HIDE SNP NAMES

The Big Tree: R-ZZ45

R-P312/S116 > Z40481 > ZZ11 > U152/S28 > ZZ45

ZZ45 is a SNP in the DYZ19 (125bp repeat) region. Unlike most SNPs, the exact position of this SNP is not known, but it may be 22299247. Examination of BAM files shows that there must be similar regions of DYZ19 and that ZZ45 could be in one of those other regions. NGS tests don't have read lengths long enough to distinguish the regions. It is clear that a mutation exists, but the exact position is currently unknown.

If one were to check a BAM file for this SNP, it would appear as a mixture of about 50% C reads and 50% G reads at position 22299247.

ZZ45
S206 Z36
Y3597 FGC6417
FGC6461
Y3577 FGC6418
Y3580 FGC6423
Y3610 FGC6427
Y3590 FGC8070
FGC6429 Y3591
Y3593 FGC6431
Y3594 FGC6433
FGC6412 Y3583
Y3581 FGC6424
FGC8071 Y3584
FGC6413 Y3585
FGC6414 Y3586
FGC6415 Y3587
FGC8069 Y3596
FGC6416
Y3608 FGC6411
FGC6419 Y3598
Y3599 FGC6420
Y3578 FGC6421
Y3582 FGC6425
Y3588 FGC8068
Y3589 FGC6426
Y3592 FGC6430
Y3595 FGC6435
FGC6422 Y3579
FGC6434 Y3609
A7970 BY1320
BY987 A7966
A7967 BY1522
BY1767 A7971
A7968 BY2061
A7972 BY2263
BY2105 A7969
BY843 A7974
A7975 BY1106
Z40624
CTS188
22218834-T-A
CTS4333
FGC43129 BY9458
CTS7958
FGC43130 BY9460
BY32374
YFS1111119 BY32361
YFS1111124 BY32362
BY32378
BY32379
YFS1111130 BY32363
FGC26181
YFS1111360 BY32364
14692849-AC-A
BY32383 Y51337
Y51621 BY32384
BY32385 Y51706
BY32386 Y52247
BY32387 Y53102
YFS1111384 BY32365
YFS1111385 A13172 BY32366
YFS1111387 BY32367
Y54338 BY32388
BY32389 Y55399
S22296
YFS1111396 BY32368
YFS1111402 BY32369
BY32390
YFS1111475 BY32370
BY32393 Y58504
YFS1111481 BY32371
BY4042 A12417
A7981
A7982
Y82002 BY32260
6124446-T-A
BY3551 BY4040
BY3553 BY4041
BY4043
Y85727 BY32269
Y86170 BY32271
Y86694 BY32272
M7154
A12418
Y96608 BY32285
Y96633
A12419
A12420
BY32291 Y100038
BY11761
A12421
A12422
BY32302 Y107587
BY32304
BY32305
BY32307 Y108933
Y110047 BY32309
Z29498
CTS5531 PF6636
S479 Z54
Z37
Z29494
Z29496
CTS8492
24455305-AG-A
CTS9981 PF7627
Z29491
Z29492
Z29493
Z38 S364
13499018-T-G
Z39 S478
CTS2162
Z70
PF7626
CTS8463
PH4380
CTS10470
Z29497
CTS10641
Z29499
Z67
CTS1595
Y16889 BY881
Y17162
PH2997 BY1328
Y17161
Y16885
BY31485
A8025
A8026
Y16884 ZS11513
Y16886
Y17163
Y16887
Y17164
Y17173
Y17174
14010375-ATAAC-A
Y17160
Y17165
Y16890
Y16891
Y17166
Y17167
Y17169
Y17216 A8027
Y17170
Y16893
Y17171
Y16894
CTS10568
Y17168
Y16895
A8028
A8029
Y17172
Y16896
Y17217
Y17159
Y16888
Y19716
18306393-G-A
25171927-A-G
FGC43713
FGC43717
FGC43716
Y19751
Y23841
Y24059
A8033
A8034
A8035
Y19410
Y19411
Y29591
Y29590
BY31490
Y29589
BY31489
Y33021
Y32082
BY32358
Y107098 BY32359
BY32360
Y108881 BY31491
A7992
A7993
Y24953
Y24962
Y24954
Y24955
8263081-TAG-T
Y24967
Y24957
Y24961
Y24958
Y24956
Y24521
15948904-GA-G
Y24959
Y24960
Y24963
Y24966
FGC71435 Y37966
S44 FGC71438
22258109-TC-T
Y24964
Y24965
BY16305
FGC71442
19972403-C-T
Y131126 BY32418
Y131135 BY32410
6111568-C-A
V2488
6146424-CTATA-C
BY9459
6104364-A-G
Y72556
S8024
A7983
S8033
A7984
9389521-CTG-C
A7985
A7986
A7987
A7988
A7989
24036776-T-C
24036778-A-G
24220907-C-CT
10006485-G-A
BY38843
BY38844
BY38845
7218633-G-A
A1773
BY38846
BY38847
BY3543
BY38848
BY38849
BY38850
BY38851
BY38852
BY38853
15224002-G-A
BY3849 A12516
BY38854
BY3850
BY3852
16551225-C-T
BY38855
BY3853
BY3857
BY38856
BY25652 Y99710
BY38857
BY38858
21546612-TC-T
22459189-G-C
22472437-G-C
FGC33754
BY38860
BY3858
BY3859
BY38861
23577100-A-ATTT
23766932-G-A
BY38862
BY3861
24220856-A-T
24444698-A-G
BY38863
BY38864
M9052
13735371-C-A
A274
A275
L1072
Y33053
Y32753
Y33062
Y32755
Y33054
Y33051
Y33052
Y33049
Z17173
13674451-T-A
Y32757
Y32758
Y33055
Y32759
Y33058
Y33059
Y33060
Y33056
Y32761
22444640-A-G
FGC6232
Y33057
Y33061
Y33050
Y38293
1k Genomes
NA12144
Mosimann
204013 JO1D9
Petzold
479075
1k Genomes
HG01060
Konther
E10249 4YD5U
Barriger
580306
Monnier
199556
Classon
B1802
Clason
44251
Hartman
498520
Woodford
193014
Winona
B55491 B55491
Kauffman
217575 217575
Kauffman
287362
unknown
B112228
1k Genomes
NA20538
1k Genomes
NA20798
1k Genomes
NA20803
1k Genomes
NA20806
Shelton
237227
Motes
393333 YF03956
Shaddock
407511
Shaddick
442039
Shaddick
452993
Shaddick
443452
Pomeroy
4128
Shattuck
508907
Shattuck
760912
Shadduck
459079
Shattuck
496614
Shaddock
556863
Shaddock
319642
Shaddock
424303
Hall
80144
Shattuck
462137
Shattock
563356
Shattuck
643353
Shattock
733203
Shaddock
272837
Parrish
N89266
Parrish
259094
Parrish
473254
Parrish
335060
Parrish
89212 89212
Parrish
381515
Mangan
522001
Parrish
365862
Byars
157493
Byars
B2814
Shaddock
430841
Shaddock
449054
Shattock
525693
Shattock
569988
Shattock
644491
Shattock
567117
Shattock
B194545
Shattock
577545
Shattock
713107
Strang
5825
Strong
9937
Strang
A6GYY
Arantes
431247
unknown
N160113
Sherk
51926
Fopulo
442801
Reimann
472254
Rupp
B30973
Shoultz
299727
Dixon
B1076
Quinton
541584
Strickler
80786
Fowler
138119
Brumby
N64186
Partti
411683 411683
Webb
315246
Nemo
520683
Baker
322472
1k Genomes
HG01383
1k Genomes
NA20512
Blank
166207
Prewitt
275841 275841
Staudt
N17830
Beck
357974
Beck
366432
Engelen
255498
Compton
357841
1k Genomes
NA19720
Bravo
188912
Jonsson
861890
Jonsson
681890

Overlay STR Data for an STR:


Porter
N28007
Oakes
H2290
Williamson
196041
A red background is used for men whose data has not yet been fully analyzed. His position on the tree is not yet final, and will in general be downstream of the current position. He may not be positive for all the SNPs/INDELs in the block he descends from.

Men whose NGS data have been fully analyzed are indicated with a grey background color.

Those men with a grey background and a pink bar to their left have been finalized, but haven't gone through as much scrutinity as earlier kits have. In particular, no search has been made for recurrent SNPs or other unusual mutations. For the vast majority of kits, this has no effect at all, but I will review them as necessary in the future.

CTS4296
22233413-G-A
Mutations written with a red background fall within a region of the Y chromosome, such as the palindromic region, which has left the position of the mutation ambiguous. The true mutation may be at the indicated position, or at any one of a number of alternate positions.