
13262766-CCCT-TGCC | 11107090-CCCT-TGCC | *** | ||||||
58862933-A-C | 56727938-T-G | *** | ||||||
6617230-T-C | 6749189-T-C | *** | ||||||
13444645-C-T | 11288969-C-T | *** | ||||||
13720106-G-T | 11564430-G-T | DYZ17 | *** | |||||
22422027-C-A | 20260141-C-A | DYZ19 | *** | |||||
24539539-A-G | 22393392-A-G | P3_t2 | *** | |||||
58842270-C-A | 56748601-G-T | *** | ||||||
58847794-A-C | 56743077-T-G | *** | ||||||
58848568-G-T | 56742303-C-A | *** | ||||||
58909249-T-C | 56681622-A-G | *** | ||||||
13734147-TC-GA | 11578471-TC-GA | DYZ17 | *** | |||||
58842288-ACAG-CCAT | 56748580-CTGT-ATGG | *** | ||||||
58848553-GT-TC | 56742317-AC-GA | *** | ||||||
58870585-TTAATTCGAG-CT | 56720277-CTCGAATTAA-AG | *** | ||||||
22364762-T-C | 20202876-T-C | DYZ19 | *** | |||||
58859232-G-C | 56731639-C-G | *** | ||||||
58907104-T-C | 56683767-A-G | *** | ||||||
59002952-T-C | 56856805-T-C | *** | ||||||
13864542-TATGTCATT-AATG | 11743836-TATGTCATT-AATG | DYZ17 | *** | |||||
13472933-A-T | 11317257-A-T | *** | ||||||
58828971-C-T | 56761900-G-A | *** | ||||||
58908501-C-A | 56682370-G-T | *** | ||||||
22365765-ACA-CCT | 20203879-ACA-CCT | DYZ19 | *** | |||||
9952729-A-T | 10115120-A-T | *** | ||||||
58843715-A-C | 56747156-T-G | *** | ||||||
13744999-C-T | 11589323-C-T | DYZ17 | *** | |||||
3561528-T-A | 3693487-T-A | *** | ||||||
13120287-A-T | 10609773-A-T | *** | ||||||
22481631-AG-TA | 20319745-AG-TA | DYZ19 | *** | |||||
22342624-A-T | 20180738-A-T | DYZ19 | *** | |||||
9403521-G-GTTTTTT | 9565912-G-GTTTTTT | 21×T | *** | |||||
22433304-T-C | 20271418-T-C | DYZ19 | *** | |||||
22328421-TA-CT | 20166535-TA-CT | DYZ19 | *** | |||||
22252895-CCTTA-TCTTC | 20091009-CCTTA-TCTTC | DYZ19 | *** | |||||
28802525-G-A | 26656378-G-A | *** | ||||||
13469249-C-A | 11313573-C-A | *** | ||||||
13469222-T-G | 11313546-T-G | *** | ||||||
13469217-T-C | 11313541-T-C | *** | ||||||
13469216-T-A | 11313540-T-A | *** | ||||||
13469218-G-A | 11313542-G-A | *** | ||||||
13486249-A-C | 11330573-A-C | BY86168 | *** | |||||
13486254-G-C | 11330578-G-C | *** | ||||||
19646334-T-C | 17534454-T-C | P5_Prx | *** | |||||
22231957-G-C | 20070071-G-C | DYZ19 | *** | |||||
58844858-C-T | 56746013-G-A | *** | ||||||
22421067-CT-GTG | 20259181-CT-GTG | DYZ19 | *** | |||||
23831252-C-CTTT | 21669366-C-CTTT | 26×T | *** | |||||
22364782-C-A | 20202896-C-A | DYZ19 | *** | |||||
13448633-GCATTCCATTCC-G | 11292957-GCATTCCATTCC-G | 13×CATTC | *** | |||||
7573180-G-A | 7705139-G-A | ZS7884 | *** | |||||
7573173-G-A | 7705132-G-A | *** | ||||||
24387541-C-T | 22241394-C-T | *** | ||||||
7573186-G-A | 7705145-G-A | *** | ||||||
13433889-T-G | 11278213-T-G | *** | ||||||
13460180-T-G | 11304504-T-G | *** | ||||||
3313559-C-A | 3445518-C-A | *** | ||||||
13256596-C-G | 11100920-C-G | *** | ||||||
4511122-T-C | 4643081-T-C | *** | ||||||
5949039-G-T | 6080998-G-T | *** | ||||||
22267324-A-G | 20105438-A-G | DYZ19 | *** | |||||
9930818-C-T | 10093209-C-T | *** | ||||||
22354740-T-C | 20192854-T-C | DYZ19 | *** | |||||
24387529-A-G | 22241382-A-G | *** | ||||||
3889321-T-C | 4021280-T-C | *** | ||||||
4150841-C-T | 4282800-C-T | *** | ||||||
4778012-C-A | 4909971-C-A | 16×A | *** | |||||
4881129-C-T | 5013088-C-T | *** | ||||||
6250207-T-G | 6382166-T-G | IR3_Dst | *** | |||||
6328464-G-A | 6460423-G-A | IR3_Dst | *** | |||||
6328549-C-A | 6460508-C-A | IR3_Dst | *** | |||||
7636027-T-A | 7767986-T-A | *** | ||||||
7985535-C-T | 8117494-C-T | *** | ||||||
9221712-T-C | 9384103-T-C | *** | ||||||
9310507-T-C | 9472898-T-C | *** | ||||||
9697730-C-A | 9860121-C-A | IR3_Prx | *** | |||||
9782877-C-T | 9945268-C-T | *** | ||||||
9783995-G-A | 9946386-G-A | *** | ||||||
9930823-C-T | 10093214-C-T | *** | ||||||
9930830-G-C | 10093221-G-C | *** | ||||||
9930843-C-G | 10093234-C-G | *** | ||||||
10090673-A-G | 10253064-A-G | *** | ||||||
10090681-A-G | 10253072-A-G | *** | ||||||
10090726-C-T | 10253117-C-T | *** | ||||||
10091156-C-G | 10253547-C-G | *** | ||||||
10091168-T-G | 10253559-T-G | *** | ||||||
13108433-A-T | 10597919-A-T | *** | ||||||
13108439-C-G | 10597925-C-G | *** | ||||||
13108447-G-C | 10597933-G-C | *** | ||||||
13108774-T-A | 10598260-T-A | *** | ||||||
13109460-A-T | 10598946-A-T | *** | ||||||
13120299-G-A | 10609785-G-A | *** | ||||||
13255722-A-G | 11100046-A-G | *** | ||||||
13357224-C-T | 11201548-C-T | *** | ||||||
13467497-C-T | 11311821-C-T | *** | ||||||
13472119-G-A | 11316443-G-A | *** | ||||||
13478336-C-A | 11322660-C-A | *** | ||||||
13488966-G-T | 11333290-G-T | *** | ||||||
13553672-G-A | 11397996-G-A | 12×A | *** | |||||
13723590-A-T | 11567914-A-T | DYZ17 | 4×GGAAT | *** | ||||
13728363-C-T | 11572687-C-T | DYZ17 | *** | |||||
14609709-C-T | 12497911-C-T | *** | ||||||
15350325-G-T | 13238444-G-T | *** | ||||||
15641047-C-T | 13529167-C-T | *** | ||||||
18010541-G-A | 15898661-G-A | P7_Dst | *** | |||||
18446775-A-G | 16334895-A-G | P6_Dst | *** | |||||
19643788-T-C | 17531908-T-C | P5_Prx | *** | |||||
19858655-G-A | 17746775-G-A | P5_Prx | *** | |||||
19858656-G-A | 17746776-G-A | P5_Prx | *** | |||||
19917565-G-T | 17805685-G-T | P5_Prx | *** | |||||
19917573-A-T | 17805693-A-T | P5_Prx | *** | |||||
19917581-C-T | 17805701-C-T | P5_Prx | *** | |||||
20118218-C-T | 18006338-C-T | P5_Dst | *** | |||||
20118230-A-G | 18006350-A-G | P5_Dst | *** | |||||
20118234-C-T | 18006354-C-T | P5_Dst | *** | |||||
20118236-A-T | 18006356-A-T | P5_Dst | *** | |||||
20262448-G-A | 18100562-G-A | P5_Dst | *** | |||||
20262458-C-T | 18100572-C-T | P5_Dst | *** | |||||
20465042-G-A | 18303156-G-A | P5_Dst | *** | |||||
20580028-A-T | 18418142-A-T | P5_Dst | *** | |||||
20943486-T-G | 18781600-T-G | P4_Dst | *** | |||||
20943490-T-G | 18781604-T-G | P4_Dst | *** | |||||
20979273-A-G | 18817387-A-G | P4_Dst | *** | |||||
20979293-A-G | 18817407-A-G | P4_Dst | *** | |||||
22224319-C-T | 20062433-C-T | DYZ19 | *** | |||||
22224320-A-G | 20062434-A-G | DYZ19 | *** | |||||
22224322-T-G | 20062436-T-G | DYZ19 | *** | |||||
22224324-A-G | 20062438-A-G | DYZ19 | *** | |||||
22226603-G-C | 20064717-G-C | DYZ19 | *** | |||||
22226607-A-G | 20064721-A-G | DYZ19 | *** | |||||
22226620-T-C | 20064734-T-C | DYZ19 | *** | |||||
22226621-G-A | 20064735-G-A | DYZ19 | *** | |||||
22227051-G-A | 20065165-G-A | DYZ19 | *** | |||||
22234338-G-C | 20072452-G-C | DYZ19 | *** | |||||
22235070-G-C | 20073184-G-C | DYZ19 | *** | |||||
22241295-C-A | 20079409-C-A | DYZ19 | *** | |||||
22248681-T-C | 20086795-T-C | DYZ19 | *** | |||||
22248691-G-T | 20086805-G-T | DYZ19 | *** | |||||
22264912-G-A | 20103026-G-A | DYZ19 | *** | |||||
22267310-C-T | 20105424-C-T | DYZ19 | *** | |||||
22267311-A-T | 20105425-A-T | DYZ19 | *** | |||||
22267319-C-A | 20105433-C-A | DYZ19 | *** | |||||
22267322-T-G | 20105436-T-G | DYZ19 | *** | |||||
22267330-A-G | 20105444-A-G | DYZ19 | *** | |||||
22274188-G-T | 20112302-G-T | DYZ19 | *** | |||||
22293085-A-C | 20131199-A-C | DYZ19 | *** | |||||
22332465-A-G | 20170579-A-G | DYZ19 | *** | |||||
22332475-A-C | 20170589-A-C | DYZ19 | *** | |||||
22337194-T-A | 20175308-T-A | DYZ19 | *** | |||||
22342527-C-A | 20180641-C-A | DYZ19 | *** | |||||
22342530-C-A | 20180644-C-A | DYZ19 | *** | |||||
22342531-A-C | 20180645-A-C | DYZ19 | *** | |||||
22342569-G-A | 20180683-G-A | DYZ19 | *** | |||||
22342629-T-G | 20180743-T-G | DYZ19 | *** | |||||
22344078-C-A | 20182192-C-A | DYZ19 | *** | |||||
22344100-T-C | 20182214-T-C | DYZ19 | *** | |||||
22344116-T-C | 20182230-T-C | DYZ19 | *** | |||||
22354598-T-A | 20192712-T-A | DYZ19 | *** | |||||
22354749-G-T | 20192863-G-T | DYZ19 | *** | |||||
22354760-A-G | 20192874-A-G | DYZ19 | *** | |||||
22433309-C-A | 20271423-C-A | DYZ19 | *** | |||||
22491219-C-G | 20329333-C-G | FGC27684 | DYZ19 | *** | ||||
22503559-T-C | 20341673-T-C | DYZ19 | *** | |||||
22504419-A-C | 20342533-A-C | DYZ19 | *** | |||||
22504458-C-G | 20342572-C-G | DYZ19 | *** | |||||
22532019-G-A | 20370133-G-A | *** | ||||||
24387585-A-G | 22241438-A-G | *** | ||||||
24862281-C-A | 22716134-C-A | IR1_R | *** | |||||
24895675-A-C | 22749528-A-C | g1 | *** | |||||
24926073-C-T | 22779926-C-T | g1 | *** | |||||
24926114-A-G | 22779967-A-G | g1 | *** | |||||
25542204-G-T | 23396057-G-T | P1_gr1 | *** | |||||
25542209-T-G | 23396062-T-G | P1_gr1 | *** | |||||
25542210-G-T | 23396063-G-T | P1_gr1 | 11×CT | *** | ||||
25542299-A-T | 23396152-A-T | P1_gr1 | *** | |||||
25747132-G-A | 23600985-G-A | P1_b3 | *** | |||||
25747133-T-G | 23600986-T-G | P1_b3 | *** | |||||
26070770-G-A | 23924623-G-A | P1_Y1 | *** | |||||
26140900-A-T | 23994753-A-T | P1_Y1 | *** | |||||
26499685-C-T | 24353538-C-T | P1_Y1 | *** | |||||
26499746-T-C | 24353599-T-C | P1_Y1 | *** | |||||
26699376-G-T | 24553229-G-T | P1_g2 | *** | |||||
27405180-T-C | 25259033-T-C | P1_g3 | *** | |||||
27405186-C-T | 25259039-C-T | P1_g3 | *** | |||||
27462492-C-A | 25316345-C-A | P1_Y2 | *** | |||||
27575441-A-T | 25429294-A-T | P1_Y2 | *** | |||||
27575488-G-A | 25429341-G-A | P1_Y2 | *** | |||||
27575490-T-C | 25429343-T-C | P1_Y2 | *** | |||||
27835969-T-A | 25689822-T-A | P1_Y2 | *** | |||||
27952058-A-C | 25805911-A-C | P1_Y2 | *** | |||||
28404469-T-C | 26258322-T-C | P1_gr2 | *** | |||||
28416105-G-A | 26269958-G-A | P1_gr2 | *** | |||||
58820451-A-C | 56770420-T-G | *** | ||||||
58842266-A-T | 56748605-T-A | *** | ||||||
58842303-A-C | 56748568-T-G | *** | ||||||
58842839-T-C | 56748032-A-G | *** | ||||||
58842854-C-G | 56748017-G-C | *** | ||||||
58842905-C-T | 56747966-G-A | *** | ||||||
58844888-A-T | 56745983-T-A | *** | ||||||
58847806-C-A | 56743065-G-T | *** | ||||||
58859202-C-A | 56731669-G-T | *** | ||||||
58867456-G-A | 56723415-C-T | *** | ||||||
58872945-C-A | 56717926-G-T | *** | ||||||
58873020-A-C | 56717851-T-G | *** | ||||||
58873021-T-C | 56717850-A-G | *** | ||||||
58890126-A-C | 56700745-T-G | *** | ||||||
58890131-A-C | 56700740-T-G | *** | ||||||
58890431-T-C | 56700440-A-G | *** | ||||||
58890437-C-A | 56700434-G-T | *** | ||||||
58892133-T-C | 56698738-A-G | *** | ||||||
58904147-G-C | 56686724-C-G | *** | ||||||
58904156-T-C | 56686715-A-G | *** | ||||||
58907125-A-C | 56683746-T-G | *** | ||||||
58907132-T-C | 56683739-A-G | *** | ||||||
58908546-T-G | 56682325-A-C | *** | ||||||
58908576-A-G | 56682295-T-C | *** | ||||||
58909250-G-A | 56681621-C-T | *** | ||||||
58913109-C-T | 56677762-G-A | *** | ||||||
9984959-AGG-GGA | 10147350-AGG-GGA | *** | ||||||
25524693-C-CTTT | 23378546-C-CTTT | P1_gr1 | 33×T | *** | ||||
28628505-TA-T | 26482358-TA-T | *** | ||||||
6929129-TTGC-T | 7061088-TTGC-T | *** | ||||||
17926560-G-AAA | 15814680-G-AAA | *** | ||||||
27808469-C-TT | 25662322-C-TT | P1_Y2 | *** | |||||
2759925-GGCG-TGCT | 2891884-GGCG-TGCT | *** | ||||||
3522968-T-TTA | 3654927-T-TTA | 24×A | *** | |||||
4880892-ATTTTT-A | 5012851-ATTTTT-A | 17×T | *** | |||||
5388261-TAAAAAA-T | 5520220-TAAAAAA-T | 18×A | *** | |||||
5757308-CAAAAAA-C | 5889267-CAAAAAA-C | 18×A | *** | |||||
6192615-AACATT-CACAGC | 6324574-AACATT-CACAGC | IR3_Dst | *** | |||||
6250219-CT-GC | 6382178-CT-GC | IR3_Dst | *** | |||||
7223194-CAAAAAAAA-C | 7355153-CAAAAAAAA-C | 22×A | *** | |||||
7451290-CTTTC-TTTTT | 7583249-CTTTC-TTTTT | IR1_L | *** | |||||
7451294-C-CTTTTT | 7583253-C-CTTTTT | IR1_L | 29×T | *** | ||||
8776547-C-CGATTTTTTTTTCT | 8908506-C-CGATTTTTTTTTCT | 24×T | *** | |||||
8826677-TC-AA | 8958636-TC-AA | *** | ||||||
8888375-C-CTTTT | 9020334-C-CTTTT | 25×T | *** | |||||
9221696-TAT-AGA | 9384087-TAT-AGA | *** | ||||||
9735605-G-GTTTTTTTT | 9897996-G-GTTTTTTTT | IR3_Prx | 30×T | *** | ||||
9952729-ATAGCCAGTT-TTTGTCAGGC | 10115120-ATAGCCAGTT-TTTGTCAGGC | *** | ||||||
10015112-CTCCT-TTCCC | 10177503-CTCCT-TTCCC | *** | ||||||
10019055-TGGGAAGGGGGTA-CGGGGAGGTGGTG | 10181446-TGGGAAGGGGGTA-CGGGGAGGTGGTG | *** | ||||||
10090673-ATG-GTT | 10253064-ATG-GTT | *** | ||||||
10090695-GCAATA-ACCATAGAT | 10253086-GCAATA-ACCATAGAT | *** | ||||||
10090702-GACC-G | 10253093-GACC-G | *** | ||||||
10090723-TCAC-CCAT | 10253114-TCAC-CCAT | *** | ||||||
10091160-GTCG-CTCA | 10253551-GTCG-CTCA | *** | ||||||
13142443-GCCAGTC-TG | 10631929-GCCAGTC-TG | *** | ||||||
13468995-TTGTA-CTGTT | 11313319-TTGTA-CTGTT | *** | ||||||
13470159-GG-CT | 11314483-GG-CT | *** | ||||||
13478348-AGG-TGC | 11322672-AGG-TGC | *** | ||||||
13482982-CCT-TAC | 11327306-CCT-TAC | *** | ||||||
13483502-C-CA | 11327826-C-CA | *** | ||||||
13488946-AG-CA | 11333270-AG-CA | *** | ||||||
13842626-TGGACC-T | 11721920-TGGACC-T | DYZ17 | *** | |||||
13842636-TGGAAAGGAAC-T | 11721930-TGGAAAGGAAC-T | DYZ17 | *** | |||||
15171226-C-CTTTTTTT | 13059312-C-CTTTTTTT | 19×T | *** | |||||
17054915-GTATA-G | 14943035-GTATA-G | 10×TA | *** | |||||
19646343-TTG-ATA | 17534463-TTG-ATA | P5_Prx | *** | |||||
19858655-GG-AA | 17746775-GG-AA | P5_Prx | *** | |||||
20118103-AG-TT | 18006223-AG-TT | P5_Dst | *** | |||||
20420960-TAA-T | 18259074-TAA-T | P5_Dst | 17×A | *** | ||||
21409460-C-CAAAAAAA | 19247574-C-CAAAAAAA | 30×A | *** | |||||
22236408-ATAC-GGAA | 20074522-ATAC-GGAA | DYZ19 | *** | |||||
22342028-CTTCAAGA-TTTC | 20180142-CTTCAAGA-TTTC | DYZ19 | *** | |||||
22342527-CCTCACTTCAAGAAAG-ACTACCTT | 20180641-CCTCACTTCAAGAAAG-ACTACCTT | DYZ19 | *** | |||||
22342557-ATTTAG-CCTTAC | 20180671-ATTTAG-CCTTAC | DYZ19 | *** | |||||
22342582-TA-AT | 20180696-TA-AT | DYZ19 | *** | |||||
22352651-T-TG | 20190765-T-TG | DYZ19 | *** | |||||
22480584-G-GT | 20318698-G-GT | DYZ19 | *** | |||||
22504501-GGCA-TGCG | 20342615-GGCA-TGCG | DYZ19 | *** | |||||
24235387-G-GTTTTTT | 22089240-G-GTTTTTT | P3_b1 | 29×T | *** | ||||
25080053-C-CAAAA | 22933906-C-CAAAA | g1 | 20×A | *** | ||||
25542209-TG-GT | 23396062-TG-GT | P1_gr1 | *** | |||||
25705290-ACTCT-TCTCG | 23559143-ACTCT-TCTCG | P1_b3 | 18×CT | *** | ||||
26310632-C-CT | 24164485-C-CT | P1_Y1 | 28×T | *** | ||||
27462468-CAA-C | 25316321-CAA-C | P1_Y2 | 19×A | *** | ||||
27833994-TGTTC-ATTCTA | 25687847-TGTTC-ATTCTA | P1_Y2 | *** | |||||
27834002-TA-T | 25687855-TA-T | P1_Y2 | *** | |||||
27834008-AAG-GAC | 25687861-AAG-GAC | P1_Y2 | *** | |||||
27834017-TGAAATTGTC-CAGATTTTTT | 25687870-TGAAATTGTC-CAGATTTTTT | P1_Y2 | *** | |||||
27897272-G-GGGCTC | 25751125-G-GGGCTC | P1_Y2 | *** | |||||
58823346-CCATT-C | 56767516-CAATG-C | *** | ||||||
58842318-GCC-CCA | 56748551-GGC-TGG | *** | ||||||
58872948-TC-T | 56717919-TG-T | *** | ||||||
58914499-AC-GT | 56676371-GT-AC | *** | ||||||
59024399-TGCACACACACACACACACAT-CGCACACACACACACACACACAC | 56878252-TGCACACACACACACACACAT-CGCACACACACACACACACACAC | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.