HIDE SNP NAMES

The Big Tree: R-ZZ40

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > Z195/S355 > Z272 > S450 > ZZ40

ZZ40 is in the grey palindromic region. There are 2 possible positions for this mutation, but only one has the actual mutation. In BigY VCF files it will show up as a rejected ZZ40_1.
ZZ40
ZZ40
FGC23342 Y9426
FGC23343 Y9432
BY13483
BY13485
FGC23347
FGC23349 Y9427
FGC23350 Y9428
FGC23351 Y9429
FGC23353 Y9087
FGC23355 Y9430
FGC23356 Y9088
FGC23359 Y10801
FGC23363 Y9431
BY13484
BY13486
FGC62825
FGC34259
FGC28370
FGC28372
FGC28373
FGC28374
FGC28375
FGC28376
FGC28378
FGC28379
FGC28380
FGC28368
FGC28381
Y74676
9206634-CT-C
FGC28377
FGC34251
FGC34252
FGC34253
FGC34254
FGC34255
FGC34256
FGC34257
FGC34258
FGC62822
FGC23344
FGC23345
FGC23346
9225634-AC-A
9256034-AAATT-A
FGC19339
FGC62823
FGC23348
FGC34261
FGC34262
FGC23352
FGC62824
FGC23354
FGC34263
FGC23357
FGC23358
FGC23360
FGC23361
FGC23362
FGC23364
FGC62826
FGC34264
S21184
Z419 PF5310 AM00135
FGC13557 Y14105
BY13487
FGC13563
FGC22861
FGC13550
FGC13547
FGC13552
FGC13553
FGC13556
FGC13561
FGC13565
FGC13569
BY32750
FGC13573
23187889-C-G
FGC13574
17580616-C-T
FT80674
7597940-C-G
FGC43319
FGC43321
FGC43322
FGC43324
FGC43325
FGC43326
FGC43328
FGC43329
FGC43330
FGC43332
FGC43333
FGC43335
FGC43337
15235815-AAGAG-A
FGC43340
FGC43341
Z33595
FGC43343
FGC43344
FGC43345
Y22943
Y22942
FGC43347
BY32751 Y79667
A7066
BY32732
BY32723
BY32724
BY32725
BY32726 Y83724
BY32728 Y86009
Y91346 BY32735
Y91927 BY32736
BY32737
Y98418 BY32739
Y99649 BY32740
BY32741 Y100658
BY32743 Y106391
BY32744 Y106884
BY32745 Y107156
BY32746 Y107562
Y113435 BY32752
Y113460 BY32753
BY32731
Y86202 BY32729
BY32730
BY32733
BY32738 Y97524
BY50830
S19290
S16785
20069574-T-C
ZZ74
S15337
ZZ75
BY21030
BY21031
BY21032
Y96698
BY32575
BY32576 Y82202
Y82693
7112226-GAC-G
Y83823 BY32577
BY32578 Y84209
Y90394
BY32580 Y91903
13309522-CGG-C
Y95343 BY32581
Y95500 BY32582
BY32583 Y96478
Y97881
Y99047
Y100737 BY32584
BY32585 Y100738
15836102-CATTGG-C
BY32586 Y102902
BY32587 Y104123
17287630-GA-G
BY32588
BY32589 Y105278
Y108694 BY32590
BY32591
BY32592
BY32593 Y110535
Y110650 BY32594
FT56516
FT45843
FT87525
FT45673
Z3891
FT45824
FT45854
FT45863
FT46237
FT46384
FT46486
FT46504
BY32579 Y84987
FT46309
BY40199
BY40200
BY40201
20109663-TTAC-T
20109717-G-A
BY215224
BY215227
20109729-G-A
BY40202
20109753-G-C
BY40203
BY40204
BY53774
16086638-CT-C
BY33255
BY33256
BY33258
BY33261
BY33263
Y6610 Z19700
BY86647
BY89933
BY99221
BY142139
BY33238
BY33241
BY33248
BY33249
BY33254
BY33262
BY33267
BY161514
BY65800
BY71790
BY89938
BY93602
BY95868
BY99212
BY105192
BY106389
BY107958
BY108291
14408952-A-C
Z43276
Y15978
BY123431
BY125344
BY129878
BY135421
BY135735
BY136811
BY160884
BY160898
BY28445
BY28447
BY28448
BY160902
BY48035
26653820-CAA-C
BY63286
BY87574
BY43325
BY13116
BY43456
BY113781
BY43496
BY43534
BY43915
20327492-G-A
BY151187
BY42599
BY42729
9554175-A-G
BY43463
BY43621
BY152600
14231-A-G
BY152632
BY152693
BY152978
11686804-TGGA-T
BY153441
BY153442
11686812-AC-A
BY154006
FT77407
Y16854
Y17153
FT86772
Y17143 BY3276
Y17144 BY3277
Y17154 BY3278
BY13488
Y17147
Y16855
Y16857
Y17148
Y17149
Y17150
CTS7654
16310417-AG-A
Y17151
Y17152
Y17155
BY18982
BY33264
BY33266
Y17156
BY13489
BY13494
Y17157
BY33257
Y16856
BY33251
Y17146 BY3280
BY13491
Y17145
BY13490
BY13492 A13044
BY13493
BY33242
BY67953
BY33245
BY33246
BY33247
Y15476
BY33250
BY80577
BY88032
BY101542
14193210-TAAAG-T
BY33252
14307205-C-CA
BY117997
BY130550
BY136721
BY191945
Y11219 Z29649
Y11218 Z29650
Y11216 Z29651
Y11289 Z29652
CTS9050
Y11287 Z29653
Y11286 Z29654
Y11285
FT14458
PF7512 L566
Z29656
Z29657
PH312
Z29658
Z29659
Z29660
CTS2379
PH1354
ZS822
CTS3423
CTS4531
CTS4558
FT22296
Z29661
CTS8196
Z29662
Z29663
PH5341
Z29664
CTS5870
Y2491 FGC2094
Y11217
Y11288
Y11215
Y11880
BY3285
Knuckles
72190
Swift
N118186
Edgeworth
350317
Leinenbach
B6432 8Q7KV
Leinenbach
3QRRX
Canovas
E11427
Vincent
612257 612257
Ryon
N2640
Gibault
B2323 S2RNJ
Lehmann
514939
Lemay
B268088
Smargiassi
N163675
Penders
231236
Dyck
E25365
Otten
N126593 N126593
McKinnon
463559
Lummyus
B8062
Maness
65753
Maness
B122524
Bryan
650971 650971
Wood
N48992
Hazle
B257218
Binzer
802975
Cox
223805 223805
Danders
136884 136884
Bera
441400
Frew
IN62217
Gensse
N80344
Burke
716482
Burk
124720
Burk
364436 364436
McMann
B399075
Birks
248835
Burk
108969
Burke
B514577
Palmer
99668 99668
Jorgensen
B66194
Wade
IN21637 IN21637
Smith
556015
Jensen
B1442 B1442
Hansen
MI12852
Thondel
N30242
Lewis
N46299
Lewes
B188486
Ruggles
505044
Parker
148469
Kaas
B115991
Renaud
760012 760012
Kinsman
529536
1k Genomes
HG01765
Glasscock
325342 325342
Hjelt
193827 193827
Pesola
308908 308908
Hjelt
377534 377534
Karlsson
444326 444326
Fredrickson
12207
Larsson
521174 521174
Selby
258526
Jones
612725
Hamill
107709
Kohl
119325
Fisher
3762
Summerour
326402
Williams
251354
Graham
N253126
1k Genomes
HG01271
1k Genomes
HG01700
Laforga
B192666
1k Genomes
HG01524
Iriarte
N87857 N87857
Tranberg
113837
Unknown
388741
Dreimiller
266575

Overlay STR Data for an STR:

Colors for DYS715: 23 24 25


Porter
N28007
Oakes
H2290
Williamson
196041
A red background is used for men whose data has not yet been fully analyzed. His position on the tree is not yet final, and will in general be downstream of the current position. He may not be positive for all the SNPs/INDELs in the block he descends from.

Men whose NGS data have been fully analyzed are indicated with a grey background color.

Those men with a grey background and a pink bar to their left have been finalized, but haven't gone through as much scrutinity as earlier kits have. In particular, no search has been made for recurrent SNPs or other unusual mutations. For the vast majority of kits, this has no effect at all, but I will review them as necessary in the future.

CTS4296
22233413-G-A
Mutations written with a red background fall within a region of the Y chromosome, such as the palindromic region, which has left the position of the mutation ambiguous. The true mutation may be at the indicated position, or at any one of a number of alternate positions.

Z18068
SNP names which are bold grey indicates that their exact position on the tree is uncertain. This SNP may belong further upstream or all downstream branches may not be positive for it. This is often the case for SNPs found in FGC kits or 1kG kits in regions not covered by BigY tests.